From 90f270c82390e368b6676b1b70b62ff1cb6d603b Mon Sep 17 00:00:00 2001
From: Julien FumeyY <julien.fumey@pasteur.fr>
Date: Thu, 24 Apr 2025 12:01:27 +0200
Subject: [PATCH] add listview for simulatorjob
---
src/InSillyCloWeb/assemblies/models.py | 32 ++++++-----
.../assemblies/simulatorjob_card.html | 53 +++++++++++++++++++
.../assemblies/simulatorjob_list.html | 20 +++++++
src/InSillyCloWeb/assemblies/urls.py | 1 +
src/InSillyCloWeb/assemblies/views.py | 17 ++++++
5 files changed, 109 insertions(+), 14 deletions(-)
create mode 100644 src/InSillyCloWeb/assemblies/templates/assemblies/simulatorjob_card.html
create mode 100644 src/InSillyCloWeb/assemblies/templates/assemblies/simulatorjob_list.html
diff --git a/src/InSillyCloWeb/assemblies/models.py b/src/InSillyCloWeb/assemblies/models.py
index b9a8003..785a029 100644
--- a/src/InSillyCloWeb/assemblies/models.py
+++ b/src/InSillyCloWeb/assemblies/models.py
@@ -288,6 +288,20 @@ class SimulatorJob(models.Model):
null=True,
blank=True,
)
+ owner = models.ForeignKey(
+ User,
+ on_delete=models.CASCADE,
+ related_name='jobs',
+ null=True,
+ blank=True,
+ )
+ owning_session = models.ForeignKey(
+ Session,
+ on_delete=models.CASCADE,
+ related_name='jobs',
+ null=True,
+ blank=True,
+ )
status = models.IntegerField(choices=JobStatus.choices, default=JobStatus.NEW)
created_at = models.DateTimeField(auto_now_add=True)
updated_at = models.DateTimeField(auto_now=True)
@@ -321,20 +335,6 @@ class SimulatorJob(models.Model):
verbose_name="Restriction enzyme",
help_text="Enzyme used to produce digestion gel",
)
- owner = models.ForeignKey(
- User,
- on_delete=models.CASCADE,
- related_name='jobs',
- null=True,
- blank=True,
- )
- owning_session = models.ForeignKey(
- Session,
- on_delete=models.CASCADE,
- related_name='jobs',
- null=True,
- blank=True,
- )
#########################################################################
# Function and methods
@@ -442,6 +442,10 @@ class SimulatorJob(models.Model):
messages.error(request, utils.clear_sensitive_info(str(e), self))
return output
+ @property
+ def output_name(self):
+ pass
+
@property
def db_ip_files(self):
return [self.dbip_dir / file for file in os.listdir(self.dbip_dir)]
diff --git a/src/InSillyCloWeb/assemblies/templates/assemblies/simulatorjob_card.html b/src/InSillyCloWeb/assemblies/templates/assemblies/simulatorjob_card.html
new file mode 100644
index 0000000..3a10920
--- /dev/null
+++ b/src/InSillyCloWeb/assemblies/templates/assemblies/simulatorjob_card.html
@@ -0,0 +1,53 @@
+{% load assemblies_tags %}
+{% load i18n %}
+
+<div class="card context-simulator">
+ <div class="card-body row">
+ <a class="col-12 col-xl-2 col-lg-3 col-md-3 me-md-4 text-decoration-none" href="{% url 'assemblies:simulator-detail' uuid=object.uuid %}">
+ <div class="fw-bolder">
+ Job #{{object.uuid_short}}
+ </div>
+ <small class="text-secondary">
+ {{object|field_verbose_name:'updated_at'}}{%trans ':'%}<br/>
+ {{object.updated_at}}
+ </small>
+ </a>
+ <div class="col border-10 border-start border-primary ps-md-4">
+
+ <div class="d-block">
+ <span class="fw-bolder">
+ {{object|field_verbose_name_and_help_text:'restriction_enzyme_gel'}}
+ {%trans ':'%}
+ </span>
+ {{object.restriction_enzyme_gel}}
+ </div>
+
+
+ <div class="d-block">
+ <span class="fw-bolder">
+ {{object|field_verbose_name_and_help_text:'pcr_pairs_str'}}
+ {%trans ':'%}
+ </span>
+ {{object.pcr_pairs_str}}
+ </div>
+
+ <div class="d-block mt-1">
