Update Outputs authored by Gaëlle  LETORT's avatar Gaëlle LETORT
...@@ -86,7 +86,17 @@ A dotted vertical line in this panel indicates at which frame you are currently ...@@ -86,7 +86,17 @@ A dotted vertical line in this panel indicates at which frame you are currently
![temporal_area](uploads/5c56e966797a4ed305ae56122365ab72/temporal_area.png) ![temporal_area](uploads/5c56e966797a4ed305ae56122365ab72/temporal_area.png)
You can save either the current plot image by clicking the `save plot image` button, or the raw values used to do the plot (the x and y values, as a `.csv` file) with the `save plot data` button. Starting from version 0.2.6, temporal plots rely on `plotly` python library instead of `matplotlib` previously. This allows for more interactivity as you can zoom in/out, hover with the mouse on the curves to see the current value, select label(s) to display. However, the display is very slow for a large amount of lines to plot (if there are more than 2000 labels/cells). For simplicity, EpiCure will only display a random subset of the labels when this is the case but if you save the plot data, all data will be saved.
![tempplot](uploads/dbf8d9eb0ae9c1452f11741d52ddfe8d/tempplot.png)
### Saving temporal plot
You can save either the current plot image by clicking the `save plot image` button, or the raw values used to do the plot (the x and y values, as a `.csv` file) with the `save plot data` button. By default, the data are saved with one row by value (each row one label, one frame and the corresponding value of the plotted feature).
To save instead the data with one column for each label, select the option `Arranged data by label` in the bottom right of the plot interface (option available from EpiCure 0.2.6).
![plot_data](uploads/d894de0460fe0a3b6a8b1eb1f8237a6c/plot_data.png)
## Feature map ## Feature map
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