diff --git a/notebooks/data/volcano.csv b/notebooks/data/volcano.csv new file mode 100755 index 0000000000000000000000000000000000000000..ae4803866dc5ab526f8ad8dbe7d7e583f41c50f7 --- /dev/null +++ b/notebooks/data/volcano.csv @@ -0,0 +1,946 @@ +,Name,log2FoldChange,padj,type,-log10padj,color +0,rpmE,-0.708,0.0006780134649931,pseudogene,3.168761681185835,-1 < log2FC < 1 +1,lldD,-0.14,0.647555711233542,coding,0.1887228619332149,Not significative +2,metH,-0.328,0.0983663292982028,non-coding,1.0071535347233982,Not significative +3,argJ,0.31,0.0330221996881161,pseudogene,1.4811940007100453,-1 < log2FC < 1 +4,cobG,0.221,0.2558328072638,non-coding,0.5920437636101661,Not significative +5,mfpA,0.411,0.163418211100742,non-coding,0.786699547926845,Not significative +6,glgB,-0.698,0.0005537652314756,pseudogene,3.256674315207104,-1 < log2FC < 1 +7,nuoK,0.027,0.931670244088211,pseudogene,0.0307377748927982,Not significative +8,nusA,-0.289,0.188723864394044,coding,0.7241731792238469,Not significative +9,lipB,-0.459,0.0022197033953915,pseudogene,2.653705053635248,-1 < log2FC < 1 +10,mutA,-0.34,0.0247248853505177,coding,1.6068657135529452,-1 < log2FC < 1 +11,gatC,-0.408,0.0390722214305495,coding,1.408131896489479,-1 < log2FC < 1 +12,parA,-0.327,0.0729959148702206,non-coding,1.136701443974944,Not significative +13,pimB,-0.161,0.392245778617226,non-coding,0.4064417216304072,Not significative +14,tlyA,-0.156,0.326255969808243,pseudogene,0.4864415328917999,Not significative +15,rpmF,-0.598,0.148488381605841,pseudogene,0.82830752615734,Not significative +16,ispG,-0.676,0.0001582157292521,pseudogene,3.80075034265998,-1 < log2FC < 1 +17,ligD,0.723,6.69730215067653e-05,non-coding,4.174100107303717,-1 < log2FC < 1 +18,mas,1.753,1.01807215474291e-21,coding,20.99222144076528,log2FC > 1 +19,irtA,0.584,0.0126450538023551,pseudogene,1.898079318473296,-1 < log2FC < 1 +20,espH,0.811,0.0045382205811723,coding,2.34311439896281,-1 < log2FC < 1 +21,glmU,0.116,0.767062611692956,non-coding,0.1151691851997157,Not significative +22,msrA,-0.375,0.0269863624764149,pseudogene,1.5688556505633289,-1 < log2FC < 1 +23,mmpL3,1.479,0.0398801419137647,pseudogene,1.3992433049176725,log2FC > 1 +24,cfp21,0.35,0.313830424835716,non-coding,0.5033049552750587,Not significative +25,ettA,0.982,1.79877404206872e-05,coding,4.745023388319828,-1 < log2FC < 1 +26,otsB,0.081,0.8517247824751,pseudogene,0.0697007159861354,Not significative +27,egtE,-0.037,0.919859879258403,pseudogene,0.0362783229799988,Not significative +28,espE,-0.08,0.722296852074075,non-coding,0.1412842778848804,Not significative +29,pgsA1,0.008,0.970194928596322,pseudogene,0.0131409998484723,Not significative +30,fcoT,-0.47,0.13290464265863,non-coding,0.8764598479074761,Not significative +31,mbtH,-0.156,0.595462121330263,pseudogene,0.2251458597403369,Not significative +32,crp,0.51,0.046894950385006,coding,1.3288739192890704,-1 < log2FC < 1 +33,pknD,0.064,0.806148721055084,pseudogene,0.0935848306819752,Not significative +34,mazE5,-0.299,0.026840181097884,pseudogene,1.571214558192078,-1 < log2FC < 1 +35,gltB,1.454,1.1433581689212e-12,coding,11.941817700996175,log2FC > 1 +36,ftsQ,-0.076,0.859098538787222,pseudogene,0.0659570196412131,Not significative +37,frdA,-0.825,2.2697295874009e-13,pseudogene,12.64402588099855,-1 < log2FC < 1 +38,mosR,-0.237,0.193266437457824,non-coding,0.7138435587620564,Not significative +39,leuC,0.008,0.972247509319419,coding,0.0122231607443679,Not significative +40,rubB,-0.318,0.0267862642148227,coding,1.5720878516780978,-1 < log2FC < 1 +41,hisI,-0.22,0.183116937197461,coding,0.7372714842553454,Not significative +42,cydB,-0.949,0.0004995599192929,pseudogene,3.301412413228644,-1 < log2FC < 1 +43,sufD,-0.416,0.0043344450635032,coding,2.3630664971002573,-1 < log2FC < 1 +44,ftsW,-0.485,0.0335316427341836,pseudogene,1.4745451697171623,-1 < log2FC < 1 +45,csm4,-0.773,0.0037177617235474,pseudogene,2.4297184482017258,-1 < log2FC < 1 +46,lysX,-0.001,0.999004914358901,non-coding,0.0004323753639043,Not significative +47,pstS,0.406,0.0955530238423133,pseudogene,1.019755564838676,Not significative +48,sppA,0.738,0.206359144029359,pseudogene,0.685376282233586,Not significative +49,groL,0.114,0.713674504730215,coding,0.1464998176787667,Not significative +50,rsdA,-0.233,0.413933677497944,non-coding,0.3830692381159732,Not significative +51,cysC,-0.916,1.19928873328605e-06,pseudogene,5.921076246278158,-1 < log2FC < 1 +52,ponA1,-0.782,0.0003762952664792,non-coding,3.4244712447545265,-1 < log2FC < 1 +53,htpG,-0.508,0.0907257225952516,pseudogene,1.042269564126241,Not significative +54,ptbB,-0.498,0.0011634142959522,pseudogene,2.934265603925129,-1 < log2FC < 1 +55,ald,-0.62,0.0003349122270415,coding,3.475068996862281,-1 < log2FC < 1 +56,gmhB,-0.947,2.13271745434087e-05,pseudogene,4.671066676734612,-1 < log2FC < 1 +57,uvrC,-0.729,0.0001101319881887,coding,3.9580865204822673,-1 < log2FC < 1 +58,ddn,0.27,0.382547891455018,coding,0.4173141874576329,Not significative +59,thiO,-0.439,0.0788086490336083,coding,1.1034261172636872,Not significative +60,mftE,0.236,0.281673702577252,pseudogene,0.5502536974185671,Not significative +61,trxA,-0.18,0.426555498458889,non-coding,0.3700244554544857,Not significative +62,clpC1,-0.458,0.269580795745846,pseudogene,0.5693110490754125,Not significative +63,higB,0.022,0.922753516068195,coding,0.0349142912896004,Not significative +64,gcvT,0.119,0.483098130666438,coding,0.3159646429995525,Not significative +65,espL,0.201,0.489568031081272,coding,0.3101869494783,Not significative +66,argH,-0.715,0.231703663887779,coding,0.6350670987362914,Not significative +67,kdpA,-1.183,0.0823147702111399,coding,1.0845222298466115,Not significative +68,esxQ,-0.983,0.0793214332105036,coding,1.1006094473942452,Not significative +69,senX3,-1.145,0.0064274639548186,pseudogene,2.191960350199264,log2FC < -1 +70,sugA,-0.118,0.661184650612344,pseudogene,0.17967723712076,Not significative +71,map,-0.602,5.97904490177794e-05,pseudogene,4.223368185077732,-1 < log2FC < 1 +72,sigM,0.028,0.958020780412854,pseudogene,0.0186250705448847,Not significative +73,yidD,0.214,0.633193190737074,coding,0.1984637641211398,Not significative +74,pdxH,0.146,0.596691249996446,coding,0.2242503306930606,Not significative +75,narH,-0.061,0.792878471523932,pseudogene,0.1007933740836655,Not significative +76,esxV,-0.105,0.641135240968219,non-coding,0.1930503508071172,Not significative +77,mpt63,-0.083,0.715701496559237,coding,0.1452680746587153,Not significative +78,whiB6,0.948,1.71625085439298e-09,non-coding,8.765419233552384,-1 < log2FC < 1 +79,pgm,1.72,1.00513848683361e-07,pseudogene,6.997774097522923,log2FC > 1 +80,secY,0.303,0.201651305834223,pseudogene,0.695398961284624,Not significative +81,trpC,-0.283,0.806148721055084,non-coding,0.0935848306819752,Not significative +82,fabI,0.75,0.0651933521811043,coding,1.185796687370206,Not significative +83,rplW,-0.079,0.796617325618696,coding,0.0987502523595675,Not significative +84,rpfB,0.032,0.915549038068369,non-coding,0.0383183893282723,Not significative +85,rip,1.485,3.6278744051909405e-14,non-coding,13.440347756362955,log2FC > 1 +86,iniC,-0.25,0.175453976423141,non-coding,0.7558367846497243,Not significative +87,coaD,-0.778,2.58888441456885e-05,pseudogene,4.586887338995608,-1 < log2FC < 1 +88,lipX,0.428,0.0293313436039871,coding,1.532668042493966,-1 < log2FC < 1 +89,adnA,-0.245,0.428619500713039,non-coding,0.3679280739395314,Not significative +90,lpqI,0.333,0.0642510053183559,coding,1.192120072653496,Not significative +91,yidC,-0.401,0.0421905195272216,non-coding,1.3747851267533084,-1 < log2FC < 1 +92,mesT,0.207,0.386719443825181,coding,0.4126039915325889,Not significative +93,rpsH,-0.212,0.404608912966284,pseudogene,0.3929645545621506,Not significative +94,esxJ,0.36,0.0896713283131124,non-coding,1.047346396932456,Not significative +95,rplE,-0.153,0.540345382881226,pseudogene,0.2673285551201092,Not significative +96,hemC,-0.083,0.693701411773035,coding,0.1588274216535384,Not significative +97,mprA,0.06,0.767062611692956,non-coding,0.1151691851997157,Not significative +98,fadD29,-0.536,8.23690291465606e-05,coding,4.084236052855411,-1 < log2FC < 1 +99,dmpG,-0.112,0.452541024499551,coding,0.344342044290428,Not significative +100,rpmJ,0.064,0.71770931270415,pseudogene,0.1440514185025534,Not significative +101,bioD,-0.512,0.0071266184383323,non-coding,2.1471164928605178,-1 < log2FC < 1 +102,fabG,0.262,0.0399402382826727,pseudogene,1.3985893484652865,-1 < log2FC < 1 +103,esxN,-0.255,0.249038787750024,coding,0.6037330063423924,Not significative +104,polA,-0.441,0.127058447156638,pseudogene,0.8959964566933778,Not significative +105,serA,-0.916,6.72778630482275e-08,pseudogene,7.17212781151903,-1 < log2FC < 1 +106,mymT,-0.576,0.0696599768652179,coding,1.1570166741113437,Not significative +107,rbsK,-0.161,0.605618922301149,pseudogene,0.2178005639528466,Not significative +108,nuoL,-0.778,8.39830910423519e-06,pseudogene,5.075808144964427,-1 < log2FC < 1 +109,lpqW,0.046,0.832648914167579,non-coding,0.0795380799624685,Not significative +110,ccsB,0.312,0.475970535971645,non-coding,0.3224199306008908,Not significative +111,espB,0.594,0.401151242090348,coding,0.3966918587471672,Not significative +112,clpB,0.135,0.566504509118424,coding,0.2467966290001316,Not significative +113,spmT,-0.335,0.473315208802098,non-coding,0.3248495403393011,Not significative +114,pstP,1.077,3.862900154795e-05,pseudogene,4.413086517012303,log2FC > 1 +115,sucD,1.191,2.24169283094703e-05,non-coding,4.649423897077363,log2FC > 1 +116,malQ,1.45,0.0165467760420025,pseudogene,1.7812866111668733,log2FC > 1 +117,moaC,0.201,0.592421260105467,coding,0.227369364430348,Not significative +118,maf,1.328,1.21579742547741e-06,non-coding,5.915138780594725,log2FC > 1 +119,sdhC,1.25,2.35655128481971e-09,pseudogene,8.627723104399212,log2FC > 1 +120,dop,-0.149,0.658599114519998,coding,0.1813788575283582,Not significative +121,glfT2,0.445,0.193266437457824,pseudogene,0.7138435587620564,Not significative +122,dosT,1.065,1.02224472998804e-06,coding,5.990445119700516,log2FC > 1 +123,nat,-0.076,0.858844666326004,coding,0.0660853770973718,Not significative +124,folE,0.399,0.171824663923545,coding,0.7649144968662624,Not significative +125,bpa,0.549,0.0276150198686586,non-coding,1.558854639970788,-1 < log2FC < 1 +126,kdpF,0.359,0.0390716992307998,coding,1.4081377008685738,-1 < log2FC < 1 +127,gatA,0.764,1.01413186792311e-05,pseudogene,4.993905569866787,-1 < log2FC < 1 +128,efpA,0.487,0.0008557947348246,non-coding,3.0676303897890533,-1 < log2FC < 1 +129,uvrB,0.345,0.0487771005614723,pseudogene,1.311784018855782,-1 < log2FC < 1 +130,espD,0.348,0.049910798340803,coding,1.3018054833850798,-1 < log2FC < 1 +131,eccD1,0.027,0.886267545556976,pseudogene,0.0524351539379042,Not significative +132,hadA,0.01,0.966544621460953,pseudogene,0.0147780915506503,Not significative +133,ppsC,0.547,0.002229384902471,pseudogene,2.6518149442661723,-1 < log2FC < 1 +134,pepN,0.14,0.5102868026393,non-coding,0.2921856635216651,Not significative +135,rpe,-0.472,0.0696599768652179,pseudogene,1.1570166741113437,Not significative +136,tal,0.032,0.869431963440941,non-coding,0.060764397627063,Not significative +137,xth,0.138,0.299031053283849,non-coding,0.5242837094362848,Not significative +138,lipG,0.499,0.335924299219561,coding,0.4737585801557089,Not significative +139,dnaE,0.969,0.0664181165243202,coding,1.1777134442253263,Not significative +140,katG,0.915,7.07838693425823e-10,coding,9.150065700695375,-1 < log2FC < 1 +141,devS,0.393,0.0040390885068859,non-coding,2.39371663020931,-1 < log2FC < 1 +142,fusA,0.301,0.0421306349951035,pseudogene,1.3754019951149934,-1 < log2FC < 1 +143,ppk2,-0.208,0.227083953666585,non-coding,0.6438135530557776,Not significative +144,prfB,0.101,0.586865206677273,pseudogene,0.2314616376256088,Not significative +145,hemB,0.247,0.206359144029359,coding,0.685376282233586,Not significative +146,carD,0.102,0.707265103871389,non-coding,0.1504177692750596,Not significative +147,papA1,-0.112,0.735484880326033,pseudogene,0.1334262508201568,Not significative +148,gpgP,-0.395,0.0768119820806407,pseudogene,1.114571028072522,Not significative +149,rplJ,-0.624,0.040218301758247,non-coding,1.3955762716953564,-1 < log2FC < 1 +150,rodA,0.445,0.001927188771983,coding,2.715075743250493,-1 < log2FC < 1 +151,lipC,0.715,2.79057590338619e-05,pseudogene,4.554306160220081,-1 < log2FC < 1 +152,nth,0.481,0.0167939054088351,non-coding,1.774848297293855,-1 < log2FC < 1 +153,rplF,0.434,0.0119420160314928,non-coding,1.9229223501376431,-1 < log2FC < 1 +154,rpsK,0.061,0.84139545227019,pseudogene,0.0749998396678449,Not significative +155,glmS,0.595,0.0187418305406059,pseudogene,1.7271879932316605,-1 < log2FC < 1 +156,lprA,0.001,0.997545038521872,pseudogene,0.0010674870798556,Not significative +157,mctB,-0.038,0.913588295480694,pseudogene,0.0392494730657291,Not significative +158,pgl,-0.019,0.962681793155263,non-coding,0.0165172417580899,Not significative +159,rplP,0.755,0.0015861543931637,pseudogene,2.79965454158615,-1 < log2FC < 1 +160,mftC,0.196,0.313024654530223,non-coding,0.5044214550901265,Not significative +161,proX,0.222,0.346885577634884,non-coding,0.4598137563233858,Not significative +162,fadE28,0.136,0.540345382881226,non-coding,0.2673285551201092,Not significative +163,pepD,0.269,0.264311054439333,coding,0.5778846727305432,Not significative +164,eccB3,0.187,0.477236466596167,coding,0.3212663784208156,Not significative +165,rph,0.615,0.0487377576732506,coding,1.3121344557121384,-1 < log2FC < 1 +166,zmp1,0.185,0.547213179216748,coding,0.2618434515069024,Not significative +167,upp,0.053,0.925212982597093,non-coding,0.0337582818344922,Not significative +168,rlmB,-0.003,0.994500974293432,pseudogene,0.0023947870694058,Not significative +169,trxB,-0.105,0.472306594637161,coding,0.3257759904924626,Not significative +170,suhB,0.381,0.518285497002424,coding,0.2854309436974991,Not significative +171,mmpL11,0.413,0.0116964311689505,coding,1.9319466305670865,-1 < log2FC < 1 +172,leuD,0.523,0.0016065002982792,pseudogene,2.794119189476921,-1 < log2FC < 1 +173,atsA,1.04,2.39371171752862e-08,non-coding,7.62092815427436,log2FC > 1 +174,meaB,0.853,0.0021565913758361,non-coding,2.666232135857621,-1 < log2FC < 1 +175,clpP1,0.118,0.645158337797996,pseudogene,0.1903336856857982,Not significative +176,era,0.299,0.135808556437007,pseudogene,0.8670728670487925,Not significative +177,sigE,0.604,0.0131716763499082,coding,1.8803589491699544,-1 < log2FC < 1 +178,mbtB,-0.297,0.297516083420411,coding,0.5264895517776776,Not significative +179,rho,0.01,0.972247509319419,pseudogene,0.0122231607443679,Not significative +180,rplQ,-0.253,0.245086578320778,non-coding,0.6106804713706345,Not significative +181,esxG,-0.286,0.28649573973867,coding,0.5428818317131481,Not significative +182,smc,0.469,0.0319012753119016,coding,1.496191954878536,-1 < log2FC < 1 +183,ift,0.059,0.748308564902642,pseudogene,0.1259192839515366,Not significative +184,espJ,0.225,0.264977033133856,pseudogene,0.5767917668763429,Not significative +185,gmd,-0.155,0.658599114519998,pseudogene,0.1813788575283582,Not significative +186,espF,-0.369,0.0349425944348876,pseudogene,1.4566448524462587,-1 < log2FC < 1 +187,glgE,0.148,0.451208939495012,pseudogene,0.3456223045590779,Not significative +188,eccD2,-1.309,4.56528529277711e-11,non-coding,10.340532077448993,log2FC < -1 +189,ponA2,-1.516,1.61475628896869e-08,non-coding,7.791893015340887,log2FC < -1 +190,cysK2,-0.568,0.100039000172689,coding,0.9998306574218818,Not significative +191,rplB,-0.243,0.193266437457824,pseudogene,0.7138435587620564,Not significative +192,nucS,0.493,0.0512152946484091,pseudogene,1.2906003243857669,Not significative +193,lrpA,0.042,0.949592687763737,coding,0.0224626382784929,Not significative +194,tatA,-0.05,0.906307022763849,non-coding,0.042724654746359,Not significative +195,rpsS,0.087,0.737556355505115,coding,0.132204790333082,Not significative +196,rpsO,-0.475,0.0406019983448966,pseudogene,1.3914525908365052,-1 < log2FC < 1 +197,rapZ,-0.323,0.0505412591004511,pseudogene,1.2963539429945226,Not significative +198,esxJ,0.107,0.60887580021089,pseudogene,0.2154712866512218,Not significative +199,mmpL5,0.384,0.151658294751492,coding,0.8191338315367227,Not significative +200,nuoE,-0.396,0.0130677422733865,non-coding,1.883799439420799,-1 < log2FC < 1 +201,esxL,-0.635,0.119005970219338,pseudogene,0.9244312506387692,Not significative +202,lpqB,-0.067,0.804380570874794,non-coding,0.094538427960639,Not significative +203,crcB,0.212,0.164155936049148,non-coding,0.7847434081111427,Not significative +204,cobA,-0.402,0.0213947666099456,pseudogene,1.6696924467619887,-1 < log2FC < 1 +205,desA1,-0.24,0.265858605165199,non-coding,0.5753492781172289,Not significative +206,ctpC,-0.781,0.0001031222538129,non-coding,3.986647603724773,-1 < log2FC < 1 +207,ldtMt3,-0.352,0.17899587971275,non-coding,0.7471569658838587,Not significative +208,espC,-0.3,0.0767562881327594,coding,1.114886035531642,Not significative +209,rpsF,-0.173,0.388954800616681,non-coding,0.4101008639269455,Not significative +210,mazF4,-0.523,0.0006409390951423,coding,3.1931832370963287,-1 < log2FC < 1 +211,rplM,-0.757,0.0006484734695802,non-coding,3.188107787121325,-1 < log2FC < 1 +212,pta,-0.729,0.0033639175859023,pseudogene,2.473154652715475,-1 < log2FC < 1 +213,drrB,0.113,0.648547501882677,non-coding,0.1880582091712524,Not significative +214,ligA,1.023,1.59428071836802e-08,pseudogene,7.797435206337446,log2FC > 1 +215,folC,-0.363,0.0220298240922576,coding,1.656988970668881,-1 < log2FC < 1 +216,tsaB,-0.548,0.0046483247052267,non-coding,2.332703542243641,-1 < log2FC < 1 +217,alaS,-0.098,0.664182569926305,pseudogene,0.1777125257327413,Not significative +218,glgX,1.332,7.50905343815597e-10,coding,9.124414805005756,log2FC > 1 +219,arsB,0.024,0.940619806223724,pseudogene,0.0265858807429176,Not significative +220,mftA,-0.248,0.335153911398704,pseudogene,0.47475570782639,Not significative +221,lcp1,-0.314,0.0905734215539881,pseudogene,1.04299922578767,Not significative +222,tilS,-0.201,0.504712748226211,coding,0.2969557255528692,Not significative +223,recA,0.492,0.196736513309822,coding,0.7061150297230538,Not significative +224,secE2,0.908,0.0003624807800937,pseudogene,3.440715016184132,-1 < log2FC < 1 +225,ppsD,0.152,0.529436536504443,coding,0.2761860912652296,Not significative +226,eccC4,0.468,0.396294857779161,pseudogene,0.401981562923504,Not significative +227,mpt83,-0.014,0.938367117708423,coding,0.0276272191874887,Not significative +228,rraA,-0.007,0.980873344814631,coding,0.0083870672370312,Not significative +229,ahpC,0.016,0.93805749626191,non-coding,0.0277705416379817,Not significative +230,nirB,-0.036,0.8360727646763,pseudogene,0.0777559236109832,Not significative +231,map,-0.383,0.005869268600184,coding,2.231416015054752,-1 < log2FC < 1 +232,whiA,-0.409,0.142854235563994,non-coding,0.8451068784537957,Not significative +233,recN,0.271,0.567661729514821,pseudogene,0.2459103839510611,Not significative +234,ldtMt5,0.495,0.0431788729148377,coding,1.3647286981123723,-1 < log2FC < 1 +235,esxA,0.0,1.0,pseudogene,-0.0,Not significative +236,dnaA,0.638,0.0187418305406059,non-coding,1.7271879932316605,-1 < log2FC < 1 +237,vapB26,-0.136,0.707697678352511,pseudogene,0.1501522291232249,Not significative +238,nirD,-0.354,0.150783830111499,pseudogene,0.8216452292214016,Not significative +239,vapC21,-0.403,0.449313997606972,coding,0.3474500514965025,Not significative +240,espG1,0.395,0.0928433568289754,pseudogene,1.0322491656531572,Not significative +241,csoR,-0.498,0.121952206044145,pseudogene,0.913810339145794,Not significative +242,atpA,0.588,0.0004477549865237,pseudogene,3.3489595688342235,-1 < log2FC < 1 +243,embR,-0.015,0.953865162842519,pseudogene,0.0205130122688288,Not significative +244,glgA,-0.364,0.0388047423941766,coding,1.4111151952881789,-1 < log2FC < 1 +245,ilvN,0.501,0.0429479492371801,pseudogene,1.3670575688813984,-1 < log2FC < 1 +246,hemE,0.859,0.0002136657470454,coding,3.6702650944081823,-1 < log2FC < 1 +247,far,0.62,0.0752432906863105,coding,1.123532219293174,Not significative +248,eccE1,0.931,1.58293984716322e-05,non-coding,4.800535588322385,-1 < log2FC < 1 +249,lysA,-0.025,0.897087679132127,pseudogene,0.0471651080123763,Not significative +250,nuoH,-0.031,0.874902154699836,pseudogene,0.0580405138919814,Not significative +251,dnaN,-0.007,0.984373510118013,non-coding,0.0068400818489241,Not significative +252,gatB,-0.233,0.649229606498524,non-coding,0.187601683476496,Not significative +253,vapB20,-0.881,6.92021135233616e-08,coding,7.159880641417283,-1 < log2FC < 1 +254,recF,-0.475,0.0377053394745779,coding,1.4235971447505198,-1 < log2FC < 1 +255,cydD,-0.747,2.28437953879157e-07,coding,6.641231738469493,-1 < log2FC < 1 +256,kdpD,-1.048,7.53175243069967e-10,coding,9.12310396371486,log2FC < -1 +257,whiB2,-0.795,6.76307813055584e-08,coding,7.169855595352527,-1 < log2FC < 1 +258,mftB,1.138,0.0004239720817191,pseudogene,3.372662740469848,log2FC > 1 +259,mazE3,0.737,0.116601384725306,pseudogene,0.9332962919870524,Not significative +260,relF,1.064,2.3972453315394597e-11,pseudogene,10.620287518456236,log2FC > 1 +261,rplA,0.281,0.117691592039941,coding,0.9292545623144954,Not significative +262,secA2,-0.387,0.0791821615213612,pseudogene,1.1013726470143936,Not significative +263,dacB,0.262,0.403149804540898,non-coding,0.3945335464235517,Not significative +264,iunH,-0.808,3.55050098172513e-05,non-coding,4.449710362931375,-1 < log2FC < 1 +265,cyp141,-1.439,0.0001027654945825,pseudogene,3.9881526832781566,log2FC < -1 +266,pstS,0.207,0.201651305834223,pseudogene,0.695398961284624,Not significative +267,lnt,-0.127,0.571669947936142,pseudogene,0.2428546375715372,Not significative +268,espR,-0.329,0.277053532954832,pseudogene,0.5574363073954132,Not significative +269,guaA,0.333,0.0721171789909882,non-coding,1.1419612699225834,Not significative +270,rpsG,-0.349,0.19194610385044,coding,0.716820698828824,Not significative +271,ripB,0.241,0.440388035207859,non-coding,0.3561644887779221,Not significative +272,pruA,-0.275,0.167067643866422,non-coding,0.77710765214683,Not significative +273,ureG,-0.161,0.387822310101138,pseudogene,0.4113672110512342,Not significative +274,erm(37),-0.413,0.176722252162703,coding,0.7527087624172817,Not significative +275,devR,0.14,0.495479800088834,coding,0.3049740463023718,Not significative +276,alkA,0.054,0.86767684780566,non-coding,0.0616419906597431,Not significative +277,otsB,-0.107,0.73008039313887,non-coding,0.1366293147093775,Not significative +278,rfbD,0.199,0.358128274853229,pseudogene,0.4459613893260675,Not significative +279,sigD,0.101,0.742986498456552,coding,0.1290190781628343,Not significative +280,prrB,-0.078,0.896168062947348,coding,0.0476105372505571,Not significative +281,trpS,0.596,0.0164445753846089,pseudogene,1.7839773359546354,-1 < log2FC < 1 +282,miaA,0.069,0.783884932058584,non-coding,0.1057476835396228,Not significative +283,oxc,-0.239,0.299031053283849,pseudogene,0.5242837094362848,Not significative +284,eccCa1,-0.062,0.748488922339807,coding,0.1258146228457054,Not significative +285,higA,0.462,0.0805581395240604,pseudogene,1.0938905722926269,Not significative +286,ldtMt2,-0.284,0.197063930618643,non-coding,0.705392859062973,Not significative +287,rplK,-0.738,4.81062881896472e-06,non-coding,5.317798151327388,-1 < log2FC < 1 +288,hrcA,1.464,5.04266708642547e-07,coding,6.297339702731385,log2FC > 1 +289,bfrA,-0.483,0.196762308872654,non-coding,0.7060580899307087,Not significative +290,tesA,-0.6,0.129564915135486,non-coding,0.887512585085064,Not significative +291,mmpL12,-0.244,0.131171134993126,non-coding,0.8821617235915042,Not significative +292,ldtMt1,-0.18,0.470827279295057,pseudogene,0.327138382480902,Not significative +293,treS,-0.2,0.393352488042068,coding,0.4052180984768674,Not significative +294,mbtN,0.147,0.458679832450544,coding,0.3384903548058694,Not significative +295,hbhA,-0.443,0.0018772186564782,pseudogene,2.7264851382624027,-1 < log2FC < 1 +296,raiA,-0.042,0.826746359120261,non-coding,0.0826277089845185,Not significative +297,csm2,-0.179,0.465667545451684,coding,0.331924029025401,Not significative +298,chsH1,-0.436,0.112798377519674,non-coding,0.947697147155161,Not significative +299,modA,-0.277,0.0761574037601766,coding,1.1182878696636007,Not significative +300,eccA3,1.011,0.336531392830021,coding,0.4729744170360566,Not significative +301,eccB4,1.917,8.654188209449989e-16,non-coding,15.062773664090292,log2FC > 1 +302,glpK,2.122,2.13916254302914e-28,non-coding,27.66975621455955,log2FC > 1 +303,topA,-0.066,0.815141118295763,coding,0.0887671991228388,Not significative +304,der,-0.559,0.0031319929290124,pseudogene,2.504179227103993,-1 < log2FC < 1 +305,phoU,-0.325,0.0096193932783848,non-coding,2.016852319246913,-1 < log2FC < 1 +306,darT,0.006,0.980121192664251,non-coding,0.0087202201737042,Not significative +307,dnaJ,-0.128,0.548553923320675,pseudogene,0.2607806744711423,Not significative +308,egtD,-0.316,0.241922298455442,coding,0.6163241000141493,Not significative +309,lpqY,-0.466,0.0578215237973344,coding,1.237910467351391,Not significative +310,thiG,-0.318,0.0351199266478129,non-coding,1.4544463998412016,-1 < log2FC < 1 +311,fbaA,-0.385,0.0289030770233998,coding,1.5390559197642972,-1 < log2FC < 1 +312,cyp142,-0.074,0.725628310683859,pseudogene,0.139285781441449,Not significative +313,fadD23,-0.489,0.0004318479787454,non-coding,3.364669108766882,-1 < log2FC < 1 +314,adnB,-0.44,0.0276978828754533,coding,1.5575534255437515,-1 < log2FC < 1 +315,canA,0.385,0.23430316041939,pseudogene,0.6302218533430942,Not significative +316,mbtA,-0.294,0.239371909687714,non-coding,0.6209268154308487,Not significative +317,lucA,-0.022,0.954110530519369,pseudogene,0.0204013108157636,Not significative +318,bkdB,0.909,0.0073480016319701,coding,2.133830755910659,-1 < log2FC < 1 +319,rpmG,-0.764,0.0007716148343597,coding,3.1125994316001706,-1 < log2FC < 1 +320,whiB7,-0.806,6.19093996934209e-07,pseudogene,6.208243407117748,-1 < log2FC < 1 +321,mmpS5,0.617,0.0036668507802427,non-coding,2.4357067629697955,-1 < log2FC < 1 +322,tcrY,0.527,0.0235692012697309,pseudogene,1.6276551349142026,-1 < log2FC < 1 +323,lipU,-0.128,0.486112414691105,pseudogene,0.3132632874566383,Not significative +324,cmtR,0.326,0.47804375327218,non-coding,0.3205323524776927,Not significative +325,ldtMt4,0.6,0.0007986405190141,pseudogene,3.097648659659047,-1 < log2FC < 1 +326,htdZ,0.637,0.0001625838034359,coding,3.7889227209115046,-1 < log2FC < 1 +327,papA2,-0.46,0.0492363646268618,pseudogene,1.3077140207443447,-1 < log2FC < 1 +328,glbN,-0.207,0.452469558921468,non-coding,0.3444106337784198,Not significative +329,papA3,0.24,0.175825565891811,pseudogene,0.7549179761423658,Not significative +330,cysD,-0.131,0.618198681736374,non-coding,0.2088719253730517,Not significative +331,dut,-0.204,0.287417408289527,pseudogene,0.5414869310691571,Not significative +332,moeB,0.111,0.649821625813587,pseudogene,0.1872058395973376,Not significative +333,nuoI,0.285,0.298370102107604,coding,0.5252446970848098,Not significative +334,cei,-0.573,0.008593932532633,coding,2.06580806010292,-1 < log2FC < 1 +335,pstA,-0.11,0.795501113827295,non-coding,0.0993592079360553,Not significative +336,abmR,-0.369,0.107640757655949,coding,0.968023254008991,Not significative +337,ruvX,-0.144,0.546959680210693,pseudogene,0.2620446870256211,Not significative +338,pdhA,-0.088,0.70487682047545,pseudogene,0.151886770755892,Not significative +339,nmtR,-0.5,0.0007151309862692,pseudogene,3.1456144037879965,-1 < log2FC < 1 +340,mmaA1,0.748,0.01693556483851,non-coding,1.7712003140971624,-1 < log2FC < 1 +341,wag31,0.044,0.887164446582971,coding,0.0519958710092785,Not significative +342,blaI,0.009,0.979009193048739,coding,0.0092132300849172,Not significative +343,prcA,-0.04,0.890557839703941,pseudogene,0.0503378688469894,Not significative +344,embC,-0.503,0.171571865994683,coding,0.7655539253741781,Not significative +345,cuvA,0.844,0.0242805746544055,non-coding,1.6147410389195156,-1 < log2FC < 1 +346,kstR,-0.581,0.0019772030259355,non-coding,2.703948733561208,-1 < log2FC < 1 +347,phoR,-1.401,6.799134591517211e-09,coding,8.16754636171239,log2FC < -1 +348,rplX,-1.359,3.77844113056917e-05,non-coding,4.422687339853016,log2FC < -1 +349,moaR1,-0.838,1.2488024340840202e-09,pseudogene,8.903506263446417,-1 < log2FC < 1 +350,proW,-0.692,5.16631768826761e-05,non-coding,4.286818891616156,-1 < log2FC < 1 +351,nrdF,-0.312,0.196321599786857,non-coding,0.7070319156206701,Not significative +352,vapB30,-0.33,0.0319180102132395,coding,1.4959641906404058,-1 < log2FC < 1 +353,esxW,-0.461,0.106076545472595,pseudogene,0.9743806321012428,Not