Commits · master · hub / RNAflow

16 Jan, 2023 1 commit
- change multiqc working directory · b4c898d8
  Rachel LEGENDRE authored Jan 16, 2023
  
  b4c898d8
30 Dec, 2022 14 commits
- change igv directory · 1983c1e6
  Rachel LEGENDRE authored Dec 30, 2022
  
  1983c1e6
- change igv directory · 1b582d96
  Rachel LEGENDRE authored Dec 30, 2022
  
  1b582d96
- update readme · 349e29df
  Rachel LEGENDRE authored Dec 30, 2022
  
  349e29df
- update readme · 7a3fa10b
  Rachel LEGENDRE authored Dec 30, 2022
  
  7a3fa10b
- update readme · b5af1939
  Rachel LEGENDRE authored Dec 30, 2022
  
  b5af1939
- update readme · 73d8eded
  Rachel LEGENDRE authored Dec 30, 2022
  
  73d8eded
- rename adapters options · 1b4bdf84
  Rachel LEGENDRE authored Dec 30, 2022
  
  1b4bdf84
- add some comment in readme - new release comment · 5482e034
  Rachel LEGENDRE authored Dec 30, 2022
  
  5482e034
- fix #40 #36 · 02cfc51a
  Rachel LEGENDRE authored Dec 30, 2022
  
  02cfc51a
- Add some use cases · ab1a4cf6
  Rachel LEGENDRE authored Dec 30, 2022
  
  ab1a4cf6
- fix some code issues · 82f61996
  Rachel LEGENDRE authored Dec 30, 2022
  
  82f61996
- add salmon for counting - #36 · f99e0f4e
  Rachel LEGENDRE authored Dec 30, 2022
  
  f99e0f4e
- add IGV_session · e397272a
  Rachel LEGENDRE authored Dec 30, 2022
  
  e397272a
- add fastq-screen - fix · 364faf38
  Rachel LEGENDRE authored Dec 30, 2022
  
  364faf38
09 Dec, 2022 1 commit
- Update config.yaml · 59b1164a
  Rachel LEGENDRE authored Dec 09, 2022
  
  59b1164a
18 May, 2022 1 commit
- Update README.md · 26fdf970
  Rachel LEGENDRE authored May 18, 2022
  
  26fdf970
30 Mar, 2022 2 commits
- Update README.md · d24711e5
  Rachel LEGENDRE authored Mar 30, 2022
  
  d24711e5
- add rulegraph · cddcc0e5
  Rachel LEGENDRE authored Mar 30, 2022
  
  cddcc0e5
25 Mar, 2022 1 commit
- remove output to multiqc for rules with temp output · 3423af7f
  Rachel LEGENDRE authored Mar 25, 2022
  
  3423af7f
11 Feb, 2022 2 commits
- update contributors · f4243df7
  Rachel LEGENDRE authored Feb 11, 2022
  
  f4243df7
- add contributors · b28122d2
  Rachel LEGENDRE authored Feb 11, 2022
  
  b28122d2
10 Feb, 2022 2 commits
- remove glob to find fastq · ace8d352
  Rachel LEGENDRE authored Feb 10, 2022
  
  ace8d352
- Update Snakefile · ce84c726
  Rachel LEGENDRE authored Feb 10, 2022
  
  ce84c726
09 Feb, 2022 3 commits
- using glob instead of os.listdir · dc3938fc
  Rachel LEGENDRE authored Feb 09, 2022
  
  dc3938fc
- Update config.yaml · 43daea49
  Rachel LEGENDRE authored Feb 09, 2022
  
  43daea49
- Update Snakefile · 0a3aac85
  Rachel LEGENDRE authored Feb 09, 2022
  
  0a3aac85
03 Feb, 2022 3 commits
- Update runme.sh · 6a48dd58
  Rachel LEGENDRE authored Feb 03, 2022
  
  6a48dd58
- Merge branch 'vibaille-master-patch-14605' into 'master' · 44085748
  Rachel LEGENDRE authored Feb 03, 2022
```
add mark duplicates

See merge request !31
```
  44085748
- add mark duplicates · c165a791
  Victoire BAILLET authored Feb 03, 2022
  
  c165a791
14 Jan, 2022 3 commits
- Update MarkDuplicates default values · 86ea1bd6
  Rachel LEGENDRE authored Jan 14, 2022
  
  86ea1bd6
- add markDuplicate in workflow #37 · 57189cc5
  Rachel LEGENDRE authored Jan 14, 2022
  
  57189cc5
- add markDuplicate in workflow · 3944616b
  Rachel LEGENDRE authored Jan 14, 2022
  
  3944616b
13 Jan, 2022 1 commit
- change defaults + tmp dir after maestro update · 9af8df89
  Rachel LEGENDRE authored Jan 13, 2022
  
  9af8df89
05 Jan, 2022 1 commit
- Update config.yaml · f38a8258
  Rachel LEGENDRE authored Jan 05, 2022
  
  f38a8258
29 Dec, 2021 2 commits
- Update TruSeq_Stranded_RNA.fa · 852ebeed
  Rachel LEGENDRE authored Dec 29, 2021
  
  852ebeed
- add some primers · 6ddd486a
  Rachel LEGENDRE authored Dec 29, 2021
  
  6ddd486a
22 Dec, 2021 2 commits
- get good log output for multiQC · 87d0a723
  Rachel LEGENDRE authored Dec 22, 2021
  
  87d0a723
- fix IndexError when SE data · 5c425553
  Rachel LEGENDRE authored Dec 22, 2021
  
  5c425553
20 Dec, 2021 1 commit
- Merge branch 'master' of gitlab.pasteur.fr:hub/rnaflow · 4c095324
  Rachel LEGENDRE authored Dec 20, 2021
  
  4c095324