Commits · 890257dc02a28308f50952261cc91366da898f98 · IAH public / DeProj

22 Jul, 2020 8 commits
- Tweak text. · 890257dc
  Jean-Yves TINEVEZ authored Jul 22, 2020
  
  890257dc
- Commit forgotten image. · d2f4a0aa
  Jean-Yves TINEVEZ authored Jul 22, 2020
  
  d2f4a0aa
- Fix link to images. · 090209c4
  Jean-Yves TINEVEZ authored Jul 22, 2020
  
  090209c4
- Complete method documentation. · 60b97ad4
  Jean-Yves TINEVEZ authored Jul 22, 2020
  
  60b97ad4
- Clip text out of plot borders when plotting the cell ids. · 3bc1d658
  Jean-Yves TINEVEZ authored Jul 22, 2020
  
  3bc1d658
- Fix typo. · 8c785d03
  Jean-Yves TINEVEZ authored Jul 22, 2020
  
  8c785d03
- Document deproj.from_heightmap · 04ea4d2e
  Jean-Yves TINEVEZ authored Jul 22, 2020
```
I simply copied the part from the README.md.
```
  04ea4d2e
- Fix typo. · 90ae4819
  Jean-Yves TINEVEZ authored Jul 22, 2020
  
  90ae4819
21 Jul, 2020 5 commits
- WIP: document deproj class methods. · b4ebc427
  Jean-Yves TINEVEZ authored Jul 21, 2020
  
  b4ebc427
- Rename DeProjMetrics.md in DeProjProperties.md. · 18a689b7
  Jean-Yves TINEVEZ authored Jul 21, 2020
  
  18a689b7
- WIP: Document epicell methods. · 0afb5c47
  Jean-Yves TINEVEZ authored Jul 21, 2020
  
  0afb5c47
- Fix typos. · a1eded6a
  Jean-Yves TINEVEZ authored Jul 21, 2020
  
  a1eded6a
- Fix bug in add_plot_id. · 1fd2c211
  Jean-Yves TINEVEZ authored Jul 21, 2020
```
The text function requires the coordinates to be doubles.
```
  1fd2c211
20 Jul, 2020 2 commits
- Finish documenting deproj and epicell properties. · 3a088996
  Jean-Yves TINEVEZ authored Jul 20, 2020
  
  3a088996
- WIP: deproj properties. · 87422dcc
  Jean-Yves TINEVEZ authored Jul 20, 2020
  
  87422dcc
19 Jul, 2020 1 commit
- Document all the epicell class properties. · 421d0f2d
  Jean-Yves TINEVEZ authored Jul 19, 2020
  
  421d0f2d
18 Jul, 2020 2 commits
- WIP: Document class properties and methods. · bdb68f94
  Jean-Yves TINEVEZ authored Jul 18, 2020
  
  bdb68f94
- Fix typo. · 808cf310
  Jean-Yves TINEVEZ authored Jul 18, 2020
  
  808cf310
17 Jul, 2020 5 commits
- Fix link to images in doc. · 5fa34a1c
  Jean-Yves TINEVEZ authored Jul 17, 2020
  
  5fa34a1c
- More documentation. · abd89172
  Jean-Yves TINEVEZ authored Jul 17, 2020
  
  abd89172
- Method to export results to csv or xslx. · d1f1d1be
  Jean-Yves TINEVEZ authored Jul 17, 2020
  
  d1f1d1be
- Use unicode ² symbol for square symbol in units. · 4430811e
  Jean-Yves TINEVEZ authored Jul 17, 2020
  
  4430811e
- Also export the curvatures to the table. · 7f3076b9
  Jean-Yves TINEVEZ authored Jul 17, 2020
  
  7f3076b9
16 Jul, 2020 6 commits
- Flesh out the documentation. · 130a4d7e
  Jean-Yves TINEVEZ authored Jul 16, 2020
  
  130a4d7e
- Update the example. · 3b5baeb2
  Jean-Yves TINEVEZ authored Jul 16, 2020
  
  3b5baeb2
- Methods to plot the distorsion caused by the projection. · ea294214
  Jean-Yves TINEVEZ authored Jul 16, 2020
  
  ea294214
- Fix typo. · 3e0f256f
  Jean-Yves TINEVEZ authored Jul 16, 2020
  
  3e0f256f
- Add methods to plot cell area and perimeter. · a8e0a7eb
  Jean-Yves TINEVEZ authored Jul 16, 2020
  
  a8e0a7eb
- Externalize curvature calculation and put the right units. · 5d9ae4db
  Jean-Yves TINEVEZ authored Jul 16, 2020
  
  5d9ae4db
15 Jul, 2020 2 commits
- Plot tissue local curvature with a nice colormap. · d0cd038e
  Jean-Yves TINEVEZ authored Jul 15, 2020
  
  d0cd038e
- Compute and store tissue local curvatures. · f915ca9a
  Jean-Yves TINEVEZ authored Jul 15, 2020
  
  f915ca9a
13 Jul, 2020 1 commit
- WIP: Flesh out README.md. · fd655299
  Jean-Yves TINEVEZ authored Jul 13, 2020
  
  fd655299
07 Jul, 2020 4 commits
- Method to export a deproj object to a table. · b2b976c5
  Jean-Yves TINEVEZ authored Jul 07, 2020
  
  b2b976c5
- Set the colorbar properly on the ellipse fit figure. · e6bcc04b
  Jean-Yves TINEVEZ authored Jul 07, 2020
  
  e6bcc04b
- Integrate routine to plot ellipses in @deproj class. · 06b7ea29
  Jean-Yves TINEVEZ authored Jul 07, 2020
  
  06b7ea29
- Rework the ellipse plotting routines. · 9d5a498d
  Jean-Yves TINEVEZ authored Jul 07, 2020
  
  9d5a498d
06 Jul, 2020 4 commits
- Compute projected angle of main orientation. · 9e532f94
  Jean-Yves TINEVEZ authored Jul 06, 2020
  
  9e532f94
- Add eccentricity descriptor. · 97b42aa9
  Jean-Yves TINEVEZ authored Jul 06, 2020
  
  97b42aa9
- When plotting the fit of ellipses, also plot direction of elongation. · 18734fcf
  Jean-Yves TINEVEZ authored Jul 06, 2020
  
  18734fcf
- Fix the 3D ellipse fit call. · 6b2f62ce
  Jean-Yves TINEVEZ authored Jul 06, 2020
```
We want to run the fit on the non-centered points to yield the center
of the ellipse in the returned array.
```
  6b2f62ce