From 0da2308291320cc92e64da5ed65386c7fc5cb6e9 Mon Sep 17 00:00:00 2001
From: Bryan Brancotte <bryan.brancotte@pasteur.fr>
Date: Fri, 18 Apr 2025 17:47:20 +0200
Subject: [PATCH] handle when enzyme become empty
---
src/InSillyCloWeb/assemblies/models.py | 8 +++++++-
1 file changed, 7 insertions(+), 1 deletion(-)
diff --git a/src/InSillyCloWeb/assemblies/models.py b/src/InSillyCloWeb/assemblies/models.py
index 799c5b4..f0c6f97 100644
--- a/src/InSillyCloWeb/assemblies/models.py
+++ b/src/InSillyCloWeb/assemblies/models.py
@@ -343,6 +343,12 @@ class SimulatorJob(models.Model):
return ''
# Restriction enzyme
+ @property
+ def enzyme_names(self) -> List[str]:
+ if not self.restriction_enzyme_gel:
+ return []
+ return self.restriction_enzyme_gel.splitlines()
+
@cached_property
def enzyme_image_url(self) -> str:
file = self.results_dir / 'digestion.png'
@@ -407,7 +413,7 @@ class SimulatorJob(models.Model):
data_source=insillyclo.data_source.DataSourceHardCodedImplementation(),
primers_file=primers_file,
primer_id_pairs=list(self.pcr_pairs) if primers_file else None,
- enzyme_names=[self.restriction_enzyme_gel],
+ enzyme_names=self.enzyme_names,
)
@property
--
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