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Commit 7d41c57a authored by Gael MILLOT's avatar Gael MILLOT
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release v8.1.0: Display improvement. But still problem when using the option... 

release v8.1.0: Display improvement. But still problem when using the option -resume of nextflow run
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README.md
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## WHAT'S NEW IN
### v8.1.0
1) Display improvement. But still problem when using the option -resume of nextflow run.
### v8.0.0
1) Many things added.
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example_of_result/20220120_test_1648739032/reports/nf_trace.txt deleted 100644 → 0
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task_id hash native_id name status exit submit duration realtime %cpu peak_rss peak_vmem rchar wchar
1 6f/eca795 25430 init COMPLETED 0 2022-03-31 17:03:54.708 1.5s 11ms 9.6% 0 0 104.3 KB 676 B
3 93/1afcd6 25507 report1 COMPLETED 0 2022-03-31 17:03:54.824 1.5s 18ms 9.1% 0 0 104.6 KB 694 B
2 c4/0d6a9a 25456 Nremove (1) COMPLETED 0 2022-03-31 17:03:54.773 1.9s 445ms 55.2% 11.8 MB 70.6 MB 16.8 MB 14.5 MB
5 fd/de8dba 25971 backup COMPLETED 0 2022-03-31 17:03:56.242 1.4s 15ms 8.9% 0 0 104.5 KB 511 B
6 00/9df37c 26095 workflowVersion COMPLETED 0 2022-03-31 17:03:56.326 2.1s 809ms 13.9% 3.1 MB 19.2 MB 133.6 KB 2.1 KB
7 50/da806c 26183 trim (1) COMPLETED 0 2022-03-31 17:03:56.720 3.4s 2.2s 46.0% 39.8 MB 5.6 GB 16.4 MB 12 MB
10 fd/802f8e 26968 kraken (1) COMPLETED 0 2022-03-31 17:04:00.152 113ms 10ms 100.0% 0 0 151 KB 232 B
8 0e/1d67c7 26995 fivep_filtering (1) COMPLETED 0 2022-03-31 17:04:00.193 3.1s 2s 25.7% 9.6 MB 61.4 MB 28 MB 15.3 MB
11 ef/d7c743 27868 cutoff (1) COMPLETED 0 2022-03-31 17:04:03.357 1.9s 756ms 19.4% 9.7 MB 61.3 MB 7 MB 3.9 MB
9 1a/857eff 27077 fastqc1 (1) COMPLETED 0 2022-03-31 17:04:00.243 7.1s 6.2s 62.1% 161.1 MB 3.1 GB 13.9 MB 1.2 MB
12 e0/7fac93 27842 fastqc2 (1) COMPLETED 0 2022-03-31 17:04:03.325 6.1s 5.1s 101.0% 155.6 MB 3.1 GB 12.2 MB 1.2 MB
4 84/b98303 25582 motif COMPLETED 0 2022-03-31 17:03:55.086 18.3s 17.2s 49.7% 209.1 MB 407.3 MB 48.8 MB 39.7 MB
13 7c/5639a8 29115 plot_fivep_filtering_stat (1) COMPLETED 0 2022-03-31 17:04:13.442 12.4s 11.6s 58.2% 221.1 MB 431.9 MB 19.5 MB 812.8 KB
