diff --git a/Thursday/OmicNet_practical.md b/Thursday/OmicNet_practical.md index dfbce4fa8cf110b8d9c97a6372905290eaec9c2d..d08164018e673ac7639caa1b7585ce1958b07d93 100644 --- a/Thursday/OmicNet_practical.md +++ b/Thursday/OmicNet_practical.md @@ -18,12 +18,12 @@ OmicsNet is a web-based tool to explore multi-omics data and perform visual anal 2. For the second case, change the database used for building the network and calculate the network size, in terms of number of nodes and edges. -* Explain why are networks bigger or smaller depending on the interaction database. +* What is the size of the network? Explain why are networks bigger or smaller depending on the interaction database. -3. Choose the interaction network for the second case, and choose the database with fewest interactions. Control the network size by trimming with the Shortest path-based algorithm. Proceed to the network visualization. +3. Choose the interaction network for the second case, and choose the database with fewest interactions. Control the network size by trimming with e.g. Minimum Network algorithm. Proceed to the network visualization. -* What is the size of the network? What are the 5 top "hubs" of your network? +* What are the 5 top "hubs" of your network? 4. Identify the network modules using the different algorithms in the Module Explorer section.