Commits · a7cb2a01530cab78e8c13de186e3b1fce4fe249a · hub / ePeak

01 Mar, 2022 1 commit
- connect seacr to IA and chipflowr · a7cb2a01
  Rachel LEGENDRE authored Mar 01, 2022
  
  a7cb2a01
25 Feb, 2022 4 commits
- Dedup bam as input to QC rules - remove pool for Seacr and from IA input · b322e38b
  Rachel LEGENDRE authored Feb 25, 2022
  
  b322e38b
- remove pool file in IA · 108cdca9
  Rachel LEGENDRE authored Feb 25, 2022
  
  108cdca9
- update · 6ec2a972
  Rachel LEGENDRE authored Feb 25, 2022
  
  6ec2a972
- remove useless rules · 799314b7
  Rachel LEGENDRE authored Feb 25, 2022
  
  799314b7
24 Feb, 2022 2 commits
- correction of Q&A about input used during peak calling · ac6cdf4e
  Rachel LEGENDRE authored Feb 24, 2022
  
  ac6cdf4e
- fix error in SPR, add seacr tips · a88a5a04
  Rachel LEGENDRE authored Feb 24, 2022
  
  a88a5a04
23 Feb, 2022 3 commits
- wrong help in config · 1467b8a9
  Rachel LEGENDRE authored Feb 23, 2022
  
  1467b8a9
- wrong help in config · 6b4693dc
  Rachel LEGENDRE authored Feb 23, 2022
  
  6b4693dc
- add seacr - correct some issues · 69eba826
  Rachel LEGENDRE authored Feb 23, 2022
  
  69eba826
18 Feb, 2022 1 commit
- add genomeCov and SEACR rules · 7bcd06cc
  Rachel LEGENDRE authored Feb 18, 2022
  
  7bcd06cc
17 Feb, 2022 1 commit
- add setting pipefail - add RAM to PPR - removing old files previous samtools · 36c48731
  Rachel LEGENDRE authored Feb 17, 2022
  
  36c48731
16 Feb, 2022 4 commits
- agree config file to new rules · abd1b85a
  Rachel LEGENDRE authored Feb 16, 2022
  
  abd1b85a
- agree config file to new rules · 29c873a5
  Rachel LEGENDRE authored Feb 16, 2022
  
  29c873a5
- add choice to deduplicate on IP only · 64fbe7a1
  Rachel LEGENDRE authored Feb 16, 2022
  
  64fbe7a1
- modify section design · f0a74d91
  Rachel LEGENDRE authored Feb 16, 2022
  
  f0a74d91
15 Feb, 2022 5 commits
- prettier code · 8b8791cc
  Rachel LEGENDRE authored Feb 15, 2022
  
  8b8791cc
- add name to plotFingerprint · d84dd70b
  Rachel LEGENDRE authored Feb 15, 2022
  
  d84dd70b
- update test with new genome and new rules · 8f790eb1
  Rachel LEGENDRE authored Feb 15, 2022
  
  8f790eb1
- fix errors in igv_session · 66b7a9b7
  Rachel LEGENDRE authored Feb 15, 2022
  
  66b7a9b7
- add rules - changes directory names · e4bf9ebb
  Rachel LEGENDRE authored Feb 15, 2022
  
  e4bf9ebb
14 Feb, 2022 2 commits
- fix typo errors · 9fc0d6a8
  Rachel LEGENDRE authored Feb 14, 2022
  
  9fc0d6a8
- add more RAM for computeMAtrix · e7318e92
  Rachel LEGENDRE authored Feb 14, 2022
  
  e7318e92
13 Feb, 2022 1 commit
- fix bash error in complexity rule · 6b690267
  Rachel LEGENDRE authored Feb 13, 2022
  
  6b690267
12 Feb, 2022 3 commits
- adding features v1 · 37ee86ce
  Rachel LEGENDRE authored Feb 12, 2022
  
  37ee86ce
- modify design - specify specific INPUT for each IP · 67c0eb09
  Rachel LEGENDRE authored Feb 12, 2022
  
  67c0eb09
- add new rules for more QC · 6d9f4f56
  Rachel LEGENDRE authored Feb 12, 2022
  
  6d9f4f56
07 Feb, 2022 3 commits
- fix issue #1 · 110357ab
  Rachel LEGENDRE authored Feb 07, 2022
  
  110357ab
- remove testing config · b3941470
  Rachel LEGENDRE authored Feb 07, 2022
  
  b3941470
- fix issue #1 · 260da393
  Rachel LEGENDRE authored Feb 07, 2022
  
  260da393
01 Feb, 2022 1 commit
- Update README.md · df3a3b49
  Rachel LEGENDRE authored Feb 01, 2022
  
  df3a3b49
29 Dec, 2021 1 commit
- add ToC · e099affb
  Rachel LEGENDRE authored Dec 29, 2021
  
  e099affb
20 Dec, 2021 1 commit
- typo error · 6a1abac8
  Rachel LEGENDRE authored Dec 20, 2021
  
  6a1abac8
14 Dec, 2021 2 commits
- Update README.md · 76f25a7f
  Rachel LEGENDRE authored Dec 14, 2021
  
  76f25a7f
- Upload New File · acea321a
  Rachel LEGENDRE authored Dec 14, 2021
  
  acea321a
13 Dec, 2021 5 commits
- Update README.md · 0b9bd789
  Maëlle Daunesse authored Dec 13, 2021
  
  0b9bd789
- Update README.md · c6d19797
  Maëlle Daunesse authored Dec 13, 2021
  
  c6d19797
- Update README.md · 62fecac6
  Maëlle Daunesse authored Dec 13, 2021
  
  62fecac6
- Update of README - working session MD + RL · 9cd1a813
  Rachel LEGENDRE authored Dec 13, 2021
  
  9cd1a813
- Update config.yaml · 141c0d30
  Rachel LEGENDRE authored Dec 13, 2021
  
  141c0d30