From 26365a0c35bf65b29738c4e644d75ca8ee54427d Mon Sep 17 00:00:00 2001
From: ctrebeau <ctrebeau@pasteur.fr>
Date: Tue, 19 Oct 2021 11:52:29 +0200
Subject: [PATCH] refactor - change parameters' label names
---
.../ida/zellige/command/ZelligeCommand.java | 24 +++++++++----------
1 file changed, 12 insertions(+), 12 deletions(-)
diff --git a/src/main/java/fr/pasteur/ida/zellige/command/ZelligeCommand.java b/src/main/java/fr/pasteur/ida/zellige/command/ZelligeCommand.java
index 3c86246e..39f49929 100644
--- a/src/main/java/fr/pasteur/ida/zellige/command/ZelligeCommand.java
+++ b/src/main/java/fr/pasteur/ida/zellige/command/ZelligeCommand.java
@@ -47,40 +47,40 @@ public class ZelligeCommand< T extends RealType< T > & NativeType< T > > extends
@Parameter( label = "Otsu threshold", min = "0", max = "2", stepSize = "0.1" )
private double otsu = 0.1;
- @Parameter( label = "XY dilatation", min = "0", max = "10" )
+ @Parameter( label = "XY blur radius", min = "0", max = "10" )
private int sigmaXY = 1;
- @Parameter( label = "Z dilatation", min = "0", max = "10" )
+ @Parameter( label = "Z blur radius", min = "0", max = "10" )
private int sigmaZ = 1;
- @Parameter( label = "Island size", min = "0", max = "50", stepSize = "5" )
+ @Parameter( label = "Min Island size", min = "0", max = "50", stepSize = "5" )
private int islandSize = 5;
- @Parameter( label = "Island neighbourhood", min = "4", max = "8", stepSize = "4" )
+ @Parameter( label = "Island connectivity", min = "4", max = "8", stepSize = "4" )
private int connexity = 4;
- @Parameter( label = "First round Starting OSE size", min = "0", max = "1", stepSize = "0.1" )
+ @Parameter( label = "1st round Starting OSE size", min = "0", max = "1", stepSize = "0.1" )
private double startingOsSize1 = 0.8;
- @Parameter( label = "First round overlap", min = "0", max = "50" )
+ @Parameter( label = "1st round overlap ", min = "0", max = "50" )
private int overlap1 = 10;
- @Parameter( label = "First round matching rate", min = "0.5", max = "1", stepSize = "0.05" )
+ @Parameter( label = "1st round matching rate", min = "0.5", max = "1", stepSize = "0.05" )
private double connexityRate1 = 0.8;
- @Parameter( label = "Second round Starting OSE size", min = "0", max = "1", stepSize = "0.1" )
+ @Parameter( label = "2nd round Starting OSE size", min = "0", max = "1", stepSize = "0.1" )
private double startingOsSize2 = 0.1;
- @Parameter( label = "Second round overlap", min = "0", max = "50", stepSize = "5" )
+ @Parameter( label = "2nd round overlap", min = "0", max = "50", stepSize = "5" )
private int overlap2 = 10;
- @Parameter( label = "Second round matching rate", min = "0.5", max = "1", stepSize = "0.05" )
+ @Parameter( label = "2nd round matching rate", min = "0.5", max = "1", stepSize = "0.05" )
private double connexityRate2 = 0.9;
- @Parameter( min = "0.05", max = "1" )
+ @Parameter( label = "Min surface size (rel to XY image size)", min = "0.05", max = "1", stepSize = "0.1" )
private double surfaceMinSizeFactor;
- @Parameter( min = "0" )
+ @Parameter( label = "Projection width (deltaZ)", min = "0" )
private int delta;
--
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