significative +354,hupB,0.366,0.211428944560308,coding,0.6748355581717463,Not significative +355,kdpE,-0.058,0.874007087913494,non-coding,0.0584850453641817,Not significative +356,cysT,-0.408,0.0164445753846089,pseudogene,1.7839773359546354,-1 < log2FC < 1 +357,esxB,-0.116,0.579415561538794,pseudogene,0.2370098449975096,Not significative +358,arfA,0.014,0.982728532669281,pseudogene,0.0075664344018971,Not significative +359,fdhD,1.579,2.26898130886044e-19,coding,18.64416908167884,log2FC > 1 +360,cysK,-0.448,0.0566199133303842,pseudogene,1.2470307997565868,Not significative +361,acn,0.242,0.647975326192787,coding,0.1884415310157267,Not significative +362,secD,0.586,0.459590103700816,coding,0.3376293314946308,Not significative +363,sigK,-0.231,0.222190548800576,coding,0.6532744183521882,Not significative +364,ilvC,0.161,0.476889276553962,coding,0.3215824431056623,Not significative +365,grcC,0.145,0.541340218325613,pseudogene,0.2665297062397396,Not significative +366,cysM,0.161,0.435654388287915,non-coding,0.3608579070181125,Not significative +367,cas10,-0.191,0.285043491305131,non-coding,0.5450888712447927,Not significative +368,mpt64,-0.91,0.0036823209348059,non-coding,2.433878362996264,-1 < log2FC < 1 +369,aspS,-0.441,0.265858605165199,pseudogene,0.5753492781172289,Not significative +370,groES,-0.22,0.349462265008619,coding,0.4565997125743637,Not significative +371,secG,-0.113,0.729473730501589,pseudogene,0.1369903431175102,Not significative +372,mqo,0.347,0.122725606380007,pseudogene,0.9110648133992856,Not significative +373,cofC,-0.347,0.150783830111499,non-coding,0.8216452292214016,Not significative +374,folB,-0.388,0.208690878569688,coding,0.6804965325992425,Not significative +375,eccB5,-0.567,0.0001035039451117,non-coding,3.985043096510552,-1 < log2FC < 1 +376,htrA,-0.802,4.18926809160796e-05,non-coding,4.377861846136652,-1 < log2FC < 1 +377,sigH,-0.467,0.0305339243011117,coding,1.5152173754329883,-1 < log2FC < 1 +378,cysW,-0.089,0.675718216410974,coding,0.1702343729499301,Not significative +379,lipV,-0.86,0.0001327553197527,non-coding,3.876948066909753,-1 < log2FC < 1 +380,pafA,-1.013,0.0001073739087196,non-coding,3.969101237032313,log2FC < -1 +381,fabH,-0.04,0.791139261362738,pseudogene,0.1017470624972776,Not significative +382,cyp51,-0.222,0.256981426238797,coding,0.5900982648924442,Not significative +383,kdpB,0.053,0.889713288935485,coding,0.0507499226741194,Not significative +384,ag85B,-0.221,0.355927437750229,pseudogene,0.4486385317932446,Not significative +385,lipF,-0.589,0.0185931153893748,pseudogene,1.7306478354536667,-1 < log2FC < 1 +386,obgE,0.045,0.805593744012168,non-coding,0.0938839150357985,Not significative +387,kshB,1.346,1.3415133654406401e-15,pseudogene,14.872404996113024,log2FC > 1 +388,vapC4,-0.094,0.543548366518265,coding,0.2647618050691186,Not significative +389,lpqs,1.15,3.06395939721775e-12,non-coding,11.513716994157292,log2FC > 1 +390,groL,1.96,1.61980407257872e-29,non-coding,28.790537513447404,log2FC > 1 +391,fxsA,0.602,7.68625756973141e-05,pseudogene,4.114285066236648,-1 < log2FC < 1 +392,esxU,0.279,0.312614078186511,non-coding,0.5049914679641611,Not significative +393,hflX,0.115,0.696313475214818,non-coding,0.1571952001787055,Not significative +394,whiB4,0.215,0.148488381605841,non-coding,0.82830752615734,Not significative +395,citE,-0.15,0.586865206677273,non-coding,0.2314616376256088,Not significative +396,panB,-0.246,0.46117583337218,pseudogene,0.3361334587669646,Not significative +397,lexA,-0.111,0.703766192208981,non-coding,0.1525715998050924,Not significative +398,nuoD,-0.136,0.713674504730215,non-coding,0.1464998176787667,Not significative +399,glf,0.291,0.439756891710049,non-coding,0.3567873457120197,Not significative +400,ppsB,-0.398,0.211428944560308,pseudogene,0.6748355581717463,Not significative +401,rbpA,-0.757,2.0487972792818e-06,non-coding,5.6885010112643855,-1 < log2FC < 1 +402,atsB,-0.817,7.6070991444316e-05,non-coding,4.11878092348483,-1 < log2FC < 1 +403,carB,-1.141,1.9893095954912597e-11,coding,10.701297622531524,log2FC < -1 +404,hisH,-0.687,0.0024932105929168,non-coding,2.6032410365868976,-1 < log2FC < 1 +405,mce2R,0.116,0.630439335191527,non-coding,0.2003566976065729,Not significative +406,prmC,-0.531,0.0152777955663064,pseudogene,1.8159393056068769,-1 < log2FC < 1 +407,rpsQ,-1.059,0.0696744715287019,coding,1.156926316666169,Not significative +408,esxH,-0.281,0.0195400666908127,coding,1.70907395835509,-1 < log2FC < 1 +409,pemK,0.583,0.234988042551783,coding,0.6289542363916731,Not significative +410,ssrA,-0.364,0.0425450838010951,non-coding,1.37115061657607,-1 < log2FC < 1 +411,cyp124,-0.375,0.0647026515342252,coding,1.189077921447422,Not significative +412,relE,0.132,0.737355401027558,pseudogene,0.132323134255517,Not significative +413,bfrB,0.698,0.0684149688159751,pseudogene,1.1648488666578207,Not significative +414,rpfE,0.252,0.208658456751112,non-coding,0.6805640090068343,Not significative +415,mca,0.216,0.270789885168586,non-coding,0.5673675619127059,Not significative +416,amrS,-0.24,0.163802205580034,coding,0.7856802548052138,Not significative +417,clpX,-0.14,0.400242084322898,pseudogene,0.3976772484627042,Not significative +418,mprB,-0.415,0.0042354632036556,non-coding,2.3730990869174287,-1 < log2FC < 1 +419,rsbW,-0.78,0.0006665395497342,coding,3.176174076225021,-1 < log2FC < 1 +420,rrf,-0.769,0.0001132655806443,pseudogene,3.945902044304784,-1 < log2FC < 1 +421,ruvA,-0.212,0.423150474997871,pseudogene,0.3735051672813582,Not significative +422,rplL,-0.323,0.015492872418501,coding,1.8098680554586788,-1 < log2FC < 1 +423,gmk,-0.156,0.492466191923881,non-coding,0.3076235786991148,Not significative +424,argB,-0.276,0.226122133183437,coding,0.6456569261597975,Not significative +425,ychF,-0.421,0.0729959148702206,non-coding,1.136701443974944,Not significative +426,tcrA,-0.262,0.150394139181607,coding,0.8227690877515714,Not significative +427,aftA,-0.373,0.0757403567166178,non-coding,1.120672653800697,Not significative +428,lpdA,-0.078,0.774208014815255,coding,0.1111423370573354,Not significative +429,rslA,-0.834,0.0040390885068859,non-coding,2.39371663020931,-1 < log2FC < 1 +430,mmr,-0.319,0.458679832450544,pseudogene,0.3384903548058694,Not significative +431,lprN,-0.607,0.042720260236516,pseudogene,1.3693661104050934,-1 < log2FC < 1 +432,crgA,-0.077,0.684905135820461,coding,0.1643695771831179,Not significative +433,cspA,-0.469,0.0137155890616823,coding,1.8627855354349976,-1 < log2FC < 1 +434,radA,0.157,0.660611927376478,pseudogene,0.1800535893684538,Not significative +435,hpt,0.772,0.0114576462989928,pseudogene,1.9409045886815053,-1 < log2FC < 1 +436,rpsN,-0.67,1.06999685830165e-05,coding,4.970617497477651,-1 < log2FC < 1 +437,recO,0.314,0.330503070928657,non-coding,0.4808245008343956,Not significative +438,mraZ,-0.505,0.0004493437912174,coding,3.3474212547714965,-1 < log2FC < 1 +439,hspR,0.218,0.580729744811759,pseudogene,0.2360259289575864,Not significative +440,rpsT,1.088,0.141001284884103,coding,0.8507769297876462,Not significative +441,ruvC,1.768,1.77312063527571e-09,non-coding,8.751261715920634,log2FC > 1 +442,thiS,0.221,0.452158129374373,coding,0.3447096565496617,Not significative +443,efp,-0.02,0.97397462661319,pseudogene,0.0114523569462452,Not significative +444,bacA,0.073,0.742609292471168,pseudogene,0.1292396206314035,Not significative +445,sapM,0.29,0.158764824672956,non-coding,0.7992457118749512,Not significative +446,purH,0.046,0.880520149467887,pseudogene,0.0552607013632676,Not significative +447,hpnD,-0.282,0.27920704760952,non-coding,0.5540736236588479,Not significative +448,rpmB,0.647,0.0268990472718322,pseudogene,1.57026310185311,-1 < log2FC < 1 +449,pstC,0.853,6.6077835329797e-05,non-coding,4.179944192681058,-1 < log2FC < 1 +450,cobT,1.203,6.10769280470934e-06,non-coding,5.214122814538775,log2FC > 1 +451,nagA,-0.271,0.233989768247585,pseudogene,0.6308031327213354,Not significative +452,pheS,-0.749,0.000362734597597,non-coding,3.44041101947092,-1 < log2FC < 1 +453,rpfA,-3.348,4.95608074101769e-21,non-coding,20.304861627014937,log2FC < -1 +454,ggt,0.488,0.452541024499551,pseudogene,0.344342044290428,Not significative +455,nrdE,-0.244,0.526104248032157,non-coding,0.2789281914750773,Not significative +456,ahpE,0.666,0.0026654202339984,pseudogene,2.574234309744789,-1 < log2FC < 1 +457,ripA,-0.921,0.0868937594777432,coding,1.061011412523707,Not significative +458,eccC2,0.264,0.677672602093598,coding,0.1689800722765936,Not significative +459,cobB,0.993,0.198627120367738,coding,0.7019614536154362,Not significative +460,truA,-0.377,0.399142016325698,coding,0.3988725531031158,Not significative +461,kmtR,-0.315,0.254623881305263,coding,0.5941008660684353,Not significative +462,nadA,0.769,0.271705287778405,coding,0.565901909500267,Not significative +463,narK,-0.202,0.620616006540614,coding,0.2071770275552414,Not significative +464,mce4A,0.18,0.506038892360999,coding,0.295816103538319,Not significative +465,glbO,-0.588,0.0486825753021273,coding,1.3126264557106673,-1 < log2FC < 1 +466,marP,-0.025,0.969474683967082,pseudogene,0.01346352723195,Not significative +467,nrdI,0.606,0.0022111462349894,coding,2.655382534242266,-1 < log2FC < 1 +468,ugpC,-0.232,0.483098130666438,coding,0.3159646429995525,Not significative +469,cobM,-0.396,0.0795246210486259,non-coding,1.0994983917192824,Not significative +470,rfe,-0.064,0.758788902966999,pseudogene,0.1198790291479488,Not significative +471,arc,0.147,0.421360276421978,pseudogene,0.3753464097433695,Not significative +472,mmpL8,0.32,0.067007196806497,pseudogene,1.173878550052959,Not significative +473,ctaD,-0.381,0.10582217709873,non-coding,0.9754233078933692,Not significative +474,pstA,-0.528,0.0076282826980865,coding,2.117573220719893,-1 < log2FC < 1 +475,infB,-0.597,0.0736642539792122,non-coding,1.132743205025599,Not significative +476,hspX,0.535,3.58267644752501e-05,coding,4.445792411314596,-1 < log2FC < 1 +477,mmpL1,-0.157,0.389495575526918,non-coding,0.4094974713294362,Not significative +478,cas6,-0.248,0.306185414861046,non-coding,0.5140155007580353,Not significative +479,phoU,-0.851,9.59532236776062e-07,non-coding,6.0179404299761625,-1 < log2FC < 1 +480,fadD32,-0.798,4.73675192605301e-05,non-coding,4.3245193596181375,-1 < log2FC < 1 +481,vapC30,-1.062,1.38235344095428e-08,non-coding,7.859380902091134,log2FC < -1 +482,thiD,-0.663,0.000574606005815,non-coding,3.2406298390494617,-1 < log2FC < 1 +483,gcvH,-0.722,0.0146650475749676,pseudogene,1.8337165237838453,-1 < log2FC < 1 +484,purL,-1.085,1.55531999992536e-08,non-coding,7.808180243354725,log2FC < -1 +485,mbtD,-0.293,0.186972996131082,pseudogene,0.7282211125977852,Not significative +486,sigF,-0.066,0.817063217360687,coding,0.0877443401765626,Not significative +487,fadB2,0.287,0.150081042377183,coding,0.8236741625931654,Not significative +488,sucB,0.03,0.891416884293788,non-coding,0.0499191442164368,Not significative +489,glnX,0.729,0.0014215744067868,pseudogene,2.8472304039220293,-1 < log2FC < 1 +490,clpP2,-0.297,0.19277299659497,non-coding,0.7149538016113041,Not significative +491,purU,-0.255,0.264171214303856,pseudogene,0.5781145075015304,Not significative +492,gnd,-0.196,0.30239646217092,non-coding,0.5194232940856296,Not significative +493,regX,-0.282,0.147774739331089,non-coding,0.8303997980570279,Not significative +494,murG,0.083,0.710800975679731,coding,0.1482519847327568,Not significative +495,tsaD,0.015,0.944555225518356,coding,0.0247726450087165,Not significative +496,aceE,-0.555,0.0008597782557329,coding,3.065613542627512,-1 < log2FC < 1 +497,cut1,-0.248,0.339932493722042,non-coding,0.4686073197661869,Not significative +498,gyrA,0.091,0.739315395113467,pseudogene,0.1311702501893167,Not significative +499,pssA,0.265,0.345226473836892,pseudogene,0.4618959076253602,Not significative +500,lipA,-0.404,0.215094075317901,coding,0.6673715519192749,Not significative +501,secF,-0.849,5.58535377828992e-07,pseudogene,6.252949313310575,-1 < log2FC < 1 +502,cydC,0.385,0.324416449049725,pseudogene,0.4888971336519452,Not significative +503,greA,-0.335,0.365041600713005,coding,0.4376576398432714,Not significative +504,pyrR,0.013,0.953891259313289,coding,0.0205011307171573,Not significative +505,argF,0.079,0.651309982506173,non-coding,0.1862122654246849,Not significative +506,fabD,0.711,0.0016065002982792,non-coding,2.794119189476921,-1 < log2FC < 1 +507,mmuM,-0.535,0.0111087140164703,coding,1.9543362135952456,-1 < log2FC < 1 +508,ndk,-0.488,0.0061697270559248,pseudogene,2.209734048402367,-1 < log2FC < 1 +509,trcR,-0.3,0.0325987725246636,non-coding,1.4867987525640105,-1 < log2FC < 1 +510,rlmN,0.587,0.0768119820806407,non-coding,1.114571028072522,Not significative +511,mshD,0.324,0.140690553668467,pseudogene,0.851735061253114,Not significative +512,purD,-0.569,0.0390722214305495,non-coding,1.408131896489479,-1 < log2FC < 1 +513,pdxT,-0.688,0.0138971042101379,coding,1.857075685830564,-1 < log2FC < 1 +514,ftsE,1.366,1.20487432391514e-14,pseudogene,13.919058250414098,log2FC > 1 +515,rpsI,-0.415,0.0426371167275453,pseudogene,1.3702121715155997,-1 < log2FC < 1 +516,fhaB,-0.125,0.594703722295621,coding,0.2256993432101742,Not significative +517,fadD26,0.117,0.635452473767556,non-coding,0.1969169252867408,Not significative +518,clgR,0.573,0.0050133581307701,coding,2.29987127031976,-1 < log2FC < 1 +519,irtB,-0.822,0.0151429342550814,pseudogene,1.819789963190076,-1 < log2FC < 1 +520,pheA,-0.561,0.0188001399920791,non-coding,1.7258389168234956,-1 < log2FC < 1 +521,mgtA,-0.433,0.0877523813558445,non-coding,1.0567410891564997,Not significative +522,gyrB,-0.314,0.37943535944266,non-coding,0.4208621998172059,Not significative +523,fgd,-0.207,0.486868354098261,pseudogene,0.3125884531952252,Not significative +524,tpx,1.174,0.0550791986071674,pseudogene,1.2590123872788936,Not significative +525,sigI,-0.352,0.319445914722009,coding,0.4956026615310066,Not significative +526,mak,-0.29,0.422092340319974,coding,0.3745925288855152,Not significative +527,whiB3,0.27,0.326848206034132,coding,0.4856538943958307,Not significative +528,yhjD,0.416,0.0230354038580883,pseudogene,1.637604169267533,-1 < log2FC < 1 +529,rplI,0.066,0.780529888382755,non-coding,0.1076104620939715,Not significative +530,dusB,-0.704,0.0005914564757864,pseudogene,3.228077208806588,-1 < log2FC < 1 +531,frdD,-0.377,0.10508752452744,pseudogene,0.9784488382103882,Not significative +532,mycP3,0.641,1.71694268307986e-05,pseudogene,4.765244202706076,-1 < log2FC < 1 +533,atsD,0.534,0.0053602651831716,non-coding,2.270813724348408,-1 < log2FC < 1 +534,rsfA,0.228,0.512991873030491,non-coding,0.2898895150557663,Not significative +535,pimA,0.416,0.079704919296082,pseudogene,1.0985148736200343,Not significative +536,nrdR,-0.204,0.577484478418711,pseudogene,0.2384596842110468,Not significative +537,bioB,0.386,0.611204280517791,coding,0.2138136128768255,Not significative +538,hisD,0.056,0.862785573602777,non-coding,0.0640971252258296,Not significative +539,ffs,0.485,0.0005829968419706,non-coding,3.2343337977597795,-1 < log2FC < 1 +540,ppiB,0.223,0.28794732374151,pseudogene,0.5406869535629536,Not significative +541,egtA,0.075,0.748018475862221,non-coding,0.126087675042069,Not significative +542,eccCb1,-0.109,0.662677574694773,coding,0.1786977258795567,Not significative +543,prrA,-0.4,0.021821349370304,coding,1.6611183973793149,-1 < log2FC < 1 +544,dinG,0.496,0.206359144029359,non-coding,0.685376282233586,Not significative +545,pgi,-0.945,3.39354746171711e-08,non-coding,7.469346072443429,-1 < log2FC < 1 +546,truB,0.469,0.220967075290426,coding,0.655672432581542,Not significative +547,guaB,-0.027,0.938367117708423,pseudogene,0.0276272191874887,Not significative +548,pbpA,-0.219,0.431232814180194,non-coding,0.3652881994095249,Not significative +549,rimM,0.194,0.307030284748284,coding,0.5128187846193009,Not significative +550,murA,-0.32,0.0594748489935666,pseudogene,1.2256666519614656,Not significative +551,infA,-0.049,0.856470357871035,non-coding,0.067287663213136,Not significative +552,gap,0.069,0.779625922792543,coding,0.1081137288943509,Not significative +553,fprA,0.448,0.0653327915752837,coding,1.1848687846413548,Not significative +554,recB,-0.294,0.134118070977509,coding,0.8725127016632002,Not significative +555,sugB,-0.652,0.0003602574194658,coding,3.443387066170116,-1 < log2FC < 1 +556,sirA,-0.243,0.29493932858831,pseudogene,0.5302673127311542,Not significative +557,cas1,0.398,0.0803690368383259,non-coding,1.0949112363294229,Not significative +558,rbfA,0.197,0.346997758197138,pseudogene,0.4596733309894072,Not significative +559,nrtS,0.551,0.001516625481052,non-coding,2.8191216516414825,-1 < log2FC < 1 +560,tuf,0.136,0.640691012330293,coding,0.193351368286486,Not significative +561,idi,-0.143,0.536650079492099,non-coding,0.270308801972992,Not significative +562,relJ,0.369,0.103848363256431,non-coding,0.983600343946426,Not significative +563,hemL,0.563,0.0175570037947641,pseudogene,1.7555495969963169,-1 < log2FC < 1 +564,rsmI,0.013,0.972247509319419,coding,0.0122231607443679,Not significative +565,mmpL7,-0.095,0.889356208699754,pseudogene,0.0509242587281783,Not significative +566,espG3,0.165,0.548553923320675,coding,0.2607806744711423,Not significative +567,frr,-0.471,0.0030535230650639,coding,2.515198795172899,-1 < log2FC < 1 +568,lepB,0.241,0.164396116529031,non-coding,0.7841084458588208,Not significative +569,disA,-0.226,0.438003083241531,non-coding,0.3585228323496212,Not significative +570,prcB,-0.337,0.0328940332703118,pseudogene,1.482882872651459,-1 < log2FC < 1 +571,mbtG,-0.216,0.180481524771598,coding,0.7435672486082437,Not significative +572,ffh,-0.275,0.147948909664142,coding,0.829888231102141,Not significative +573,rimP,-0.037,0.850409636944741,non-coding,0.0703718269793394,Not significative +574,rfbC,0.874,1.39120174641173e-06,pseudogene,5.856609885823845,-1 < log2FC < 1 +575,nusG,1.368,7.42495119437618e-15,pseudogene,14.129306396702033,log2FC > 1 +576,glfT1,1.159,1.11775510844069e-14,pseudogene,13.951653336613113,log2FC > 1 +577,acs,0.254,0.389269618888727,coding,0.4097494901011357,Not significative +578,vapC20,-0.29,0.094776964776625,pseudogene,1.0232972036538173,Not significative +579,fadD5,-0.248,0.125538260516819,coding,0.9012238933145948,Not significative +580,kshA,1.14,0.001324946444797,pseudogene,2.8778016758397773,log2FC > 1 +581,pstC,-0.017,0.958020780412854,coding,0.0186250705448847,Not significative +582,mazF6,0.431,0.245621068871788,non-coding,0.6097343830426449,Not significative +583,mazE7,-0.089,0.918055520656327,coding,0.0371310534550241,Not significative +584,tesB,-0.035,0.903034571029542,coding,0.0442956231970499,Not significative +585,asnB,-0.666,0.006169750859832,coding,2.209732372820042,-1 < log2FC < 1 +586,esxL,0.356,0.0489672099344007,coding,1.3100946406134713,-1 < log2FC < 1 +587,gcvP,-0.239,0.29088155056131,coding,0.5362838234195334,Not significative +588,glgC,-0.517,0.0036925071773898,pseudogene,2.432678651846005,-1 < log2FC < 1 +589,rpmD,-0.121,0.616978279689359,pseudogene,0.2097301247464926,Not significative +590,mycP4,-0.279,0.118787615638128,pseudogene,0.92522883494727,Not significative +591,crcB,-0.051,0.910420954531261,non-coding,0.0407577549773789,Not significative +592,hsaC,0.133,0.773650971568628,coding,0.1114549247294214,Not significative +593,pknH,0.202,0.488721097152563,pseudogene,0.3109389129072118,Not significative +594,mycP1,-0.463,0.225889524573631,coding,0.646103908634102,Not significative +595,tgs1,1.513,2.97672115775054e-16,pseudogene,15.526261845676435,log2FC > 1 +596,dnaK,1.31,7.74577228415918e-15,coding,14.110935274866952,log2FC > 1 +597,vapC1,-0.178,0.323044568981907,coding,0.4907375559115872,Not significative +598,pdxS,-0.043,0.901907491457537,non-coding,0.0448380057062526,Not significative +599,mmpL9,-0.41,0.0107012591204621,pseudogene,1.970565119801028,-1 < log2FC < 1 +600,vapB4,1.502,2.40609845048853e-13,coding,12.61868660657674,log2FC > 1 +601,rimI,1.572,2.0647702808392402e-25,coding,24.68512825941363,log2FC > 1 +602,asd,-0.153,0.536429563934124,non-coding,0.2704872951387828,Not significative +603,sugC,-0.376,0.532040785109431,pseudogene,0.2740550743420915,Not significative +604,fadB,-0.004,0.990458420790399,coding,0.0041637513221162,Not significative +605,mazF9,-0.665,8.71939520877541e-05,coding,4.059513637384004,-1 < log2FC < 1 +606,rdgB,-0.067,0.794762120302369,non-coding,0.099762840273459,Not significative +607,rnj,0.064,0.832648914167579,coding,0.0795380799624685,Not significative +608,hsaA,-0.001,0.996562307545369,coding,0.0014955429472432,Not significative +609,mfd,-1.271,0.0108490265501246,pseudogene,1.9646092279790808,log2FC < -1 +610,rplN,-0.094,0.708890548266634,non-coding,0.1494208141163143,Not significative +611,ppsE,-0.413,0.0276800474787922,pseudogene,1.557833169281762,-1 < log2FC < 1 +612,hadC,0.303,0.116980414850912,non-coding,0.9318868428193162,Not significative +613,ogt,0.168,0.553157744451048,non-coding,0.257151002916756,Not significative +614,tesB,0.684,0.0249300732883959,non-coding,1.6032764447734371,-1 < log2FC < 1 +615,ptkA,0.194,0.648961896090818,non-coding,0.187780802126142,Not significative +616,dnaJ,1.5,0.0384881686211046,coding,1.4146727534071228,log2FC > 1 +617,ftsH,-0.265,0.41853322531608,pseudogene,0.3782700597766444,Not significative +618,mmaA4,-0.149,0.649229606498524,coding,0.187601683476496,Not significative +619,mnmA,-0.766,0.223739217047855,pseudogene,0.650257886020809,Not significative +620,ptpA,0.358,0.157609413305404,coding,0.8024178476046637,Not significative +621,mutT,0.89,0.0006771697379732,non-coding,3.169302458308098,-1 < log2FC < 1 +622,rnpB,-0.829,5.01055902653061e-05,pseudogene,4.300113817327682,-1 < log2FC < 1 +623,cas2,-0.506,0.161236864929317,pseudogene,0.7925356548078402,Not significative +624,opcA,-0.227,0.378920351290416,non-coding,0.4214520687398591,Not significative +625,uvrD2,-0.189,0.449277333113126,non-coding,0.347485491828105,Not significative +626,mutM,-0.529,0.0001926791039631,non-coding,3.715165382000463,-1 < log2FC < 1 +627,mcr,-0.534,0.0007702186460596,non-coding,3.11338597184316,-1 < log2FC < 1 +628,recX,-0.269,0.167067643866422,non-coding,0.77710765214683,Not significative +629,pks2,-0.485,0.0018254122807179,pseudogene,2.738639032018828,-1 < log2FC < 1 +630,aroA,-0.673,5.11093687881966e-06,pseudogene,5.291499482642805,-1 < log2FC < 1 +631,eccB1,0.06,0.794762120302369,coding,0.099762840273459,Not significative +632,esxO,-0.226,0.0761574037601766,non-coding,1.1182878696636007,Not significative +633,mmaA3,0.202,0.586865206677273,pseudogene,0.2314616376256088,Not significative +634,otsA,-0.101,0.556605000876528,coding,0.254452896019719,Not significative +635,lipN,0.012,0.960067902232055,non-coding,0.0176980497502033,Not significative +636,hadB,1.352,4.7986883251731405e-09,coding,8.318877456580005,log2FC > 1 +637,apa,-0.353,0.0345805329686129,pseudogene,1.4611683174951824,-1 < log2FC < 1 +638,rpsE,-0.503,0.0066500894725633,coding,2.1771725115120653,-1 < log2FC < 1 +639,ppx2,0.646,0.0019545635151993,coding,2.708950212234865,-1 < log2FC < 1 +640,sepF,0.833,0.0234682361297631,pseudogene,1.629519550703822,-1 < log2FC < 1 +641,rpmA,-0.211,0.479614629782043,coding,0.3191075779987338,Not significative +642,sigJ,-0.036,0.842026598594001,coding,0.0746741894502932,Not significative +643,pknJ,-0.057,0.812885284226539,pseudogene,0.0899707384681806,Not significative +644,rplD,0.374,0.151665254834762,pseudogene,0.8191139008339309,Not significative +645,rpfD,0.389,0.215094075317901,pseudogene,0.6673715519192749,Not significative +646,mce,-0.051,0.813026003853425,coding,0.0898955636932065,Not significative +647,ilvD,0.484,0.0333581601042395,coding,1.476797911230101,-1 < log2FC < 1 +648,mptB,-0.042,0.869431963440941,pseudogene,0.060764397627063,Not significative +649,nrdF,0.091,0.692997749956323,coding,0.1592681754648733,Not significative +650,sigL,-0.195,0.506038892360999,non-coding,0.295816103538319,Not significative +651,sigB,0.033,0.871543807439188,non-coding,0.0597107785471591,Not significative +652,canB,0.107,0.618198681736374,coding,0.2088719253730517,Not significative +653,ddlA,0.124,0.657313099387371,coding,0.182227712714362,Not significative +654,purQ,-0.169,0.579237524000536,coding,0.2371433115579679,Not significative +655,lipY,-0.322,0.144256148914622,coding,0.8408656659866122,Not significative +656,pyrF,-0.441,0.0553057795826475,coding,1.257229481539888,Not significative +657,eccD3,-0.487,0.0176326657294722,pseudogene,1.753682025529184,-1 < log2FC < 1 +658,proZ,-0.446,0.0224052532508315,non-coding,1.6496501428102075,-1 < log2FC < 1 +659,phoP,-0.149,0.496017478547584,coding,0.304503019673061,Not significative +660,mrx1,-0.796,0.0007323758158945,non-coding,3.135266005163595,-1 < log2FC < 1 +661,lysS,0.062,0.786429881444578,pseudogene,0.1043399932685674,Not significative +662,pgsA,-0.098,0.71073042758232,non-coding,0.14829509127176,Not significative +663,rsmD,0.398,0.0181817022511195,non-coding,1.7403654586465218,-1 < log2FC < 1 +664,trmI,0.336,0.270765975762493,coding,0.5674059096581098,Not significative +665,glnB,-0.617,0.012536555976719,coding,1.90182175582896,-1 < log2FC < 1 +666,rplU,-0.291,0.26862847928777,non-coding,0.5708479464630171,Not significative +667,hisN,-0.541,4.40455393281143e-05,coding,4.356098067803093,-1 < log2FC < 1 +668,rsmH,0.637,0.0022895682591738,coding,2.640246404269668,-1 < log2FC < 1 +669,egtC,1.13,3.72911432484195e-14,coding,13.428394302107474,log2FC > 1 +670,narL,0.086,0.787279648271187,non-coding,0.1038709752285789,Not significative +671,pknK,-1.162,7.83266565791518e-14,coding,13.106090411185148,log2FC < -1 +672,purT,-1.781,6.47334903167094e-07,coding,6.188870975951003,log2FC < -1 +673,serB,-0.994,0.0023071241998739,pseudogene,2.6369290253887465,-1 < log2FC < 1 +674,raaS,-0.302,0.157609413305404,pseudogene,0.8024178476046637,Not significative +675,hisB,-0.143,0.543548366518265,non-coding,0.2647618050691186,Not significative +676,eno,1.14,3.46343836100801e-11,non-coding,10.460492537119766,log2FC > 1 +677,acr2,0.278,0.282371638637138,pseudogene,0.5491789258990494,Not significative +678,fadD13,0.219,0.495765736500791,pseudogene,0.3047234916118363,Not significative +679,moaD,0.12,0.536429563934124,pseudogene,0.2704872951387828,Not significative +680,mtrA,0.621,0.225889524573631,pseudogene,0.646103908634102,Not significative +681,ag85C,0.031,0.890557839703941,coding,0.0503378688469894,Not significative +682,htpX,-0.031,0.887164446582971,pseudogene,0.0519958710092785,Not significative +683,sigC,0.206,0.386232423558831,coding,0.4131512707388776,Not significative +684,prfA,0.699,0.0475678290938465,pseudogene,1.3226866685102423,-1 < log2FC < 1 +685,eccE2,1.066,3.8813074888592814e-09,non-coding,8.411021949781256,log2FC > 1 +686,fadD3,1.349,1.4456658645377502e-14,pseudogene,13.83993207353949,log2FC > 1 +687,stp,1.088,1.22236178782811e-05,pseudogene,4.912800235007573,log2FC > 1 +688,dnaE2,1.553,4.62362658830397e-09,pseudogene,8.335017247508693,log2FC > 1 +689,gndA,0.365,0.0470548448670666,coding,1.3273956540495278,-1 < log2FC < 1 +690,rsgA,0.323,0.261994173631105,non-coding,0.5817083666497056,Not significative +691,thiC,0.143,0.73008039313887,pseudogene,0.1366293147093775,Not significative +692,rplV,0.24,0.406927365731553,non-coding,0.3904831030035007,Not significative +693,grpE,-0.075,0.678155968426166,pseudogene,0.1686704116831673,Not significative +694,cyp144,0.298,0.427831843306236,non-coding,0.368726894244354,Not significative +695,ftsZ,-0.331,0.0921839602270489,coding,1.0353446385003866,Not significative +696,cobO,0.254,0.306014750129303,non-coding,0.5142576397099994,Not significative +697,recC,0.347,0.0469772908094449,pseudogene,1.3281120326932545,-1 < log2FC < 1 +698,dapD,0.153,0.506038892360999,non-coding,0.295816103538319,Not significative +699,lprF,-0.006,0.980873344814631,pseudogene,0.0083870672370312,Not significative +700,nrnA,-0.094,0.647155179590868,non-coding,0.1889915685441238,Not significative +701,ideR,0.048,0.919097713304697,coding,0.036638314410231,Not significative +702,clpS,0.345,0.579876467145096,non-coding,0.23666451566359,Not significative +703,mftF,-0.926,0.144700152404685,non-coding,0.8395310114623111,Not significative +704,pgeF,-0.343,0.0134060574053135,coding,1.8726989252706896,-1 < log2FC < 1 +705,pcp,0.14,0.48439674367752,coding,0.3147987850327793,Not significative +706,ripD,0.218,0.517143916967497,coding,0.2863885794455528,Not significative +707,sthA,-0.891,0.0635948124901003,pseudogene,1.196578308861146,Not significative +708,coaBC,-0.896,0.0050683719936062,coding,2.2951315175372806,-1 < log2FC < 1 +709,tsaE,0.21,0.652906069518297,non-coding,0.1851492941064388,Not