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release v8.5.0: Some figures corrected, computations of number of insertions also and the duplicated part is now ok

release v8.1.0: Display improvement. But still problem when using the option -resume of nextflow run

Version v8.0.0: Operational version for Ecoli. But Warning: still problem when using the option -resume of nextflow run, notably including a wrong figure 38, because of all the code between processes in the main.nf file that are not controled by the cache system

Warning: with resume, the figure 38 is not the good one taken -> problem with the cache. Otherwise, goalign added. Remains to create empty png from gogalign and to insert into the markdown

v7.10.0 release: Pointing to the singularity folder improved, new option slurm_local added better worflow report

Added kraken run + multiqc

See merge request !7

Dev report

See merge request !6

Update plot_read_length.R

See merge request !4

Update plot_fivep_filtering_stat.R

See merge request !3

Update plot_coverage.R

See merge request !2

Update plot_insertion.R

See merge request !1