From f38a8258f0e60a2c12d44b6c3fa9ebfca62dff5d Mon Sep 17 00:00:00 2001
From: Rachel  LEGENDRE <rachel.legendre@pasteur.fr>
Date: Wed, 5 Jan 2022 15:21:27 +0100
Subject: [PATCH] Update config.yaml

---
 config/config.yaml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/config/config.yaml b/config/config.yaml
index 06d7a33..68a81ff 100644
--- a/config/config.yaml
+++ b/config/config.yaml
@@ -34,7 +34,7 @@ input_extension: '.fastq.gz'
 # directory where you want (not yet fonctional sorry)
 analysis_dir: .
 # tmpdir: write tempory file on this directory (default /tmp/, but could be "/pasteur/sonic/scratch/users/LOGIN/")
-tmpdir: "/pasteur/sonic/scratch/public/"
+tmpdir: $MYSCRATCH
 
 
 #===============================================================================
-- 
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