14 99/6a73c9 29827 bowtie2 (1) COMPLETED 0 2022-03-31 17:04:25.825 4.1s 3.3s 60.2% 111.4 MB 239.5 MB 35 MB 16.2 MB
16 af/90404d 30250 Q20 (1) COMPLETED 0 2022-03-31 17:04:29.948 1.5s 345ms 20.2% 6.6 MB 43.3 MB 3.2 MB 2.2 MB
19 8c/2da1ec 30787 no_soft_clipping (1) COMPLETED 0 2022-03-31 17:04:32.424 1.4s 279ms 14.4% 3.4 MB 38.4 MB 2.1 MB 1.5 MB
20 ab/cdafe5 30809 duplicate_removal (1) COMPLETED 0 2022-03-31 17:04:32.446 3s 1.8s 25.6% 7.3 MB 53 MB 12.8 MB 6.6 MB
18 42/655fdc 30278 multiQC COMPLETED 0 2022-03-31 17:04:29.968 8.2s 7s 44.6% 74.9 MB 85.3 MB 28.3 MB 2.3 MB
23 8a/646da5 31877 insertion (1) COMPLETED 0 2022-03-31 17:04:36.414 1.8s 576ms 18.9% 9 MB 65.7 MB 2.5 MB 1.7 MB
24 28/29354e 31897 insertion (2) COMPLETED 0 2022-03-31 17:04:36.434 1.8s 645ms 20.8% 9 MB 65.6 MB 3 MB 2.2 MB
15 d9/a8e66d 30214 plot_read_length (1) COMPLETED 0 2022-03-31 17:04:29.907 15.3s 14.4s 57.2% 181.8 MB 417.7 MB 20 MB 712.6 KB
17 3b/734529 32683 coverage (1) COMPLETED 0 2022-03-31 17:04:45.263 1.5s 613ms 21.4% 5.2 MB 44.6 MB 479.8 KB 91 KB
21 97/f8a58e 373 coverage (2) COMPLETED 0 2022-03-31 17:04:46.781 1.4s 581ms 19.9% 5.1 MB 44.6 MB 335.2 KB 82.4 KB
22 c8/fc33e9 525 coverage (3) COMPLETED 0 2022-03-31 17:04:48.221 1.5s 599ms 18.7% 5.1 MB 44.6 MB 310.4 KB 82.1 KB
25 4f/c6909d 679 final_insertion_files (1) COMPLETED 0 2022-03-31 17:04:49.693 6.6s 5.8s 41.7% 133.7 MB 331.8 MB 18.4 MB 318.2 KB
32 ef/f1255d 1139 report3 (1) COMPLETED 0 2022-03-31 17:04:56.277 1s 32ms 11.8% 0 0 177 KB 535 B
26 5b/ebbc79 1114 final_insertion_files (2) COMPLETED 0 2022-03-31 17:04:56.252 6.9s 6s 40.5% 133.5 MB 331.8 MB 18.4 MB 318.2 KB
27 24/9bba30 1685 plot_coverage (1) COMPLETED 0 2022-03-31 17:05:03.142 12.3s 11.6s 56.9% 227.6 MB 438.8 MB 19.5 MB 460.6 KB
28 cb/a8d85a 2393 plot_coverage (2) COMPLETED 0 2022-03-31 17:05:15.433 12.2s 11.5s 57.4% 226.6 MB 438.7 MB 19.5 MB 454.7 KB
29 bf/12608d 3100 plot_coverage (3) COMPLETED 0 2022-03-31 17:05:27.643 12.3s 11.5s 57.8% 226.8 MB 438.5 MB 19.5 MB 455.3 KB
30 af/61f927 3809 seq_around_insertion (1) COMPLETED 0 2022-03-31 17:05:39.933 6.4s 5.7s 42.1% 133 MB 331.7 MB 18.4 MB 229.5 KB
31 e5/b0fb17 4240 random_insertion (1) COMPLETED 0 2022-03-31 17:05:46.373 10.2s 9.5s 53.2% 369.9 MB 577.1 MB 31.2 MB 1.2 MB
33 75/93386b 4891 seq_around_insertion (2) COMPLETED 0 2022-03-31 17:05:56.563 6.5s 5.8s 41.1% 133.1 MB 331.7 MB 18.4 MB 163.4 KB
