From 3a08b07a48f14268adb64e2103f7fb66b06f1319 Mon Sep 17 00:00:00 2001
From: Simon Malesys <simon.malesys@pasteur.fr>
Date: Thu, 6 Feb 2025 16:05:58 +0100
Subject: [PATCH 1/3] Fix TS errors
---
src/client/components/AdvancedSearch.vue | 2 +-
src/client/store.ts | 2 +-
2 files changed, 2 insertions(+), 2 deletions(-)
diff --git a/src/client/components/AdvancedSearch.vue b/src/client/components/AdvancedSearch.vue
index f8a1f5f..21a3c6a 100644
--- a/src/client/components/AdvancedSearch.vue
+++ b/src/client/components/AdvancedSearch.vue
@@ -177,7 +177,7 @@
</template>
<script setup lang="ts">
-import { computed, onMounted, ref } from 'vue'
+import { computed, ref } from 'vue'
import { useStore } from '../store'
import type { AdvancedFilters, FilterChip } from '../types'
import AppCheckbox from './AppCheckbox.vue'
diff --git a/src/client/store.ts b/src/client/store.ts
index ae35b5c..0046d6d 100644
--- a/src/client/store.ts
+++ b/src/client/store.ts
@@ -13,7 +13,7 @@ import type {
FastaHeader,
Statistics
} from './types'
-import alphanumSort from './utils/alphanumSort'
+// import alphanumSort from './utils/alphanumSort'
export const useStore = defineStore('store', {
state: (): AppState => {
--
GitLab
From 0c6a0fb3870c997729901e37aaa327222486d869 Mon Sep 17 00:00:00 2001
From: Simon Malesys <simon.malesys@pasteur.fr>
Date: Thu, 6 Feb 2025 16:17:58 +0100
Subject: [PATCH 2/3] Fix sorting of the segments
---
src/client/store.ts | 40 ++++++++--------------------------------
1 file changed, 8 insertions(+), 32 deletions(-)
diff --git a/src/client/store.ts b/src/client/store.ts
index 0046d6d..948e4ec 100644
--- a/src/client/store.ts
+++ b/src/client/store.ts
@@ -13,7 +13,7 @@ import type {
FastaHeader,
Statistics
} from './types'
-// import alphanumSort from './utils/alphanumSort'
+import alphanumSort from './utils/alphanumSort'
export const useStore = defineStore('store', {
state: (): AppState => {
@@ -41,11 +41,15 @@ export const useStore = defineStore('store', {
return state.statistics?.species || []
},
antibodiesHeavySegments: (state) => {
- return Object.keys(state.statistics?.antibodiesPerHeavySegment || {})
+ return Object
+ .keys(state.statistics?.antibodiesPerHeavySegment || {})
+ .sort(alphanumSort)
},
antibodiesLightSegments: (state) => {
- return Object.keys(state.statistics?.antibodiesPerLightSegment || {})
- },
+ return Object
+ .keys(state.statistics?.antibodiesPerLightSegment || {})
+ .sort(alphanumSort)
+ }
},
actions: {
fetchAntibodies(request: APIFetchParams): void {
@@ -94,34 +98,6 @@ export const useStore = defineStore('store', {
})
},
- // getAntibodiesSpecies(): void {
- // api.getAntibodiesSpecies().then(response => {
- // this.antibodiesSpecies = Object.freeze(response.data)
- // }).catch((err: AxiosError) => {
- // alert(err.message)
- // console.log(err)
- // })
- // },
-
- // getAntibodiesSources(): void {
- // api.getAntibodiesSources().then(response => {
- // this.antibodiesSources = Object.freeze(response.data)
- // }).catch((err: AxiosError) => {
- // alert(err.message)
- // console.log(err)
- // })
- // },
-
- // getAntibodiesSegments(): void {
- // api.getAntibodiesSegments().then(response => {
- // this.antibodiesHeavySegments = Object.freeze(response.data.heavySegments.sort(alphanumSort))
- // this.antibodiesLightSegments = Object.freeze(response.data.lightSegments.sort(alphanumSort))
- // }).catch((err: AxiosError) => {
- // alert(err.message)
- // console.log(err)
- // })
- // },
-
getStatistics(): void {
api.getStatistics().then(response => {
this.statistics = Object.freeze(response.data)
--
GitLab
From 9c28fb7c5f8ccd4b93fb53f62874fc565c9a976d Mon Sep 17 00:00:00 2001
From: Simon Malesys <simon.malesys@pasteur.fr>
Date: Thu, 6 Feb 2025 16:47:54 +0100
Subject: [PATCH 3/3] Fix typos in stats
---
data/2025-01-21-stats.json | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/data/2025-01-21-stats.json b/data/2025-01-21-stats.json
index 0543fbd..a81ba67 100644
--- a/data/2025-01-21-stats.json
+++ b/data/2025-01-21-stats.json
@@ -50,7 +50,7 @@
"Thera-SAbDab": 754,
"EBOLA": 282
},
- "antibodiesPerHeavySegments": {
+ "antibodiesPerHeavySegment": {
"IGHV3": 679792,
"IGHV4": 296332,
"IGHV7": 10885,
@@ -67,7 +67,7 @@
"IGHV11": 68,
"IGHV15": 14
},
- "antibodiesPerLightSegments": {
+ "antibodiesPerLightSegment": {
"IGLV4": 15025,
"IGLV9": 1703,
"IGLV7": 18156,
--
GitLab