From eefd05175e87f576ea3f5c77a7f3a21bc39a40b3 Mon Sep 17 00:00:00 2001
From: nojhan <nojhan@nojhan.net>
Date: Sat, 8 Apr 2023 18:45:31 +0200
Subject: [PATCH] fix preproc
---
ext/Catch2 | 2 +-
scripts/paris/ranks_tsv_to_h5an.py | 6 +++---
2 files changed, 4 insertions(+), 4 deletions(-)
diff --git a/ext/Catch2 b/ext/Catch2
index 50bf00e..dc001fa 160000
--- a/ext/Catch2
+++ b/ext/Catch2
@@ -1 +1 @@
-Subproject commit 50bf00e266b32531385c9098f2676875c0aa8ac2
+Subproject commit dc001fa935d71b4b77f263fce405c9dbdfcbfe28
diff --git a/scripts/paris/ranks_tsv_to_h5an.py b/scripts/paris/ranks_tsv_to_h5an.py
index 8f45829..3dda45f 100644
--- a/scripts/paris/ranks_tsv_to_h5an.py
+++ b/scripts/paris/ranks_tsv_to_h5an.py
@@ -8,7 +8,7 @@ if __name__ == "__main__":
ranks = signatures.load_ranks_csv(sys.argv[1])
adata = ad.read(sys.argv[2])
- adata.layers["ranks"] = ranks
- adata.write(sys.argv[3], compressed="gzip")
+ adata.layers["ranks"] = ranks.T
+ adata.write(sys.argv[3], compression="gzip")
- print(adata, out=sys.stderr, flush=True)
+ print(adata, file=sys.stderr, flush=True)
--
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