From c49920350e49881bd498bcc1cd43517a6714f21b Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Herv=C3=A9=20=20MENAGER?= <herve.menager@pasteur.fr>
Date: Mon, 13 Nov 2017 16:20:32 +0100
Subject: [PATCH] compound name in publication is not prefixed anymore with
biblio ID
Former-commit-id: 0b97bbabb8660f34c41d68b6ed31402e89bc70bc
---
ippisite/db.sqlite3.REMOVED.git-id | 2 +-
ippisite/ippidb/management/commands/import_v1_data.py | 2 +-
2 files changed, 2 insertions(+), 2 deletions(-)
diff --git a/ippisite/db.sqlite3.REMOVED.git-id b/ippisite/db.sqlite3.REMOVED.git-id
index 76a79621..e31aa9c9 100644
--- a/ippisite/db.sqlite3.REMOVED.git-id
+++ b/ippisite/db.sqlite3.REMOVED.git-id
@@ -1 +1 @@
-996a2c5897e7d16bd61e296b0099825e1e96e664
\ No newline at end of file
+521ff1feba549fd94abfbcedbfea449190f6f3b2
\ No newline at end of file
diff --git a/ippisite/ippidb/management/commands/import_v1_data.py b/ippisite/ippidb/management/commands/import_v1_data.py
index e8213ad7..8ef965ce 100644
--- a/ippisite/ippidb/management/commands/import_v1_data.py
+++ b/ippisite/ippidb/management/commands/import_v1_data.py
@@ -471,7 +471,7 @@ select distinct protein.NumUniprot, domain.PfamNumAccession , complexe.NbCopy,
r = RefCompoundBiblio()
r.compound_id = c.id
r.bibliography_id = b.id
- r.compound_name = row[0]
+ r.compound_name = row[0].split('-')[1] #mysql format for this field is [PMID/WIPOID]-name: we remove the first part
r.save()
except Exception as e:
if options['stoponfail']:
--
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