From be11af6eee2a68ae20b63c63ddacf3e126be9d26 Mon Sep 17 00:00:00 2001
From: Simon Malesys <simon.malesys@pasteur.fr>
Date: Thu, 13 Feb 2025 17:16:06 +0100
Subject: [PATCH] Add the tests to the CI
---
.gitlab-ci.yml | 20 +++++++++++++++-----
1 file changed, 15 insertions(+), 5 deletions(-)
diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index 8efadc91..31fe65ea 100644
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -16,25 +16,35 @@ workflow:
# Pipeline start
# =============================================================================
+# Run the unit tests
+testing:
+ image: node:22-alpine
+ stage: validate
+ rules:
+ - changes:
+ - src/**/*
+ script:
+ - npm test
+
# Validate the fasta files if they have changed
validate-fasta-files:
+ image: node:22-alpine
stage: validate
rules:
- changes:
- data/*.fasta
- image: node:22-alpine
script:
- npm run validate
# Build the archive of the fasta files and compute the stats.
# Commit the files in the data folder, triggering another CI.
build-archive-and-stats:
+ image: node:22-alpine
stage: archive
rules:
- if: $CI_COMMIT_BRANCH == "master"
changes:
- data/*.fasta
- image: node:22-alpine
script:
- export CURRENT_DATE=$(date +'%Y-%m-%d')
- export ARCHIVE_PATH=data/${CURRENT_DATE}.tar.gz
@@ -54,10 +64,10 @@ build-archive-and-stats:
# Build the docker image and store it the gitlab registery.
build-docker-image:
+ image: docker:24
stage: build
rules:
- if: $CI_COMMIT_BRANCH == "master" || $CI_COMMIT_BRANCH == "dev"
- image: docker:24
interruptible: true
script:
- docker login -u "$CI_REGISTRY_USER" -p "$CI_REGISTRY_PASSWORD" $CI_REGISTRY
@@ -68,10 +78,10 @@ build-docker-image:
# Fetch the image of MongoDB from the DockerHub and store it if there is any changes.
# This avoid issues with Docker in case of overpulling.
fetch-mongo-image:
+ image: docker:24
stage: build
rules:
- if: $CI_COMMIT_BRANCH == "master" || $CI_COMMIT_BRANCH == "dev"
- image: docker:24
interruptible: true
script:
- docker login -u "$CI_REGISTRY_USER" -p "$CI_REGISTRY_PASSWORD" $CI_REGISTRY
@@ -81,8 +91,8 @@ fetch-mongo-image:
# Base stage for deploy-dev and deploy-prod
.deploy:
- stage: deploy
image: registry-gitlab.pasteur.fr/dsi-tools/docker-images:docker_kubernetes_image
+ stage: deploy
interruptible: true
script:
- kubectl delete secret registry-gitlab -n ${NAMESPACE} --ignore-not-found=true
--
GitLab