Commit 7b087187 authored by Remi  PLANEL's avatar Remi PLANEL
Browse files

uncomment the different sources and post processes

parent 5133a362
......@@ -43,7 +43,7 @@
<property name="src.data.dir" location="/home/intermine/intermine/data/pre-process-data/genome/protein"/>
</source>
<!--
<source name="Lfallonii-gff" type="legiolist-gff" version="4.1.1">
<property name="gff3.taxonId" value="96230"/>
<property name="gff3.seqDataSourceName" value="LegioList Lfalloni"/>
......@@ -405,7 +405,7 @@
<property name="fasta.includes" value="LpPhila.faa"/>
<property name="src.data.dir" location="/home/intermine/intermine/data/pre-process-data/genome/protein"/>
</source>
-->
<!-- <source name="uniprot" type="uniprot">
......@@ -418,7 +418,7 @@
<property name="loadtrembl" value="true"/>
</source> -->
<!-- <source name="legiolist-homology" type="legiolist-homology" version="4.1.1">
<source name="legiolist-homology" type="legiolist-homology" version="4.1.1">
<property name="src.data.dir" location="/home/intermine/intermine/data/pre-process-data/"/>
<property name="src.data.dir.includes" value="table_orthos.txt"/>
<property name="legiolistTaxids" value="272624 297246 297245 400673 423212 1046632 661367 451 449 96230"/>
......@@ -442,7 +442,7 @@
<property name="src.data.dir" location="/home/intermine/intermine/data/pre-process-data"/>
<property name="pubmed.organisms" value="272624 297246 297245 400673 423212 1046632 661367 451 449 96230"/>
<property name="src.data.dir.includes" value="gene2pubmed"/>
</source> -->
</source>
<source name="update-publications" type="update-publications" dump="true">
<property name="src.data.file" location="publications.xml"/>
......@@ -453,12 +453,12 @@
<post-processing>
<post-process name="create-references"/>
<!-- <post-process name="create-chromosome-locations-and-lengths"/>
<post-process name="create-chromosome-locations-and-lengths"/>
<post-process name="do-sources" />
<post-process name="populate-child-features"/>
<post-process name="create-location-range-index"/>
<post-process name="create-overlap-view" />
<post-process name="create-search-index" /> -->
<post-process name="create-search-index" />
<post-process name="summarise-objectstore" />
<post-process name="create-autocomplete-index" />
<post-process name="transfer-sequences"/>
......
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