+ <span class="fw-bolder">
+ {% trans "Plasmids"%}
+ {%for ip in object.input_parts.all %}
+ <div class="d-inline-flex px-3 py-0 mb-1 border border-{{ip.is_mandatory|yesno:'3,1'}}
+ rounded-5 border-designer"
+ >{{ip}}</div>
+ {%endfor%}
+ </div>
+ </div>
+
+ <div class="col-auto">
+ <a href=""
+ class="btn btn-designer btn-md">
+ <i class="bi bi-cloud-arrow-down fs-3"></i>
+ </a>
+ </div>
+
+ </div>
+</div>
diff --git a/src/InSillyCloWeb/assemblies/templates/assemblies/simulatorjob_list.html b/src/InSillyCloWeb/assemblies/templates/assemblies/simulatorjob_list.html
new file mode 100644
index 0000000..eef42dc
--- /dev/null
+++ b/src/InSillyCloWeb/assemblies/templates/assemblies/simulatorjob_list.html
@@ -0,0 +1,20 @@
+{% extends "assemblies/base.html" %}
+{% load crispy_forms_tags %}
+{% load i18n %}
+{% load djangoscss %}
+{% load assemblies_tags %}
+{% load include_markdown %}
+{% load sstatic %}
+
+{% block title %}{{object_list|class_verbose_name_plural}}{% endblock %}
+{% block page_title %}{{object_list|class_verbose_name_plural}}{% endblock %}
+
+{% block content %}
+{% for object in object_list %}
+ <div class="col-12 mb-4">
+ {% include 'assemblies/simulatorjob_card.html' with object=object%}
+ </div>
+{% empty %}
+<div class="alert alert-warning">{% trans "No simulator job found" %}</div>
+{%endfor%}
+{%endblock content %}
\ No newline at end of file
diff --git a/src/InSillyCloWeb/assemblies/urls.py b/src/InSillyCloWeb/assemblies/urls.py
index 8ef6778..ba9d99e 100644
--- a/src/InSillyCloWeb/assemblies/urls.py
+++ b/src/InSillyCloWeb/assemblies/urls.py
@@ -65,6 +65,7 @@ urlpatterns = [
path('', views.index, name='assembly-simulator'),
path('assembly/', views.AssemblyListView.as_view(), name='assembly-list'),
path('assembly/<int:pk>/', views.AssemblyDetailView.as_view(), name='assembly-detail'),
+ path('assembly-simulator/', views.JobSimulatorListView.as_view(), name='simulator-list'),
path('assembly-simulator/create/<str:step>/', simulator_wizard, name='simulator-create-step'),
path('assembly-simulator/create/', simulator_wizard, name='simulator-create'),
path('assembly-simulator/<slug:uuid>/', views.JobSimulatorResult.as_view(), name='simulator-detail'),
diff --git a/src/InSillyCloWeb/assemblies/views.py b/src/InSillyCloWeb/assemblies/views.py
index 0793b9f..32602e1 100644
--- a/src/InSillyCloWeb/assemblies/views.py
+++ b/src/InSillyCloWeb/assemblies/views.py
@@ -11,6 +11,7 @@ from django.urls import reverse_lazy
from django.utils.translation import gettext_lazy as _
from django.views.generic import ListView, DetailView, View, DeleteView, UpdateView
from django.views.generic.detail import SingleObjectMixin
+from django.contrib.sessions.models import Session
from . import mixins
from assemblies import forms, models, utils
@@ -112,6 +113,22 @@ class AssemblyDeleteView(
return super().form_valid(form)
+class JobSimulatorListView(ListView):
+ model = models.SimulatorJob
+
+ def get_queryset(self):
+ qs = super().get_queryset()
+
+ if not any([self.request.user.is_authenticated, self.request.session.session_key]):
+ return qs.none()
+
+ if self.request.user.is_authenticated:
+ qs = qs.filter(owner=self.request.user)
+ elif self.request.session.session_key:
+ qs = qs.filter(owning_session=Session.objects.get(session_key=self.request.session.session_key))
+ return qs
+
+
class JobSimulatorResult(DetailView):
model = models.SimulatorJob
slug_field = 'uuid'
--
GitLab