diff --git a/components/content/ArticleDoi.vue b/components/content/ArticleDoi.vue
index 4464434b3d096870e1aa469dde836e0b0e016204..49d4a829730deaf54fe634e7b8dcf5278c99db62 100644
--- a/components/content/ArticleDoi.vue
+++ b/components/content/ArticleDoi.vue
@@ -1,39 +1,55 @@
<script setup lang="ts">
-const props = defineProps<{
- doi: string;
+import { useDisplay } from 'vuetify'
+
+export interface Props {
+ index: number
+ doi: string
divider: boolean
-}>();
+ enumerate: boolean
+ title?: string
+ abstract?: string
+}
+const props = withDefaults(defineProps<Props>(), {
+ enumerate: true,
+})
const { article } = useFetchArticle(props.doi)
-
+const { mobile } = useDisplay()
const show = ref(false)
-console.log(article)
+
+const articleTitle = computed(() => { return props?.title ?? article.value?.title ?? props.doi })
+const articleAbstract = computed(() => { return props.abstract ?? article.value?.abstract })
</script>
<template>
- <v-list-item :href="article?.href" :target="article?.target">
- <template #prepend>
+ <v-list-item :href="article?.href" :target="article?.target" density="compact" class="px-1">
+ <template #prepend v-if="!mobile && enumerate">
+ <v-avatar color="primary" size="small" density="compact" variant="tonal">
+ {{ props.index }}
+ </v-avatar>
+ </template>
+ <!-- <template #append v-if="!mobile">
<v-avatar>
<v-icon>{{ article?.prependIcon }}</v-icon>
</v-avatar>
- </template>
- <v-card flat color="transparent" density="compact">
-
- <v-card-item density="compact">
- <v-card-title><span class="text-subtitle-1 font-weight-bold">{{ article?.title ?? 'no title' }}</span></v-card-title>
- <v-card-subtitle> {{ article?.subtitle ?? "no subtitle" }}</v-card-subtitle>
+ </template> -->
+ <v-card flat color="transparent" density="compact" class="my-0">
+ <v-card-item density="compact" :class="mobile ? 'px-0' : null">
+ <v-card-title><span class="text-subtitle-1 font-weight-bold">{{ articleTitle
+ }}</span></v-card-title>
+ <v-card-subtitle> {{ article?.subtitle ?? "no authors" }}</v-card-subtitle>
<v-card-subtitle> {{ article?.containerTitle ?? "no containerTitle" }} ({{ article?.year
}})</v-card-subtitle>
</v-card-item>
- <v-card-actions v-if="article?.abstract" density="compact">
- <v-btn size="x-small" variant="outlined" :append-icon="show ? 'mdi-chevron-up' : 'mdi-chevron-down'"
+ <v-card-item density="compact" :class="mobile ? 'px-0' : null">
+ <v-btn v-if="articleAbstract" size="x-small" variant="outlined"
+ :append-icon="show ? 'mdi-chevron-up' : 'mdi-chevron-down'"
@click.stop.prevent="show = !show">Abstract</v-btn>
- </v-card-actions>
-
+ </v-card-item>
<v-expand-transition>
<v-card v-show="show" flat color="transparent">
<v-card-text>
- {{ article?.abstract }}
+ {{ articleAbstract }}
</v-card-text>
</v-card>
diff --git a/components/content/ArticleDoiList.vue b/components/content/ArticleDoiList.vue
index c436e9aba9d2b3f85935880a6119a16f91da28ef..fe7727a672fbe67a3741e520b42d97b36550dc03 100644
--- a/components/content/ArticleDoiList.vue
+++ b/components/content/ArticleDoiList.vue
@@ -1,11 +1,11 @@
<script setup lang="ts">
const props = defineProps<{
- items: string[];
+ items: { doi: string, title?: string, divider: boolean, abstract?: string }[];
}>();
</script>
<template>
- <v-list>
- <ArticleDoi v-for="item in items" :key="item" :doi="item" />
-
+ <v-list density="compact">
+ <ArticleDoi v-for="item, index in props.items" :key="item.doi" :index="index + 1" :doi="item.doi"
+ :title="item?.title" :divider="item.divider" :abstract="item?.abstract" />
</v-list>
</template>
\ No newline at end of file
diff --git a/components/content/ListSystems.vue b/components/content/ListSystems.vue
index beb7ef1162bd50e3cf0af3bf8c1eafc8fcaa564f..cd2ff4b55eaa8cf180992f1d7900fc33b3e677d5 100644
