diff --git a/README.md b/README.md
index 59477b0b18672bdb1ed2e5ef1fe6c9dbd37e3272..52ae86cfae6c09fbea128554b8a83eb061dec200 100644
--- a/README.md
+++ b/README.md
@@ -29,10 +29,13 @@ In addition to above tools, you need to install pipeline-related tools:
 - cutadapt
 - alienTrimmer
 - fastqc
+- sortmeRNA
 - samtools
 - bowtie2
 - bedtools
 - star 
+- minimap2
+- kallisto
 - deeptools
 - multiqc