diff --git a/README.md b/README.md index b893b21e159ac086bf475cf08bb1f887e33398e9..1b2d6e6239dbf34588c8ea444151e0ecd953c3e7 100644 --- a/README.md +++ b/README.md @@ -199,10 +199,16 @@ Hub-CDB and Institut Pasteur <br /><br /> ## WHAT'S NEW IN +### v18.0.0 + +1) S:K417N position added as critical because of https://www.reuters.com/business/healthcare-pharmaceuticals/what-is-delta-variant-coronavirus-with-k417n-mutation-2021-06-23/ + + ### v17.0.0 1) scan() improved to be adapted to any header of fasta file + ### v16.0.0 1) New critical_pos.txt file format diff --git a/dataset/20210603_critical_pos.txt b/dataset/20210626_critical_pos.txt similarity index 93% rename from dataset/20210603_critical_pos.txt rename to dataset/20210626_critical_pos.txt index eb5ab448ef6cf6ad8d630f900d51a3c5c5a7bf2a..96053f2e793e7660c73529f392aed8fe0c99e9a5 100644 --- a/dataset/20210603_critical_pos.txt +++ b/dataset/20210626_critical_pos.txt @@ -1,6 +1,7 @@ # GATK positions for the deletions chr begin_pos end_pos codon_ref orf name ini_concern_name MN908947_Ampliseq 21563 21565 ACA S S:T19 S:T19R +MN908947_Ampliseq 22757 22759 AAG S S:K417 S:K417N MN908947_Ampliseq 22826 22828 AAT S S:N440 S:N440K MN908947_Ampliseq 22862 22864 CTG S S:L452 S:L452R MN908947_Ampliseq 22937 22939 AGC S S:S477 S:S477N