--- a/components/content/ListSystems.vue
+++ b/components/content/ListSystems.vue
@@ -30,14 +30,16 @@ function filterOnlyCapsText(value, query, item) {
<v-text-field v-model="search" density="compact" variant="underlined" prepend-inner-icon="mdi-magnify"
label="Search for defense systems" single-line hide-details class="mx-2" clearable></v-text-field>
</v-toolbar>
- <v-data-table :items-per-page="itemsPerParge" v-model:sort-by="sortBy" :headers="props.headers"
+ <v-data-table :items-per-page="itemsPerParge" v-model:sort-by="sortBy" :headers="props.headers" density="compact"
:custom-filter="filterOnlyCapsText" :items="props.systems" :search="search">
<template #[`item.system`]="{ item }">
<v-chip variant="text" link :to="`${item.columns.system.path}`">{{
item.columns.system.name }}</v-chip>
</template>
- <template #[`item.doi`]="{ item }">
- <ArticleDoiList v-if="item.columns?.doi" :items="[item.columns.doi]" :divider="false" />
+ <template #[`item.article`]="{ item }">
+ <ArticleDoi v-if="item.columns?.article" :doi="item.columns.article.doi"
+ :title="item.columns.article?.title" :abstract="item.columns.article?.abstract" :divider="false"
+ :enumerate="false" />
</template>
</v-data-table>
</v-card>
diff --git a/content/0.index.md b/content/0.index.md
index f66ffa6a6d2f1770da4abe776669d1f0e6bc61aa..dcf8f3e5ff8090ae162756e0f5e2a13771e3fde5 100644
--- a/content/0.index.md
+++ b/content/0.index.md
@@ -50,12 +50,14 @@ Tal N, Sorek R. SnapShot: Bacterial immunity. Cell. 2022 Feb 3;185(3):578-578.e1
::article-doi-list
---
items:
- - 10.1126/science.1138140
- - 10.1038/nmicrobiol.2017.92
- - 10.1128/jb.65.2.113-121.1953
- - 10.1126/science.aar4120
- - 10.1126/science.aba0372
- - 10.1038/s41586-019-1894-8
- - 10.1128/jb.64.4.557-569.1952
+ - doi: 10.1126/science.1138140
+ abstract: |
+ Clustered regularly interspaced short palindromic repeats (CRISPR) are a distinctive feature of the genomes of most Bacteria and Archaea and are thought to be involved in resistance to bacteriophages. We found that, after viral challenge, bacteria integrated new spacers derived from phage genomic sequences. Removal or addition of particular spacers modified the phage-resistance phenotype of the cell. Thus, CRISPR, together with associated cas genes, provided resistance against phages, and resistance specificity is determined by spacer-phage sequence similarity.
+ - doi: 10.1038/nmicrobiol.2017.92
+ - doi: 10.1128/jb.65.2.113-121.1953
+ - doi: 10.1126/science.aar4120
+ - doi: 10.1126/science.aba0372
+ - doi: 10.1038/s41586-019-1894-8
+ - doi: 10.1128/jb.64.4.557-569.1952
---
::
diff --git a/content/2.defense-systems/abi2.md b/content/2.defense-systems/abi2.md
index b7f40795ec77821552d12ecd1adaf600627313ad..d13072925777a978ff9f3549b9f34db0bac62bb6 100644
--- a/content/2.defense-systems/abi2.md
+++ b/content/2.defense-systems/abi2.md
@@ -1,7 +1,10 @@
---
title: Abi2
tableColumns:
- doi: 10.1016/j.mib.2005.06.006
+ article:
+ doi: 10.1016/j.mib.2005.06.006
+ abstract: |
+ Abortive infection (Abi) systems, also called phage exclusion, block phage multiplication and cause premature bacterial cell death upon phage infection. This decreases the number of progeny particles and limits their spread to other cells allowing the bacterial population to survive. Twenty Abi systems have been isolated in Lactococcus lactis, a bacterium used in cheese-making fermentation processes, where phage attacks are of economical importance. Recent insights in their expression and mode of action indicate that, behind diverse phenotypic and molecular effects, lactococcal Abis share common traits with the well-studied Escherichia coli systems Lit and Prr. Abis are widespread in bacteria, and recent analysis indicates that Abis might have additional roles other than conferring phage resistance.
