diff --git a/content/3.defense-systems/sma.md b/content/3.defense-systems/fs_sma.md similarity index 94% rename from content/3.defense-systems/sma.md rename to content/3.defense-systems/fs_sma.md index 5399d3199fa859152f773a56131d225f11c99f83..98d2c09f756dd9b1360b99704fa9c47fc200e46f 100644 --- a/content/3.defense-systems/sma.md +++ b/content/3.defense-systems/fs_sma.md @@ -1,5 +1,5 @@ --- -title: SMA +title: FS_Sma layout: article tableColumns: article: @@ -14,7 +14,7 @@ relevantAbstracts: --- -# SMA +# FS_Sma ## Description SMA (single-protein MazF-like antiphage system) was identified in a phage-inducible chromosomal island (PICI) found in *Staphylococcus aureus* :ref{doi=10.1016/j.cell.2022.07.014}. SMA was shown to inhibit phage infection and to inhibit the formation of new virions after prophage induction. @@ -23,18 +23,13 @@ SMA (single-protein MazF-like antiphage system) was identified in a phage-induci The SMA protein comprises a domain analogous to MazF. MazF a protein that is normally part of the MazEF toxin-antitoxin systems, in which MazF is a toxic endoribonuclease that targets mRNA :ref{doi=10.1016/s1097-2765(03)00402-7}. As far as we are aware, the precise molecular mechanism of SMA is unknown. -## Example of genomic structure - -## Distribution of the system among prokaryotes - - ## Example of genomic structure The Sma is composed of 1 protein: Sma. Here is an example found in the RefSeq database: -{max-width=750px} +{max-width=750px} The Sma system in *Staphylococcus aureus* (GCF_022869625.1, NZ_CP064365) is composed of 1 protein: Sma (WP_000041883.1) @@ -44,19 +39,19 @@ Among the 22,803 complete genomes of RefSeq, the Sma is detected in 578 genomes The system was detected in 20 different species. -{max-width=750px} +{max-width=750px} Proportion of genome encoding the sma system for the 14 phyla with more than 50 genomes in the RefSeq database. ## Structure -### sma +### FS_Sma ::molstar-pdbe-plugin --- height: 700 -dataUrl: /sma/sma__Sma-plddts_94.14969.pdb +dataUrl: /fs_sma/FS_Sma__Sma-plddts_94.14969.pdb --- :: diff --git a/public/sma/Distribution_sma.svg b/public/fs_sma/Distribution_FS_Sma.svg similarity index 100% rename from public/sma/Distribution_sma.svg rename to public/fs_sma/Distribution_FS_Sma.svg diff --git a/public/sma/sma.svg b/public/fs_sma/FS_Sma.svg similarity index 100% rename from public/sma/sma.svg rename to public/fs_sma/FS_Sma.svg diff --git a/public/sma/sma__Sma-plddts_94.14969.pdb b/public/fs_sma/FS_Sma__Sma-plddts_94.14969.pdb similarity index 100% rename from public/sma/sma__Sma-plddts_94.14969.pdb rename to public/fs_sma/FS_Sma__Sma-plddts_94.14969.pdb