significative +710,cysE,1.568,1.30701562099074e-16,non-coding,15.883719221853626,log2FC > 1 +711,mbtK,0.697,0.0005473278707437,pseudogene,3.261752436377848,-1 < log2FC < 1 +712,aroK,-0.835,0.0008597782557329,non-coding,3.065613542627512,-1 < log2FC < 1 +713,embB,-0.501,0.0295357190578382,coding,1.5296524516201515,-1 < log2FC < 1 +714,cobN,-0.879,0.0013009869978034,non-coding,2.8857270438000224,-1 < log2FC < 1 +715,scpA,-0.518,0.0524264268392986,pseudogene,1.2804497409293536,Not significative +716,priA,-0.569,0.118022923837657,non-coding,0.9280336305813484,Not significative +717,ppa,-0.761,0.012676009803902,non-coding,1.8970174335887984,-1 < log2FC < 1 +718,mntR,-0.461,0.136939976249517,coding,0.8634697517915026,Not significative +719,ctpD,0.676,0.0005216173434559,coding,3.2826479770116173,-1 < log2FC < 1 +720,ssd,0.647,0.0327940749957305,pseudogene,1.4842046144925616,-1 < log2FC < 1 +721,cya,1.011,7.548660210864621e-15,coding,14.12213012316047,log2FC > 1 +722,msrB,-0.893,0.0004942177290299,coding,3.306081679246061,-1 < log2FC < 1 +723,tatB,1.009,0.000592296650336,non-coding,3.2274607234534427,log2FC > 1 +724,cut4,1.849,2.0724435613011288e-11,pseudogene,10.68351728772545,log2FC > 1 +725,pknB,1.845,6.92192314502608e-16,coding,15.15977322704079,log2FC > 1 +726,eccA5,0.957,3.45384653654595e-14,coding,13.461696963181971,-1 < log2FC < 1 +727,rskA,-0.013,0.953387044224851,coding,0.020730754087062,Not significative +728,acg,-0.517,0.0304489082577654,pseudogene,1.516428274332522,-1 < log2FC < 1 +729,rpsB,1.142,7.54169117758344e-12,coding,11.12253125535885,log2FC > 1 +730,glnA,-0.113,0.631000382592452,non-coding,0.199970377431396,Not significative +731,mtrB,0.147,0.632811274663063,coding,0.1987257917096005,Not significative +732,folP,-0.63,0.0007557470469159,pseudogene,3.1216235411539626,-1 < log2FC < 1 +733,treY,-0.543,4.23981249573614e-05,coding,4.372653349508153,-1 < log2FC < 1 +734,cysQ,0.325,0.0241669553684702,coding,1.6167780599755126,-1 < log2FC < 1 +735,eccE5,0.25,0.275983104644201,coding,0.5591175041100976,Not significative +736,moaA,-0.021,0.918088329211007,coding,0.0371155333482969,Not significative +737,dacB2,0.342,0.0557462869748721,non-coding,1.253784053840797,Not significative +738,rpsM,0.241,0.226375865357764,coding,0.6451698765149544,Not significative +739,desA3,0.614,0.375493785951283,coding,0.4253972457420992,Not significative +740,mycP5,-0.251,0.215094075317901,pseudogene,0.6673715519192749,Not significative +741,ephG,-1.01,6.70041635084706e-05,pseudogene,4.1738982102458255,log2FC < -1 +742,mhuD,-0.306,0.0536350857177716,coding,1.2705510209663338,Not significative +743,vapc11,-0.243,0.138339640256617,coding,0.8590533580108819,Not significative +744,whiB1,-0.182,0.477504548062644,coding,0.321022487558553,Not significative +745,mgtE,0.23,0.349462265008619,pseudogene,0.4565997125743637,Not significative +746,mftR,0.313,0.245023594263651,non-coding,0.6107920937369464,Not significative +747,ribD,0.352,0.105974742086206,pseudogene,0.9747976317134932,Not significative +748,moaC,0.086,0.769610837404574,pseudogene,0.113728825336322,Not significative +749,galE1,0.456,0.0973627464784148,coding,1.0116071837139338,Not significative +750,rplT,0.09,0.832648914167579,coding,0.0795380799624685,Not significative +751,espK,-0.636,1.21922004732737e-05,coding,4.913917904951264,-1 < log2FC < 1 +752,sdhB,-0.575,0.0118342941235497,coding,1.926857641189878,-1 < log2FC < 1 +753,nuoN,0.597,0.100666376874966,non-coding,0.9971155619789124,Not significative +754,mmpL4,-0.342,0.249038787750024,coding,0.6037330063423924,Not significative +755,eccB2,1.902,2.06982050063918e-09,pseudogene,8.684067315877407,log2FC > 1 +756,ftsX,0.139,0.621454587808515,coding,0.2065906015110704,Not significative +757,aceA,0.131,0.518285497002424,coding,0.2854309436974991,Not significative +758,mbtC,-0.173,0.339228014085532,pseudogene,0.4695082900816334,Not significative +759,sigG,-0.8,0.0001704944573251,pseudogene,3.768289735101109,-1 < log2FC < 1 +760,pyk,0.536,0.285369910759572,non-coding,0.5445918205695779,Not significative +761,moaA,-0.963,3.5779337611069e-07,non-coding,6.446367703861448,-1 < log2FC < 1 +762,secA,-1.241,4.6768109050156e-08,non-coding,7.330050189332136,log2FC < -1 +763,mazE4,0.959,0.117223583655051,coding,0.9309850058871452,Not significative +764,trmB,-0.853,0.003425765010833,coding,2.465242430628725,-1 < log2FC < 1 +765,trpB,2.855,3.861707197359929e-30,coding,29.413220658415664,log2FC > 1 +766,cmrA,-0.107,0.702749712476425,coding,0.1531993234080742,Not significative +767,mscL,-0.336,0.0505347829608322,pseudogene,1.2964095951876042,Not significative +768,nusB,-0.156,0.578477336964325,pseudogene,0.2377136507556767,Not significative +769,oppA,0.291,0.171683839242754,pseudogene,0.7652705834530333,Not significative +770,iniR,-0.073,0.767062611692956,pseudogene,0.1151691851997157,Not significative +771,narI,0.996,1.08802817840575e-05,coding,4.96335985687345,-1 < log2FC < 1 +772,wbbL,-0.323,0.310809404166186,coding,0.5075058492157394,Not significative +773,rpmH,-0.715,4.7211881590262687e-11,pseudogene,10.325948690778564,-1 < log2FC < 1 +774,prp1,-0.211,0.161326760395608,pseudogene,0.7922935871789825,Not significative +775,eccC3,-0.321,0.347358102922577,coding,0.4592225657589157,Not significative +776,cwlM,-0.62,0.0197975832787738,coding,1.703387821493593,-1 < log2FC < 1 +777,aac(2')-Ic,0.093,0.79971158771893,coding,0.0970666110654819,Not significative +778,cmr,-1.528,1.6145913478418501e-10,coding,9.791937379112982,log2FC < -1 +779,rplO,-1.04,0.0007607483104891,coding,3.118759003473345,log2FC < -1 +780,eccA1,-0.665,0.001588069683695,coding,2.799130444868469,-1 < log2FC < 1 +781,nrdH,-0.365,0.330981202161942,non-coding,0.4801966709649592,Not significative +782,rpsD,-0.161,0.579891234640532,non-coding,0.2366534557905311,Not significative +783,arcA,-0.643,0.0514250590831831,pseudogene,1.2888252006641443,Not significative +784,atpD,0.115,0.490968534501155,coding,0.3089463403218467,Not significative +785,dacB1,0.145,0.392042443820692,pseudogene,0.4066669122671292,Not significative +786,carA,0.316,0.0807398180944442,coding,1.0929122333833228,Not significative +787,rfbA,0.015,0.982728532669281,coding,0.0075664344018971,Not significative +788,ispH,1.683,3.04985228341829e-05,non-coding,4.515721194767928,log2FC > 1 +789,ethA,1.399,0.0052457030302221,pseudogene,2.280196299332104,log2FC > 1 +790,mtr,1.164,0.0857472509043923,pseudogene,1.0667797947393167,Not significative +791,ramB,-0.102,0.807978290903147,coding,0.0926003078734693,Not significative +792,rsmA,0.811,0.0008340992289849,non-coding,3.078782280253028,-1 < log2FC < 1 +793,htdX,0.71,0.0004701021501789,coding,3.327807762407374,-1 < log2FC < 1 +794,trmD,0.396,0.0610261797459562,non-coding,1.214483816135167,Not significative +795,mbtI,0.627,0.0001682424508697,pseudogene,3.7740644136964754,-1 < log2FC < 1 +796,rsfS,0.914,2.23218550047034e-08,coding,7.651269717224101,-1 < log2FC < 1 +797,typA,0.612,0.0001445011860704,non-coding,3.840128588189677,-1 < log2FC < 1 +798,garA,0.403,0.163957490630771,pseudogene,0.7852687371812793,Not significative +799,idsA1,0.426,0.0148703848512395,pseudogene,1.8276777916255345,-1 < log2FC < 1 +800,recG,-0.122,0.65435245709923,non-coding,0.1841882624686571,Not significative +801,rseA,-0.121,0.570286467007508,non-coding,0.243906934172736,Not significative +802,murJ,0.545,0.0324490959961807,coding,1.488797397764663,-1 < log2FC < 1 +803,tcrX,-0.235,0.215574717908494,coding,0.6664021735254361,Not significative +804,kstR2,-0.637,0.000170835100537,pseudogene,3.767422892409444,-1 < log2FC < 1 +805,cpnT,-0.598,0.0004726502461983,pseudogene,3.3254601115510547,-1 < log2FC < 1 +806,aroQ,-0.028,0.878247647748489,pseudogene,0.0563830047254834,Not significative +807,rsmG,-0.033,0.869431963440941,coding,0.060764397627063,Not significative +808,rpsA,0.545,0.150394139181607,pseudogene,0.8227690877515714,Not significative +809,uvrA,-0.686,0.137399050522958,non-coding,0.862016268397755,Not significative +810,mbtJ,-0.44,0.206359144029359,coding,0.685376282233586,Not significative +811,lpqH,0.185,0.654722323981886,pseudogene,0.1839428507431054,Not significative +812,pknG,0.326,0.40984909773288,non-coding,0.3873760166590075,Not significative +813,vapB33,0.033,0.911417356568763,pseudogene,0.0402827051915067,Not significative +814,ggtA,0.17,0.495765736500791,pseudogene,0.3047234916118363,Not significative +815,ppiA,0.321,0.189595881717405,pseudogene,0.7221711003673125,Not significative +816,hisF,0.109,0.692997749956323,non-coding,0.1592681754648733,Not significative +817,ephB,0.02,0.953891259313289,non-coding,0.0205011307171573,Not significative +818,grcC,-0.128,0.613402887391384,pseudogene,0.2122541840509675,Not significative +819,mmcO,0.033,0.889304603448173,non-coding,0.0509494595712531,Not significative +820,pcrA,0.289,0.343046351658303,coding,0.4646471950902084,Not significative +821,pknF,0.352,0.149540970340112,pseudogene,0.8252398056340432,Not significative +822,pknI,-0.024,0.91467981308638,coding,0.0387309056552382,Not significative +823,bcpB,-0.238,0.264171214303856,non-coding,0.5781145075015304,Not significative +824,folK,1.72,2.85894980835398e-28,coding,27.54379346903734,log2FC > 1 +825,lprM,1.528,4.16522153125006e-21,pseudogene,20.380361895279783,log2FC > 1 +826,htdY,-0.806,4.57211952498283e-05,coding,4.339882424741765,-1 < log2FC < 1 +827,eccD4,-1.366,1.40676330398588e-13,coding,12.851778968962076,log2FC < -1 +828,fhaA,-0.214,0.162715006506195,pseudogene,0.7885723921012775,Not