From b47d896d889ffa3ee22f1745b553bbdc917ec9c5 Mon Sep 17 00:00:00 2001
From: free hacker <freeh4cker@gmail.com>
Date: Thu, 18 Feb 2016 00:25:32 +0100
Subject: [PATCH] fix space to be pep8 compliant
---
source/_static/code/multiple_fasta_reader.py | 9 ++++-----
1 file changed, 4 insertions(+), 5 deletions(-)
diff --git a/source/_static/code/multiple_fasta_reader.py b/source/_static/code/multiple_fasta_reader.py
index 1d94a76..d6a367e 100644
--- a/source/_static/code/multiple_fasta_reader.py
+++ b/source/_static/code/multiple_fasta_reader.py
@@ -1,6 +1,6 @@
from collections import namedtuple
-Sequence = namedtuple("Sequence", "id comment sequence")
+Sequence = namedtuple("Sequence", "id comment sequence")
def fasta_reader(fasta_path):
"""
@@ -19,19 +19,18 @@ def fasta_reader(fasta_path):
# a new sequence begin
if id_ != '':
# a sequence was already parsed so add it to the list
- sequences.append(Sequence(id_ , comment, sequence))
+ sequences.append(Sequence(id_, comment, sequence))
sequence = ''
header = line.split()
id_ = header[0]
comment = ' '.join(header[1:])
else:
sequence += line.strip()
- sequences.append(Sequence(id_ , comment, sequence))
+ sequences.append(Sequence(id_, comment, sequence))
return sequences
# The problem with this implementation is that we have to load all
# sequences in memory before to start to work with
# it is better to return sequence one by one
-# and treat them as they are loaded.
-
\ No newline at end of file
+# and treat them as they are loaded.
\ No newline at end of file
--
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