From 94f59bf85e5aa389e2631862ed4a375bbddce872 Mon Sep 17 00:00:00 2001
From: Rachel LEGENDRE <rachel.legendre@pasteur.fr>
Date: Mon, 29 Jan 2024 10:02:35 +0100
Subject: [PATCH] Update sortmerna.rules
---
workflow/rules/sortmerna.rules | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/workflow/rules/sortmerna.rules b/workflow/rules/sortmerna.rules
index 3e384c6..b7f5d5d 100755
--- a/workflow/rules/sortmerna.rules
+++ b/workflow/rules/sortmerna.rules
@@ -60,7 +60,7 @@ rule sortmerna:
#get file extension
if [[ ${{infiles[0]}} =~ \.gz$ ]]
then
- ext="gz"
+ ext=".gz"
else
ext=""
fi
--
GitLab