---
The Abi2 system is composed of one protein: Abi_2.
diff --git a/content/2.defense-systems/abia.md b/content/2.defense-systems/abia.md
index bb5ea85175fa0591a5b3a9ec84915fe1bb113b16..0874239e858143d2f13a7e35f1a8c4267dda73c4 100644
--- a/content/2.defense-systems/abia.md
+++ b/content/2.defense-systems/abia.md
@@ -1,7 +1,10 @@
---
title: AbiA
tableColumns:
- doi: 10.1016/j.mib.2005.06.006
+ article:
+ doi: 10.1016/j.mib.2005.06.006
+ abstract: |
+ Abortive infection (Abi) systems, also called phage exclusion, block phage multiplication and cause premature bacterial cell death upon phage infection. This decreases the number of progeny particles and limits their spread to other cells allowing the bacterial population to survive. Twenty Abi systems have been isolated in Lactococcus lactis, a bacterium used in cheese-making fermentation processes, where phage attacks are of economical importance. Recent insights in their expression and mode of action indicate that, behind diverse phenotypic and molecular effects, lactococcal Abis share common traits with the well-studied Escherichia coli systems Lit and Prr. Abis are widespread in bacteria, and recent analysis indicates that Abis might have additional roles other than conferring phage resistance.
---
The AbiA system have been describe in a total of 2 subsystems.
@@ -37,9 +40,12 @@ A system from *lactococcal plasmid* in *lactococci* has an anti-phage effect aga
::article-doi-list
---
items:
- - 10.1023/A:1002027321171
- - 10.1016/j.mib.2005.06.006
- - 10.1093/nar/gkac467
+ - doi: 10.1023/A:1002027321171
+ title: Bacteriophage defence systems in lactic acid bacteria
+ - doi: 10.1016/j.mib.2005.06.006
+ abstract: |
+ Abortive infection (Abi) systems, also called phage exclusion, block phage multiplication and cause premature bacterial cell death upon phage infection. This decreases the number of progeny particles and limits their spread to other cells allowing the bacterial population to survive. Twenty Abi systems have been isolated in Lactococcus lactis, a bacterium used in cheese-making fermentation processes, where phage attacks are of economical importance. Recent insights in their expression and mode of action indicate that, behind diverse phenotypic and molecular effects, lactococcal Abis share common traits with the well-studied Escherichia coli systems Lit and Prr. Abis are widespread in bacteria, and recent analysis indicates that Abis might have additional roles other than conferring phage resistance.
+ - doi: 10.1093/nar/gkac467
---
::
diff --git a/content/2.defense-systems/abib.md b/content/2.defense-systems/abib.md
index 0428f5350d231959de2f73c8d626538f44426bf9..c3ad1f3eae3df1a6b6ddb395dc674e9ae47480f9 100644
--- a/content/2.defense-systems/abib.md
+++ b/content/2.defense-systems/abib.md
@@ -1,7 +1,10 @@
---
title: AbiB
tableColumns:
- doi: 10.1016/j.mib.2005.06.006
+ article:
+ doi: 10.1016/j.mib.2005.06.006
+ abstract: |
+ Abortive infection (Abi) systems, also called phage exclusion, block phage multiplication and cause premature bacterial cell death upon phage infection. This decreases the number of progeny particles and limits their spread to other cells allowing the bacterial population to survive. Twenty Abi systems have been isolated in Lactococcus lactis, a bacterium used in cheese-making fermentation processes, where phage attacks are of economical importance. Recent insights in their expression and mode of action indicate that, behind diverse phenotypic and molecular effects, lactococcal Abis share common traits with the well-studied Escherichia coli systems Lit and Prr. Abis are widespread in bacteria, and recent analysis indicates that Abis might have additional roles other than conferring phage resistance.
---
The AbiB system is composed of one protein: AbiB.
@@ -33,8 +36,8 @@ A system from *lactococcal plasmid* in *lactococci* has an anti-phage effect aga
::article-doi-list
---
items:
- - 10.1023/A:1002027321171
- - 10.1016/j.mib.2005.06.006
+ - doi: 10.1023/A:1002027321171
+ - doi: 10.1016/j.mib.2005.06.006
---
::
diff --git a/content/2.defense-systems/abic.md b/content/2.defense-systems/abic.md
index 26d4e748ffc0bbf72e64bc8f7e3a8510e9cd4c0d..5ab8dd9b6d2d8d81327ed6fc940c142158a6af0a 100644
--- a/content/2.defense-systems/abic.md
+++ b/content/2.defense-systems/abic.md
@@ -1,7 +1,5 @@
---
title: AbiC
-tableColumns:
- doi: 10.1016/j.mib.2005.06.006
---
The AbiC system is composed of one protein: AbiC.
