diff --git a/GUI/DeProj_GUI.mlapp b/src/GUI/DeProj_GUI.mlapp
similarity index 100%
rename from GUI/DeProj_GUI.mlapp
rename to src/GUI/DeProj_GUI.mlapp
diff --git a/MainScripts/InputSegmentation.m b/src/InputSegmentation.m
similarity index 100%
rename from MainScripts/InputSegmentation.m
rename to src/InputSegmentation.m
diff --git a/MainScripts/displayCombinedMap.m b/src/displayCombinedMap.m
similarity index 100%
rename from MainScripts/displayCombinedMap.m
rename to src/displayCombinedMap.m
diff --git a/MainScripts/displaySubplotCellContour.m b/src/displaySubplotCellContour.m
similarity index 100%
rename from MainScripts/displaySubplotCellContour.m
rename to src/displaySubplotCellContour.m
diff --git a/MainScripts/findContour.m b/src/findContour.m
similarity index 100%
rename from MainScripts/findContour.m
rename to src/findContour.m
diff --git a/MainScripts/formatTableOuputSurfaceCombine.m b/src/formatTableOuputSurfaceCombine.m
similarity index 100%
rename from MainScripts/formatTableOuputSurfaceCombine.m
rename to src/formatTableOuputSurfaceCombine.m
diff --git a/MainScripts/license_uipickfiles.txt b/src/license_uipickfiles.txt
similarity index 100%
rename from MainScripts/license_uipickfiles.txt
rename to src/license_uipickfiles.txt
diff --git a/MainScripts/mask_to_objects.m b/src/mask_to_objects.m
similarity index 100%
rename from MainScripts/mask_to_objects.m
rename to src/mask_to_objects.m
diff --git a/MainScripts/surface3D_combine.m b/src/surface3D_combine.m
similarity index 100%
rename from MainScripts/surface3D_combine.m
rename to src/surface3D_combine.m
diff --git a/MainScripts/uipickfiles.m b/src/uipickfiles.m
similarity index 100%
rename from MainScripts/uipickfiles.m
rename to src/uipickfiles.m