significative +829,esxJ,-0.032,0.914995891432553,coding,0.0385808560233624,Not significative +830,tatC,0.008,0.97179871111989,non-coding,0.0124236812700189,Not significative +831,moeZ,-0.533,0.0019223959571764,pseudogene,2.716157155530117,-1 < log2FC < 1 +832,glpX,-0.7,0.0011934568500564,non-coding,2.923193278476387,-1 < log2FC < 1 +833,zur,-0.796,0.000779090139124,non-coding,3.108412292443661,-1 < log2FC < 1 +834,mazF3,-0.654,7.20848751467301e-05,coding,4.142155849419028,-1 < log2FC < 1 +835,pbpB,-0.324,0.0100742692629791,pseudogene,1.996786445590356,-1 < log2FC < 1 +836,serS,-0.13,0.670800955262571,non-coding,0.1734063276029704,Not significative +837,pstS,-0.16,0.589416434191612,pseudogene,0.2295777592576759,Not significative +838,mec,-0.184,0.580939962004581,pseudogene,0.2358687480182804,Not significative +839,sufR,-0.507,0.0342114989723007,non-coding,1.465827896842799,-1 < log2FC < 1 +840,eccC5,-0.223,0.572206682154476,coding,0.242447074867227,Not significative +841,hisC,-0.88,1.2610626486922e-06,pseudogene,5.899263337451127,-1 < log2FC < 1 +842,rpmB,-1.212,2.55386035469158e-11,coding,10.592802853683777,log2FC < -1 +843,rpmI,0.36,0.216757604883368,pseudogene,0.6640256564771576,Not significative +844,aftB,0.433,0.0017063421270183,coding,2.767933887014104,-1 < log2FC < 1 +845,lnt,0.197,0.49058222483357,non-coding,0.309288191548602,Not significative +846,rplS,0.074,0.793459171942715,coding,0.1004754152937194,Not significative +847,leuA,0.18,0.213664310065593,coding,0.6702680152062417,Not significative +848,yajC,-0.459,0.0410802744425735,non-coding,1.3863666636994638,-1 < log2FC < 1 +849,mmsB,0.183,0.624286315551019,coding,0.2046161847640757,Not significative +850,scpB,0.066,0.726755827883882,coding,0.1386114769188515,Not significative +851,pknE,-0.434,0.0502899237676512,non-coding,1.2985190227070411,Not significative +852,rpmG,0.108,0.562663703810809,coding,0.2497510993174743,Not significative +853,cwsA,0.257,0.14608392036459,pseudogene,0.8353975847586909,Not significative +854,rfbB,-0.299,0.0818826976832634,non-coding,1.086807857635624,Not significative +855,dprA,-0.412,0.0106708561405092,non-coding,1.9718007350101383,-1 < log2FC < 1 +856,trxA,-0.108,0.579876467145096,non-coding,0.23666451566359,Not significative +857,rpsJ,-0.247,0.40300169610233,pseudogene,0.3946931260516136,Not significative +858,lmeA,-0.651,0.0002960572455456,coding,3.5286243057626367,-1 < log2FC < 1 +859,rpsC,-0.853,2.2767630356386e-05,coding,4.642682168185871,-1 < log2FC < 1 +860,recR,-0.717,8.23594532401276e-08,pseudogene,7.08428654519611,-1 < log2FC < 1 +861,mbtM,-0.234,0.186821482441797,coding,0.7285731860850355,Not significative +862,purS,-0.303,0.0485837131934595,pseudogene,1.3135092956691576,-1 < log2FC < 1 +863,pknA,0.051,0.817063217360687,pseudogene,0.0877443401765626,Not significative +864,ppx1,-0.004,0.989487674172953,coding,0.0045896113332919,Not significative +865,sufC,-0.412,0.0868937594777432,non-coding,1.061011412523707,Not significative +866,mce3R,-0.064,0.8206417148151,coding,0.0858464107744743,Not significative +867,hrp1,-0.945,0.0014926687556233,non-coding,2.826036557690784,-1 < log2FC < 1 +868,mmpL10,-0.744,0.0067133682030815,coding,2.1730595327374327,-1 < log2FC < 1 +869,cyp130,-0.701,6.26030977818633e-05,coding,4.203404176114124,-1 < log2FC < 1 +870,cyp125,-0.801,5.75226342775954e-05,non-coding,4.240161233438337,-1 < log2FC < 1 +871,recD,-0.716,0.0005600282302506,coding,3.251790080256224,-1 < log2FC < 1 +872,modB,0.065,0.836636569408947,coding,0.0774631563159812,Not significative +873,corA,-0.057,0.863953477751968,pseudogene,0.0635096428215457,Not significative +874,ag85A,-0.28,0.392421257043862,coding,0.4062474753827938,Not significative +875,rsmA,-0.398,0.0333500768186247,non-coding,1.4769031613916184,-1 < log2FC < 1 +876,ybeY,-0.23,0.264171214303856,pseudogene,0.5781145075015304,Not significative +877,lsr2,0.282,0.214553915302569,pseudogene,0.6684635558048786,Not significative +878,dfrA,0.403,0.0671583804330532,coding,1.1728997856946366,Not significative +879,esxJ,0.072,0.748153353912481,coding,0.1260093728150778,Not significative +880,bcp,-0.516,0.0088842101638362,pseudogene,2.051381176382593,-1 < log2FC < 1 +881,narI,-0.52,0.0134125589451558,non-coding,1.8724883563960093,-1 < log2FC < 1 +882,mazF7,-0.223,0.0888496883273991,non-coding,1.0513440913018777,Not significative +883,proV,-0.047,0.843296760711565,non-coding,0.0740195678903693,Not significative +884,oxyS,0.419,0.0136581595097067,coding,1.8646078195879672,-1 < log2FC < 1 +885,ruvB,-0.313,0.159809931046832,coding,0.7963962358804453,Not significative +886,lepA,-0.084,0.569384681246843,coding,0.2445942213117528,Not significative +887,pcaA,0.311,0.0996573403870398,coding,1.0014907072777983,Not significative +888,mshA,0.277,0.374601030133949,coding,0.4264310326712071,Not significative +889,cpdA,1.043,8.068310424785881e-09,coding,8.09321740084375,log2FC > 1 +890,ethR,1.975,3.3769235274556904e-35,coding,34.47147877412327,log2FC > 1 +891,whiB5,2.103,2.61948808058501e-26,coding,25.581783573374818,log2FC > 1 +892,hsaB,0.822,9.59532236776062e-07,pseudogene,6.0179404299761625,-1 < log2FC < 1 +893,lppM,0.638,0.0508175581586859,non-coding,1.2939862071267865,Not significative +894,nudC,-0.085,0.734671898045967,coding,0.1339065720475276,Not significative +895,smpB,-0.652,0.0001453512356383,pseudogene,3.8375812719182223,-1 < log2FC < 1 +896,ctpG,0.828,2.11769375278197e-07,non-coding,6.674136844555886,-1 < log2FC < 1 +897,narJ,0.264,0.336567337552628,pseudogene,0.4729280327717816,Not significative +898,ftsY,-0.603,0.01298148663485,coding,1.8866755694507893,-1 < log2FC < 1 +899,mmpL2,-0.633,0.0004650084350688,non-coding,3.332539169108737,-1 < log2FC < 1 +900,pks13,-0.061,0.744375384526644,coding,0.1282079968268749,Not significative +901,chsH2,1.802,7.194803573806849e-11,non-coding,10.142981058291138,log2FC > 1 +902,vapC26,1.76,0.0005151378058374,pseudogene,3.28807657618414,log2FC > 1 +903,iniB,1.375,9.83646861224346e-06,coding,5.0071607895242485,log2FC > 1 +904,folP,1.309,4.6768109050156e-08,coding,7.330050189332136,log2FC > 1 +905,sufB,0.713,3.21561656420796e-07,pseudogene,6.492735742876498,-1 < log2FC < 1 +906,gabT,0.834,7.18132129144019e-08,coding,7.143795642555922,-1 < log2FC < 1 +907,aftC,0.243,0.301823193976795,pseudogene,0.5202473893812081,Not significative +908,espA,0.19,0.264311054439333,coding,0.5778846727305432,Not significative +909,xerD,0.13,0.550220970935246,coding,0.2594628610784795,Not significative +910,mshB,1.111,1.55079140559248e-11,pseudogene,10.809446614496208,log2FC > 1 +911,orn,1.017,3.61900536930186e-06,pseudogene,5.441410772554569,log2FC > 1 +912,lprG,0.899,4.25638017902706e-05,non-coding,4.370959587884157,-1 < log2FC < 1 +913,purE,0.676,1.49008300424942e-08,pseudogene,7.826789538780039,-1 < log2FC < 1 +914,mftD,1.287,4.47766032848787e-06,coding,5.348948854718246,log2FC > 1 +915,vapC29,1.291,1.8542781381756e-06,coding,5.731825121963371,log2FC > 1 +916,csm3,1.197,2.2316246108635e-06,non-coding,5.651378857736988,log2FC > 1 +917,mftG,1.105,6.28975220589861e-05,non-coding,4.201366463891884,log2FC > 1 +918,fabG1,0.184,0.287486977141051,coding,0.5413818236139268,Not significative +919,iniA,0.366,0.023769316426424,pseudogene,1.6239833078174997,-1 < log2FC < 1 +920,sucC,-0.439,0.0249351222001207,coding,1.6031884990835543,-1 < log2FC < 1 +921,pdc,-0.195,0.362976858346488,pseudogene,0.4401210626024402,Not significative +922,manA,-0.48,0.0048895887341969,pseudogene,2.3107276680706907,-1 < log2FC < 1 +923,dapA,0.025,0.937178950453205,pseudogene,0.0281774744548045,Not significative +924,treZ,0.514,0.033574926734243,coding,1.4739849263568998,-1 < log2FC < 1 +925,rpmF,0.406,0.182697252499378,pseudogene,0.7382679837549132,Not significative +926,dprE1,-0.096,0.628736781506683,pseudogene,0.2015311323997177,Not significative +927,rplR,0.409,0.0327464757638849,non-coding,1.4848354327303783,-1 < log2FC < 1 +928,metE,0.445,0.229013022421524,non-coding,0.6401398215683698,Not significative +929,ephA,-0.018,0.930157698434858,coding,0.0314434151513729,Not significative +930,eccD5,-0.205,0.335175943698268,coding,0.4747271591766321,Not significative +931,lprJ,0.364,0.0125351824802559,coding,1.9018693394407984,-1 < log2FC < 1 +932,mtp,-0.753,0.0023429343676909,pseudogene,2.6302398770662507,-1 < log2FC < 1 +933,embA,-0.853,0.0043354771850735,non-coding,2.3629630948569846,-1 < log2FC < 1 +934,nrp,-0.489,0.0136581595097067,non-coding,1.8646078195879672,-1 < log2FC < 1 +935,ilvA,-0.362,0.191232963830647,coding,0.7184372439855538,Not significative +936,bluB,-0.267,0.235382237613613,non-coding,0.6282263129345828,Not significative +937,choD,0.162,0.607918976409117,coding,0.216154299745784,Not significative +938,aroC,0.357,0.299900002717997,pseudogene,0.5230235303044573,Not significative +939,pptT,0.161,0.911266163694272,non-coding,0.0403547552545211,Not significative +940,lipD,-1.277,0.0172222288466035,coding,1.7639106442213874,log2FC < -1 +941,espI,0.448,0.139865440882767,pseudogene,0.8542895813481641,Not significative +942,miaB,-0.689,0.0132734922010232,coding,1.8770148010161043,-1 < log2FC < 1 +943,secE,0.223,0.693116004590323,coding,0.1591940728380697,Not significative +944,rpsP,0.439,0.298744151137035,coding,0.5247005886505891,Not significative diff --git a/notebooks/interactivity_cours.ipynb b/notebooks/interactivity_cours.ipynb new file mode 100644 index 0000000000000000000000000000000000000000..9abe0cd6c8768fd996b2680b14278626b9379981 Binary files /dev/null and b/notebooks/interactivity_cours.ipynb differ