diff --git a/README.md b/README.md index be75fd29a0253d73b26f147e67d3940e8ee7e18e..a087808434c1a91955f83f71473898017d3ff85d 100644 --- a/README.md +++ b/README.md @@ -8,20 +8,15 @@ | Functional annotation 0: Exploring PATRIC | [Hands-on](Monday/Exploring_PATRIC.md) | Functional annotation I: Annotation using Gene Ontology and Kegg | [Hands-on](Monday/practicals_day1_PHINDAccess.Rmd) | Functional annotation II: Advanced annotations with MSigDB| [Hands-on](Monday/AnnotationMSigDB.md) -| Functional analysis: ORA and GSEA | [Hands-on](Tuesday/ORA_and_GSEA.Rmd) | +| Functional analysis: GSEA | [Hands-on](Tuesday/practicals_day2_PHINDAccess.Rmd ) | | Functional analysis: GREAT | [Hands-on](Tuesday/GREAT/GREAT_analysis_forEpigenomicData.md) | | Functional analysis: methylGSA | [Hands-on](Tuesday/methylGSA_Functional_analysis/FuncAnalysis_methylGSA.Rmd) | | Single OMICs: Descriptive analysis | [DEMO](Wednesday/Descriptive/Descriptive_analysis.Rmd) | | Single OMICs: Discriminative analysis | [Hands-on](Wednesday/SDA/SDA.Rmd) | | Integration: MFA | [Hands-on](Wednesday/MFA/MFA.Rmd) | -| Integration: ICA | [Hands-on](Wednesday/ICA/ICA.Rmd) | -| Networks: PPIs | [Hands-on](Thursday/STRING.md ) | -| Networks: Regulatory networks | [Hands-on](Thursday/OmicsNet.md) | - - -## Friday session : questions -Feel free to add your questions here: -https://docs.google.com/document/d/1MjZz2wyQqiZbSD386N6xOYZvPDgibRvBerXzbgKRJp8/edit?usp=sharing +| Networks 1: PPIs | [Hands-on](Thursday/String_DB_HandsOn_Diabetes.md) | +| Networks 2: PPIs | [Hands-on]( Thursday/StringDB-HandsOn_CANCER.md) | +| Networks 3: Regulatory networks | [Hands-on](Thursday/OmicsNet_practical.md) | ## Trainers