From 59b1164ae96bf3d7cc20d1e43ae7db8b307d5b6f Mon Sep 17 00:00:00 2001
From: Rachel LEGENDRE <rachel.legendre@pasteur.fr>
Date: Fri, 9 Dec 2022 13:03:36 +0100
Subject: [PATCH] Update config.yaml
---
config/config.yaml | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/config/config.yaml b/config/config.yaml
index 5a41caa..cc16830 100644
--- a/config/config.yaml
+++ b/config/config.yaml
@@ -147,7 +147,7 @@ bowtie2_mapping:
star_mapping:
do: yes
- options: "--outFilterMismatchNoverLmax 0.05 --outSAMunmapped Within "
+ options: "--outFilterMismatchNoverLmax 0.05"
pass2: "all-samples"
threads: 4
--
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