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title: Inspect
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title: Inspect
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In EpiCure, an event is a point (a cell at a given time point) that has been detected as potentially wrongly segmented/tracked and might need manual correction (suspect) or that corresponds to a cellular event (division, extrusion..).
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In EpiCure, an event is a point (a cell at a given time point) that has been detected as potentially wrongly segmented/tracked and might need manual correction (suspect) or that corresponds to a cellular event (division, extrusion..).
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Several features allows to detect possible segmentation/tracking errors and to display and navigate through these potential errors.
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Several features allows to detect possible segmentation/tracking errors and to display and navigate through these potential errors.
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| ... | @@ -107,21 +108,21 @@ Click on `Inspect track` to launch the analyse with the selected parameters. It |
... | @@ -107,21 +108,21 @@ Click on `Inspect track` to launch the analyse with the selected parameters. It |
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:round_pushpin: **Press <kbd>x</kbd> to show/hide the suspect points.**
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:round_pushpin: **Press <kbd>x</kbd> to show/hide the suspect points.**
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## Suspects layer
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## Events layer
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This layer contains points (shown as cross) placed at the center of each cell suspected of being not correctly segmented. Several features can be used to detect suspects, either from a static features [`Outliers options`]("outliers-options) or from analyzing the tracks [`Track options`](#track-options).
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This layer contains points (shown as cross) placed at the center of each cell suspected of being not correctly segmented. Several features can be used to detect suspects, either from a static features [`Outliers options`]("outliers-options) or from analyzing the tracks [`Track options`](#track-options). Cellular events are also displayed in this layer. Divisions are marked with blue circle by default.
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The score of the suspect is the number of suspicion (features) associated to that cell.
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The score of a suspicious event is the number of suspicion (features) associated to that cell.
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## Display options
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## Display options
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Use the interface `Display options` in the `Suspect` onglet (right panel) to change the display of the points (the size or the color).
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Use the interface `Display options` in the `Inspect` onglet (right panel) to change the display of the points (the size or the color).
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You can choose the reference feature for coloring the suspects. If a cell was suspected by the selected feature, the point will appear red, otherwise if the suspicion came from another feature, the point will appear white. The `score` feature shows the number of suspicions (features) associated to the cell from white (1) to bright red (maximum).
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You can choose the reference feature for coloring the events. If a cell was suspected by the selected feature, the point will appear red, otherwise if the suspicion came from another feature, the point will appear white. The `score` feature shows the number of suspicions (features) associated to the cell from white (1) to bright red (maximum).
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`Go to suspect` will zoom on the selected suspect (numbered in `Suspect n°` parameter) and print in the Terminal window why this point was flag has a possible segmentation mistake. :round_pushpin: **<kbd>Ctrl+Alt+Left click</kbd> on a point to zoom on it and displays suspicion information**
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`Go to event` will zoom on the selected event (numbered in `Event n°` parameter) and print in the Terminal window why this point was flag as a possible segmentation mistake or which cellular event it is. :round_pushpin: **<kbd>Ctrl+Alt+Left click</kbd> on a point to zoom on it and displays suspicion information**
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To directly navigate between suspects, :round_pushpin: **Press <kbd>Space</kbd> to move from one suspect to another**. The view will directly to go to the next suspect, zoom on it, and displays the information in the terminal.
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To directly navigate between suspects, :round_pushpin: **Press <kbd>Space</kbd> to move from one suspect to another**. The view will directly to go to the next suspect, zoom on it, and displays the information in the terminal. Other events (division) will be skipped.
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If the segmentation/tracking is in fact correct, you can remove the point by clicking on `Exonerate current suspect`. :round_pushpin: **<kbd>Ctrl+Alt+Right click</kbd> to remove the clicked point from suspect list**
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If the segmentation/tracking is in fact correct, you can remove the point by clicking on `Exonerate current event`. :round_pushpin: **<kbd>Ctrl+Alt+Right click</kbd> to remove the clicked point from event list**
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