From fc39b00d7a321976d29c79512f818f6bacc9e34b Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Herv=C3=A9=20=20MENAGER?= <herve.menager@pasteur.fr>
Date: Thu, 26 Jul 2018 18:18:01 +0200
Subject: [PATCH] parse correctly activity classes from MDDR SDF files
the list of activity classes is sep. by line breaks, NOT commas
Former-commit-id: 1cd78ad8f3c3215e1179bed6b6d3c31f34f92ed4
---
ippisite/ippidb/management/commands/import_v1_data.py | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/ippisite/ippidb/management/commands/import_v1_data.py b/ippisite/ippidb/management/commands/import_v1_data.py
index bdc02999..99853991 100644
--- a/ippisite/ippidb/management/commands/import_v1_data.py
+++ b/ippisite/ippidb/management/commands/import_v1_data.py
@@ -538,7 +538,7 @@ select distinct protein.NumUniprot, domain.PfamNumAccession , complexe.NbCopy,
m.dvpmt_phase = item.data['PHASE']
m.db_import_date = timezone.now()
m.save()
- for activity_class_name in item.data['ACTIV_CLASS'].split(','):
+ for activity_class_name in item.data['ACTIV_CLASS'].split('\n'):
activity_class, created = MDDRActivityClass.objects.get_or_create(
name=activity_class_name)
m.activity_classes.add(activity_class)
--
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