From 09e541c9decf8ea76aa079aaef254eb915275db4 Mon Sep 17 00:00:00 2001
From: Remi PLANEL <rplanel@pasteur.fr>
Date: Mon, 29 Jul 2024 12:48:39 +0200
Subject: [PATCH] add link to general concept for antidefense
---
frontend/components/AnalysisResultDataTable.vue | 15 +++++++++------
frontend/components/SequenceBrowser.vue | 1 -
frontend/pages/analyses/[analysisId].vue | 1 -
3 files changed, 9 insertions(+), 8 deletions(-)
diff --git a/frontend/components/AnalysisResultDataTable.vue b/frontend/components/AnalysisResultDataTable.vue
index 4a1f5f8..dd642fa 100644
--- a/frontend/components/AnalysisResultDataTable.vue
+++ b/frontend/components/AnalysisResultDataTable.vue
@@ -18,7 +18,14 @@ const { setSelectedProtein } = useSelectedProtein()
const computedItems = computed(() => {
if (props.items?.length > 0) {
return props.items.map((item) => {
- if (item?.type) {
+ if (item.activity === 'Antidefense') {
+ const { wikiUrl } = useWikiUrl('/general-concepts/anti-defense-systems')
+ return {
+ ...item,
+ href: wikiUrl.value
+ }
+ }
+ else if (item?.type) {
const { wikiUrl } = useWikiUrl(`/defense-systems/${item.type.toLowerCase()}`)
return {
...item,
@@ -64,11 +71,7 @@ const dataTableProps = computed(() => {
<v-card-text>
<v-data-table v-model:items-per-page="itemsPerPage" v-bind="dataTableProps">
<template #[`item.type`]="{ item }">
- <v-chip v-if="item.activity === 'Defense'" :href="item?.href ? item.href : undefined"
- target="_blank">
- {{ item.type }}
- </v-chip>
- <v-chip v-else>
+ <v-chip :href="item?.href ? item.href : undefined" target="_blank">
{{ item.type }}
</v-chip>
</template>
diff --git a/frontend/components/SequenceBrowser.vue b/frontend/components/SequenceBrowser.vue
index bf85dc9..09b6c17 100644
--- a/frontend/components/SequenceBrowser.vue
+++ b/frontend/components/SequenceBrowser.vue
@@ -328,7 +328,6 @@ watch(selectedProtein, () => {
<div>
<v-card flat color="transparent" ref="gbContainer">
<v-toolbar flat>
-
<v-toolbar-title> {{ props.sequences.name }}</v-toolbar-title>
<v-switch v-model="displayHmmerHits" color="primary" label="Display HMM-only hits" hide-details="auto"
class="mr-2"></v-switch>
diff --git a/frontend/pages/analyses/[analysisId].vue b/frontend/pages/analyses/[analysisId].vue
index 4b9ae99..7c50bda 100644
--- a/frontend/pages/analyses/[analysisId].vue
+++ b/frontend/pages/analyses/[analysisId].vue
@@ -16,7 +16,6 @@ const { selectedProtein } = useSelectedProtein()
const runtimeConfig = useRuntimeConfig()
const itemsPerPage = ref(-1)
const itemsPerPageOptions = ref<{ title: string, value: number }[]>([{ title: "2", value: 2 }, { title: "5", value: 5 }, { title: "10", value: 10 }, { title: "All", value: -1 }])
-const onlyWithDefenseSystem = ref(true)
const goTo = useGoTo()
const analysisId = computed(() => {
if (Array.isArray(route.params.analysisId)) return null
--
GitLab