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tars-cwl-runner
Commits
63cd7df6
Commit
63cd7df6
authored
May 29, 2019
by
Hervé MENAGER
Browse files
use "-s" from docker_extract to build singularity images
parent
707d6747
Changes
1
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tars-cwl-runner.sh
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63cd7df6
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@@ -10,7 +10,7 @@ source ${toil_venv}/bin/activate
export
SINGULARITY_PULLFOLDER
=
${
singularity_imgs_path
}
# Prefetch every docker images and built them for singularity
docker_extract.py
${
singularity_imgs_path
}
$1
docker_extract.py
-s
${
singularity_imgs_path
}
$1
# Run toil
# export TOIL_SLURM_ARGS="" # Need to be set by parameters later
...
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