Commit 63cd7df6 authored by Hervé  MENAGER's avatar Hervé MENAGER
Browse files

use "-s" from docker_extract to build singularity images

parent 707d6747
......@@ -10,7 +10,7 @@ source ${toil_venv}/bin/activate
export SINGULARITY_PULLFOLDER=${singularity_imgs_path}
# Prefetch every docker images and built them for singularity
docker_extract.py ${singularity_imgs_path} $1
docker_extract.py -s ${singularity_imgs_path} $1
# Run toil
# export TOIL_SLURM_ARGS="" # Need to be set by parameters later
......
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