Statistical-Genetics

A cookie cutter for the genetic statistics unit

Simulation study to determine the impact of summary statistic imputation on a meta-analysis

A web interface for the Joint Analysis of GWAS Summary Statistics.

Script to pre-process GWAS inputs

A web interface for the Joint Analysis of GWAS Summary Statistics.

A nextflow pipeline to analyze GWAS Summary Statistics with JASS. The pipeline execute:

MANOCCA test is based on covariance. This project implements MANOCCA, MANOVA and provides an simulation environment and an explainer.

scripts to prepare gwas data for using PAINTOR (https://github.com/gkichaev/PAINTOR_V3.0)

A python package to impute the SNP summary statistics from neighboring SNPs summary statistics by taking advantage of linkage desiquilibrium

Pipeline to run CMS in large-scale analyses