Commit 49539549 authored by Remi  PLANEL's avatar Remi PLANEL

use project_build

parent 8cb7d8f7
Pipeline #37089 failed with stages
in 5 minutes and 58 seconds
...@@ -167,17 +167,17 @@ export PGPASSWORD=${MINE_DB_PWD} ...@@ -167,17 +167,17 @@ export PGPASSWORD=${MINE_DB_PWD}
cd /home/intermine/intermine/mine-repo/${MINE_NAME} cd /home/intermine/intermine/mine-repo/${MINE_NAME}
echo "$(date +%Y/%m/%d-%H:%M) Running project_build script" echo "$(date +%Y/%m/%d-%H:%M) Running project_build script"
# ./project_build -v -b -T localhost /home/intermine/intermine/dump/dump ./project_build -v -b -T localhost /home/intermine/intermine/dump/dump
# ./gradlew --stop # ./gradlew --stop
echo "$(date +%Y/%m/%d-%H:%M) Gradle: clean" #>> /home/intermine/intermine/build.progress # echo "$(date +%Y/%m/%d-%H:%M) Gradle: clean" #>> /home/intermine/intermine/build.progress
./gradlew clean --stacktrace --no-daemon #>> /home/intermine/intermine/build.progress # ./gradlew clean --stacktrace --no-daemon #>> /home/intermine/intermine/build.progress
echo "$(date +%Y/%m/%d-%H:%M) Gradle: buildDB" #>> /home/intermine/intermine/build.progress # echo "$(date +%Y/%m/%d-%H:%M) Gradle: buildDB" #>> /home/intermine/intermine/build.progress
./gradlew buildDB --stacktrace --no-daemon #>> /home/intermine/intermine/build.progress # ./gradlew buildDB --stacktrace --no-daemon #>> /home/intermine/intermine/build.progress
echo "$(date +%Y/%m/%d-%H:%M) Gradle: integrate Lfallonii" #>> /home/intermine/intermine/build.progress # echo "$(date +%Y/%m/%d-%H:%M) Gradle: integrate Lfallonii" #>> /home/intermine/intermine/build.progress
./gradlew integrate --no-daemon -Psource=Lfallonii-gff,Lfallonii-chromosome-fasta,Lfallonii-protein-gene,Lfallonii-protein-fasta --debug # ./gradlew integrate --no-daemon -Psource=Lfallonii-gff,Lfallonii-chromosome-fasta,Lfallonii-protein-gene,Lfallonii-protein-fasta --debug
# echo "$(date +%Y/%m/%d-%H:%M) Gradle: integrate legioParis" #>> /home/intermine/intermine/build.progress # echo "$(date +%Y/%m/%d-%H:%M) Gradle: integrate legioParis" #>> /home/intermine/intermine/build.progress
......
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