Commits · ae5d96715d85a13f1b29753fd6c451144e2e61a1 · iPPIDB / ippidb-web

27 Dec, 2019 1 commit
- Add documentation for ORCID authentication conf · ae5d9671
  Hervé MENAGER authored Dec 27, 2019
```
should facilitate solving #58 in the future
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  ae5d9671
26 Dec, 2019 13 commits
- reformatted tests.py with black · 1ae89da2
  Hervé MENAGER authored Dec 26, 2019
  
  1ae89da2
- correct the behaviour of Compound.is_validated property · 2de64b19
  Hervé MENAGER authored Dec 26, 2019
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and add unit tests for it
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  2de64b19
- remove debug prints · f9c80cf4
  Hervé MENAGER authored Dec 26, 2019
  
  f9c80cf4
- firwalld open port · 401437ca
  Fabien MAREUIL authored Dec 20, 2019 and Hervé MENAGER committed Dec 26, 2019
  
  401437ca
- template location bug fix · e056085a
  Fabien MAREUIL authored Dec 20, 2019 and Hervé MENAGER committed Dec 26, 2019
  
  e056085a
- path to template · 99287ba3
  Fabien MAREUIL authored Dec 20, 2019 and Hervé MENAGER committed Dec 26, 2019
  
  99287ba3
- delegate template to localhost · 3c3b402b
  Fabien MAREUIL authored Dec 20, 2019 and Hervé MENAGER committed Dec 26, 2019
  
  3c3b402b
- need template for ippidb-web.service · 59cf3695
  Fabien MAREUIL authored Dec 20, 2019 and Hervé MENAGER committed Dec 26, 2019
  
  59cf3695
- add branch for checkout · 2fca0706
  Fabien MAREUIL authored Dec 20, 2019 and Hervé MENAGER committed Dec 26, 2019
  
  2fca0706
- bug fix: set service start with dynamic port · 92d1ba32
  Fabien MAREUIL authored Dec 20, 2019 and Hervé MENAGER committed Dec 26, 2019
  
  92d1ba32
- include only validated compounds in LE-LLE and PCA computations · da169664
  Hervé MENAGER authored Dec 26, 2019
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WIP on #68
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  da169664
- fix bug introduced by removing "validated" from CompoundManager · 53128da8
  Hervé MENAGER authored Dec 26, 2019
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bug introduced in 0ab38431 and
visible here: https://gitlab.pasteur.fr/ippidb/ippidb-web/-/jobs/46382
WIP on #68
```
  53128da8
- control compound visibility in query mode · 0ab38431
  Hervé MENAGER authored Dec 26, 2019
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compounds are visible only if validated or if the user is the creator
or an admin.
WIP on #67
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  0ab38431
23 Dec, 2019 2 commits
- first approach at filtering viewed compounds based on permissions · e29e9a82
  Hervé MENAGER authored Dec 23, 2019
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WIP on #68
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  e29e9a82
- display a different user icon depending on permissions · 2b1c8e9c
  Hervé MENAGER authored Dec 23, 2019
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probably a work in progress, but could be informative
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  2b1c8e9c
19 Dec, 2019 5 commits
- fix bad Uniprot ID displayed for "partner" in pharma tab · 5af3f056
  Hervé MENAGER authored Dec 19, 2019
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fix #167
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  5af3f056
- black reformatting · c2856ba8
  Hervé MENAGER authored Dec 19, 2019
  
  c2856ba8
- make ID the first column in compounds CSV download · 873d4e13
  Hervé MENAGER authored Dec 19, 2019
  
  873d4e13
- make Compound families a cached property to have it ready in qs · 1ea54601
  Hervé MENAGER authored Dec 19, 2019
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this is to FIX #168
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  1ea54601
- remove dummy text from compounds list template · 54aa4085
  Hervé MENAGER authored Dec 19, 2019
  
  54aa4085
18 Dec, 2019 6 commits
- correct syntax for CI ansible syntax check step · b3047284
  Hervé MENAGER authored Dec 18, 2019
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(I'm fully aware of the irony here)
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  b3047284
- correct ansible syntax and add a CI step to check it systematically · 689469cd
  Hervé MENAGER authored Dec 18, 2019
  
  689469cd
- enable multiple ippidb-web instances on the same server · 0ae4f277
  Hervé MENAGER authored Dec 18, 2019
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by assigning different HTTP ports, and storing code and service config
in port-dependant paths
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  0ae4f277
- reformat ippidb.js · 6ef094c6
  Hervé MENAGER authored Dec 18, 2019
  
  6ef094c6
- remove chartsjs library from general js dependencies · 3bb0bbec
  Hervé MENAGER authored Dec 18, 2019
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(now only loaded when needed, i.e. about and compound card pages)
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  3bb0bbec
- externalize all js functions to js files · a3f20f3c
  Hervé MENAGER authored Dec 18, 2019
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(mostly charts)
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  a3f20f3c
17 Dec, 2019 1 commit
- correct the "disapeared radar chart" problem · f43bcb49
  Hervé MENAGER authored Dec 17, 2019
  
  f43bcb49
16 Dec, 2019 1 commit
- enable long DOIs (no length limit) · 100c0b71
  Hervé MENAGER authored Dec 16, 2019
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FIX #166
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  100c0b71
14 Dec, 2019 2 commits
- install pip3 via yum so that it is in /usr/bin (hence root path) · da5eb67e
  Hervé MENAGER authored Dec 14, 2019
  
  da5eb67e
- install pip3.6 as superuser · ad83689e
  Hervé MENAGER authored Dec 14, 2019
  
  ad83689e
09 Dec, 2019 2 commits
- correct indentation in ansible firewalld rules · 35f685d3
  Hervé MENAGER authored Dec 09, 2019
  
  35f685d3
- install and configure firewalld with ansible · 69b12b96
  Hervé MENAGER authored Dec 09, 2019
  
  69b12b96
07 Dec, 2019 7 commits
- remove user authentication in web server deployment · bb7461ed
  Hervé MENAGER authored Dec 07, 2019
  
  bb7461ed
- correct SSH key in JSON template for ansible system.yml deployment · bc3deb58
  Hervé MENAGER authored Dec 07, 2019
  
  bc3deb58
- run `authorized_key` system.yml ansible task as privileged user · aa350eb9
  Hervé MENAGER authored Dec 07, 2019
  
  aa350eb9
- ignore failing to stop ippidb-web in ansible deploy script · d00d6b7c
  Hervé MENAGER authored Dec 07, 2019
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this fails typically if the service has not been created yet
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  d00d6b7c
- another correction to system.yml · edf55e1b
  Hervé MENAGER authored Dec 07, 2019
  
  edf55e1b
- small correction to SSH setup syntax in ansible system.yml · 421224aa
  Hervé MENAGER authored Dec 07, 2019
  
  421224aa
- clean up the user creation and SSH setup in ansible system.yml · 4bfacd0a
  Hervé MENAGER authored Dec 07, 2019
  
  4bfacd0a