draft bioblend script to upload workflows and data during build

a02d51eb · Hervé MENAGER · a7eae16a · a02d51eb
Commit a02d51eb authored Jun 14, 2019 by Hervé MENAGER
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upload_material.py upload_material.py +8 -0

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--- a/upload_material.py
+++ b/upload_material.py
+from bioblend.galaxy import GalaxyInstance
+import json
+
+BASE_URL='http://localhost:8080'
+KEY='111111111111111111111'
+gi = GalaxyInstance(url=BASE_URL, key=KEY)
+cwl_wf = json.load(open('/app/workflow-is-cwl/workflows/cmsearch-multimodel-wf.packed.cwl','r'))
+gi.workflows.import_workflow_dict(cwl_wf)