Commit 98d7b275 authored by Hervé  MENAGER's avatar Hervé MENAGER

set logging level to warning and reorder docker instructions

parent 63b64840
Pipeline #10879 passed with stages
in 9 minutes and 14 seconds
......@@ -16,14 +16,15 @@ RUN git clone --depth 1 --single-branch --branch assembly --progress https://git
RUN curl -sS https://dl.yarnpkg.com/debian/pubkey.gpg | apt-key add -
RUN echo "deb https://dl.yarnpkg.com/debian/ stable main" | tee /etc/apt/sources.list.d/yarn.list
RUN apt-get update && apt-get install -y yarn
COPY job_conf.xml /app/galaxy/config/job_conf.xml
COPY dependency_resolvers_conf.xml /app/galaxy/config/dependency_resolvers_conf.xml
COPY galaxy.yml /app/galaxy/config/galaxy.yml
COPY tool_conf.xml /app/galaxy/config/tool_conf.xml
RUN cd /app/galaxy && ./scripts/common_startup.sh
RUN cd /app/galaxy && ls database/*
RUN cd /app/galaxy && ./create_db.sh
RUN cd /app/galaxy && ./manage_db.sh upgrade
COPY job_conf.xml /app/galaxy/config/job_conf.xml
COPY dependency_resolvers_conf.xml /app/galaxy/config/dependency_resolvers_conf.xml
COPY galaxy.yml /app/galaxy/config/galaxy.yml
COPY galaxy.yml /app/galaxy/config/galaxy22.yml
COPY tool_conf.xml /app/galaxy/config/tool_conf.xml
COPY welcome.html /app/galaxy/static/welcome.html
CMD ["sh", "/app/galaxy/run.sh"]
EXPOSE 8080
......@@ -897,7 +897,7 @@ galaxy:
# here: https://docs.python.org/2/library/logging.html#logging-levels
# A custom debug level of "TRACE" is available for even more
# verbosity.
#log_level: DEBUG
log_level: WARNING
# Controls where and how the server logs messages. If unset, the
# default is to log all messages to standard output at the level
......
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