- 16 Jul, 2020 3 commits
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Jean-Yves TINEVEZ authored
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Jean-Yves TINEVEZ authored
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Jean-Yves TINEVEZ authored
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- 15 Jul, 2020 2 commits
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Jean-Yves TINEVEZ authored
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Jean-Yves TINEVEZ authored
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- 13 Jul, 2020 1 commit
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Jean-Yves TINEVEZ authored
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- 07 Jul, 2020 4 commits
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Jean-Yves TINEVEZ authored
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Jean-Yves TINEVEZ authored
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Jean-Yves TINEVEZ authored
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Jean-Yves TINEVEZ authored
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- 06 Jul, 2020 9 commits
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Jean-Yves TINEVEZ authored
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Jean-Yves TINEVEZ authored
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Jean-Yves TINEVEZ authored
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Jean-Yves TINEVEZ authored
We want to run the fit on the non-centered points to yield the center of the ellipse in the returned array.
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Jean-Yves TINEVEZ authored
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Jean-Yves TINEVEZ authored
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Jean-Yves TINEVEZ authored
This class mainly manages a collection of epicells, has static methods for its creation from images, and has some methods for plotting things.
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Jean-Yves TINEVEZ authored
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Jean-Yves TINEVEZ authored
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- 04 Jul, 2020 8 commits
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Jean-Yves TINEVEZ authored
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Jean-Yves TINEVEZ authored
The transform back is not correct yet. See how to make the fit and rotation with respect to point centers, then translate ellipse back at the right coordinates.
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Jean-Yves TINEVEZ authored
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Jean-Yves TINEVEZ authored
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Jean-Yves TINEVEZ authored
Subfunction that does only fit on 2d points (no matrix rotation). Fixed the quadratic to cartesian conversion.
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Jean-Yves TINEVEZ authored
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Jean-Yves TINEVEZ authored
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Jean-Yves TINEVEZ authored
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- 03 Jul, 2020 4 commits
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Jean-Yves TINEVEZ authored
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Jean-Yves TINEVEZ authored
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Jean-Yves TINEVEZ authored
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Jean-Yves TINEVEZ authored
and back.
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- 02 Jul, 2020 1 commit
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Jean-Yves TINEVEZ authored
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- 30 Jun, 2020 8 commits
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Jean-Yves TINEVEZ authored
Like S. Herbert did.
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Jean-Yves TINEVEZ authored
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Jean-Yves TINEVEZ authored
Now we work more like a class with methods.
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Jean-Yves TINEVEZ authored
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Jean-Yves TINEVEZ authored
Small enough to be committed. Images by Leo Valon, Institut Pasteur, Levayer lab.
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Jean-Yves TINEVEZ authored
- We smooth the height-map by a scale automatically determined by object scales -> avoid jagged edges. - We prune effectively regions where Z = 0. - Compute and display de-project area.
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Jean-Yves TINEVEZ authored
- Directly permute X & Y to have boundary coordinates in the proper referential, like junctions. - Reduce the number of vertices in the polygon, using reducepoly. With this setting (0.005) reducepoly is very conservative, but effectively decimate useless vertices. This has a positive impact on the area calculation (fewer, larger triangles), and on all performance.
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Jean-Yves TINEVEZ authored
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