From a5dfd8c17da4b00383f34990e51256bd9a2fa456 Mon Sep 17 00:00:00 2001
From: Rachel  LEGENDRE <rachel.legendre@pasteur.fr>
Date: Wed, 8 Sep 2021 11:52:09 +0200
Subject: [PATCH] Add new file

---
 env.sh | 14 ++++++++++++++
 1 file changed, 14 insertions(+)
 create mode 100644 env.sh

diff --git a/env.sh b/env.sh
new file mode 100644
index 0000000..cae1567
--- /dev/null
+++ b/env.sh
@@ -0,0 +1,14 @@
+#install conda via miniconda :
+follow this tuto : https://docs.conda.io/en/latest/miniconda.html#linux-installers
+
+#create your conda env
+conda create -n snakemake 
+conda activate snakemake
+conda config --add channels defaults
+conda config --add channels bioconda
+conda config --add channels conda-forge
+conda install -c anaconda python
+conda install -c bioconda snakemake 
+conda install -c anaconda pandas
+conda install -c bioconda pysam
+conda install -c conda-forge singularity
-- 
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