From 05c66f66333ded31c59f1f1dc69ded0e10fdbdef Mon Sep 17 00:00:00 2001
From: Son Phan <msphan@outlook.com>
Date: Sun, 30 Mar 2025 18:45:32 +0200
Subject: [PATCH] update readmes
---
Part1Unet/README.md | 5 +++++
Part2Cellpose/README.md | 12 ++++++++++++
2 files changed, 17 insertions(+)
diff --git a/Part1Unet/README.md b/Part1Unet/README.md
index ad306dd..0be206b 100644
--- a/Part1Unet/README.md
+++ b/Part1Unet/README.md
@@ -9,4 +9,9 @@ setenv LD_LIBRARY_PATH "${CONDA_PREFIX}/lib:${LD_LIBRARY_PATH}"
jupyter notebook
```
+If the conda env `qlife25-unet` is not found. Install it using `unet_env.yml` file
+```
+setconda
+conda env create -f unet_env.yml
+```
\ No newline at end of file
diff --git a/Part2Cellpose/README.md b/Part2Cellpose/README.md
index 7628f66..6189fa1 100644
--- a/Part2Cellpose/README.md
+++ b/Part2Cellpose/README.md
@@ -6,4 +6,16 @@ To run the notebook:
setconda
conda activate /users/bioensei/mphan/.conda/envs/qlife25-cellpose
jupyter notebook
+```
+
+If the conda env `qlife25-cellpose` is not found. Install it by following commands
+
+```
+setconda
+conda create -n qlife25-cellpose python=3.10 -y
+conda activate qlife-cellpose
+conda install pytorch=1.12.0 cudatoolkit=11.3 -c pytorch
+pip uninstall torch
+pip install 'cellpose[gui]'
+pip install notebook==6.1.5 scikit-image matplotlib
```
\ No newline at end of file
--
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