diff --git a/jass/models/worktable.py b/jass/models/worktable.py index dfdd1c04af4fde01085c4b853adf3bd917788e97..a60bd1b3271dca4aac9f6c1d1fe236f2dd9ef0a4 100755 --- a/jass/models/worktable.py +++ b/jass/models/worktable.py @@ -182,15 +182,15 @@ def create_worktable_file(phenotype_ids: List[str], init_file_path: str, project format='table', data_columns=True) # Summary Table (contigency table) hdf_work.close() -def read_dataframe_and_stringize(hdf_path: str, frame: str): +def read_dataframe_and_stringize(project_hdf_path: str, frame: str): """ Read a dataframe from a worktable file and reformat Region and Chromosome numbers as strings. This will eventually be deprecated once the js code accepts integers instead of strings - :param hdf_path: path to the worktable file - :type hdf_path: str + :param project_hdf_path: path to the worktable file + :type project_hdf_path: str :param frame: name of the frame to be read :type frame: str :return: The dataframe with converted Region and CHR columns