34 bb/2d4ff5 5337 dup_insertion_and_logo (1) COMPLETED 0 2022-03-31 17:06:03.082 12.6s 11.8s 60.3% 210.4 MB 454.6 MB 17.9 MB 526.7 KB
35 1c/b5db60 6064 extract_seq (1) COMPLETED 0 2022-03-31 17:06:15.711 1.7s 849ms 18.3% 5.8 MB 50.2 MB 9.1 MB 4.5 MB
40 62/fda639 6273 base_freq (3) COMPLETED 0 2022-03-31 17:06:17.426 1.3s 105ms 9.9% 0 0 282.7 KB 19.7 KB
41 e4/e84f46 6349 base_freq (4) COMPLETED 0 2022-03-31 17:06:17.476 1.4s 98ms 12.4% 0 0 282.1 KB 19 KB
38 5a/99f3f0 6383 base_freq (1) COMPLETED 0 2022-03-31 17:06:17.495 1.4s 96ms 12.4% 0 0 279.8 KB 16.8 KB
39 2c/f65318 6790 base_freq (2) COMPLETED 0 2022-03-31 17:06:18.783 1.1s 59ms 14.6% 0 0 281.9 KB 18.9 KB
36 e5/578def 6257 plot_insertion (1) COMPLETED 0 2022-03-31 17:06:17.404 3m 48s 3m 47s 30.4% 1.1 GB 1.3 GB 59.1 MB 17.7 MB
37 07/5d51df 11001 extract_seq (2) COMPLETED 0 2022-03-31 17:10:05.393 1.4s 461ms 19.8% 5.8 MB 50.2 MB 9 MB 4.5 MB
48 6d/9d5a86 11236 base_freq (6) COMPLETED 0 2022-03-31 17:10:06.784 1.4s 48ms 12.4% 0 0 178.7 KB 5.1 KB
49 ed/7cdd2b 11304 base_freq (7) COMPLETED 0 2022-03-31 17:10:06.830 1.6s 43ms 15.4% 0 0 176.4 KB 2.8 KB
47 73/1359e2 11332 base_freq (5) COMPLETED 0 2022-03-31 17:10:06.848 1.5s 45ms 12.8% 0 0 182.5 KB 8.9 KB
50 56/5e73bf 11747 base_freq (8) COMPLETED 0 2022-03-31 17:10:08.235 989ms 29ms 18.2% 0 0 180.6 KB 7 KB
51 c8/6c6907 11999 report2 COMPLETED 0 2022-03-31 17:10:10.236 878ms 33ms 9.4% 0 0 131.9 KB 2 KB
42 92/de85db 11214 logo (1) COMPLETED 0 2022-03-31 17:10:06.752 7.9s 6.9s 44.0% 182.9 MB 393.6 MB 15.1 MB 894.6 KB
43 0f/9d4354 12360 logo (2) COMPLETED 0 2022-03-31 17:10:14.701 7.3s 6.6s 45.9% 183.2 MB 394 MB 15.1 MB 904.1 KB
44 88/8395f8 12848 logo (3) COMPLETED 0 2022-03-31 17:10:22.032 7.3s 6.6s 46.4% 184.9 MB 395.7 MB 15.1 MB 1023.2 KB
45 8b/361a68 13336 logo (4) COMPLETED 0 2022-03-31 17:10:29.352 7.4s 6.7s 45.5% 182.7 MB 393.4 MB 15.1 MB 874 KB
46 d6/2df0ec 13826 goalign (1) COMPLETED 0 2022-03-31 17:10:36.802 1.1s 484ms 23.4% 5 MB 697.5 MB 128.2 KB 347.8 KB
52 00/82c468 13988 global_logo (1) COMPLETED 0 2022-03-31 17:10:37.932 7.7s 7s 48.7% 178.7 MB 390.5 MB 15.1 MB 867.7 KB
53 d5/1aa350 14481 global_logo (2) COMPLETED 0 2022-03-31 17:10:45.641 7.7s 7s 48.7% 181.6 MB 392.5 MB 15.1 MB 988.1 KB
54 56/676e30 14980 print_report (1) COMPLETED 0 2022-03-31 17:10:53.694 11.1s 10.4s 41.5% 241.2 MB 1 TB 45.4 MB 20.8 MB
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