port to BIODOCS.yaml

gensoft/Makefile

+NAM=biodocs2mongo
+PREFIX=/local/gensoft2/adm
+BIN=$(PREFIX)/bin
+PYMODULEDIR=$(PREFIX)/share/gensoft/pymodules
+DAT=$(PREFIX)/share/gensoft/$(NAM)
+
+build:
+	sed -i -e 's,^\#!.*python,\#! /local/gensoft2/adm/bin/python,' *.py
+	sed -e 's|^DAT=.*|DAT="$(DAT)"|' \
+		-e 's|^PYMODULEDIR=.*|PYMODULEDIR="$(PYMODULEDIR)"|' $(NAM).py > $(NAM)
+
+
+install: build
+	test -d $(DAT) || mkdir -p $(DAT)
+	install -m 0775 $(NAM) $(BIN)
+	install -m 0664 config.cfg $(DAT)
+	$(MAKE) clean
+
+clean:
+	rm -f $(NAM)
+	rm -f *.pyc
+
+uninstall: 
+	rm -f $(BIN)/$(NAM) $(DAT)/*
+	rm -rf $(DAT)

gensoft/config.cfg

+[DEFAULT]
+
+ID_SEPARATOR:  @
+VERBOSE: 1
+
+[MOBYLE]
+
+MOBYLEURL: http://mobyle.pasteur.fr
+
+[MONGO]
+
+HOST:   bioweb-prod.web.pasteur.fr
+PORT:   27017
+DB:     bioweb
+COL:    catalog
+JOURNALING: True
+WRITECONCERN: 1
+
+[BIODOCS]
+
+BIODOCS_FILE: BIODOCS.yaml