@@ -39,8 +37,8 @@ A system from *lactococcal plasmid* in *lactococci* has an anti-phage effect aga
::article-doi-list
---
items:
- - 10.1023/A:1002027321171
- - 10.1016/j.mib.2005.06.006
+ - doi: 10.1023/A:1002027321171
+ - doi: 10.1016/j.mib.2005.06.006
---
::
diff --git a/content/2.defense-systems/abid.md b/content/2.defense-systems/abid.md
index 6b1230e0ad38a5de95a887f41a34f7368efa0f8f..083702dd0d108d74372dc1a452c63cd5409cde50 100644
--- a/content/2.defense-systems/abid.md
+++ b/content/2.defense-systems/abid.md
@@ -1,7 +1,5 @@
---
title: AbiD
-tableColumns:
- doi: 10.1016/j.mib.2005.06.006
---
The AbiD system is composed of one protein: AbiD.
@@ -33,8 +31,8 @@ A system from *lactococcal plasmid* in *lactococci* has an anti-phage effect aga
::article-doi-list
---
items:
- - 10.1023/A:1002027321171
- - 10.1016/j.mib.2005.06.006
+ - doi: 10.1023/A:1002027321171
+ - doi: 10.1016/j.mib.2005.06.006
---
::
diff --git a/content/2.defense-systems/abie.md b/content/2.defense-systems/abie.md
index b83cbadb2765f6cc52db0b6d73979019a3f64114..a3fac99810059ac5968574dda14f3da6b2bc7cf9 100644
--- a/content/2.defense-systems/abie.md
+++ b/content/2.defense-systems/abie.md
@@ -1,7 +1,5 @@
---
title: AbiE
-tableColumns:
- doi: 10.1016/j.mib.2005.06.006
---
AbiE is a family of an anti-phage defense systems. They act through a Toxin-Antitoxin mechanism, and are comprised of a pair of genes, with one gene being toxic while the other confers immunity to this toxicity.Â
@@ -45,9 +43,9 @@ A system from *lactococcal plasmid* in *lactococci* has an anti-phage effect aga
::article-doi-list
---
items:
- - 10.1023/A:1002027321171
- - 10.1016/j.mib.2005.06.006
- - 10.1093/nar/gkt1419
+ - doi: 10.1023/A:1002027321171
+ - doi: 10.1016/j.mib.2005.06.006
+ - doi: 10.1093/nar/gkt1419
---
::
diff --git a/content/2.defense-systems/abig.md b/content/2.defense-systems/abig.md
index b21a9877ffff4db9ef015ed6073b418494bba538..3597e9b29588556721a933be24db9a02d2da0bd2 100644
--- a/content/2.defense-systems/abig.md
+++ b/content/2.defense-systems/abig.md
@@ -1,7 +1,5 @@
---
title: AbiG
-tableColumns:
- doi: 10.1016/j.mib.2005.06.006
---
The AbiG system is composed of 2 proteins: AbiGi and, AbiGii.
@@ -33,8 +31,8 @@ A system from *lactococcal plasmid* in *lactococci* has an anti-phage effect aga
::article-doi-list
---
items:
- - 10.1023/A:1002027321171
- - 10.1016/j.mib.2005.06.006
+ - doi: 10.1023/A:1002027321171
+ - doi: 10.1016/j.mib.2005.06.006
---
::
diff --git a/content/2.defense-systems/abih.md b/content/2.defense-systems/abih.md
index 32d4ddc2264c9d617486af03b0ff6bef7f0cd372..7560ae6e4c0461c5b9b492008255ce7d73b0d1be 100644
--- a/content/2.defense-systems/abih.md
+++ b/content/2.defense-systems/abih.md
@@ -1,7 +1,10 @@
---
title: AbiH
tableColumns:
- doi: 10.1111/j.1574-6968.1996.tb08446.x
+ article:
+ doi: 10.1111/j.1574-6968.1996.tb08446.x
+ abstract: |
+ A gene which encodes resistance by abortive infection (Abi+) to bacteriophage was cloned from Lactococcus lactis ssp. lactis biovar. diacetylactis S94. This gene was found to confer a reduction in efficiency of plating and plaque size for prolate-headed bacteriophage φ53 (group I of homology) and total resistance to the small isometric-headed bacteriophage φ59 (group III of homology). The cloned gene is predicted to encode a polypeptide of 346 amino acid residues with a deduced molecular mass of 41 455 Da. No homology with any previously described genes was found. A probe was used to determine the presence of this gene in two strains on 31 tested.
---
## Example of genomic structure
@@ -35,9 +38,9 @@ A system from *lactococci* in *lactococci* has an anti-phage effect against 936,
::article-doi-list
---
items:
- - 10.1023/A:1002027321171
- - 10.1016/j.mib.2005.06.006
- - 10.1111/j.1574-6968.1996.tb08446.x
+ - doi: 10.1023/A:1002027321171
+ - doi: 10.1016/j.mib.2005.06.006
+ - doi: 10.1111/j.1574-6968.1996.tb08446.x
---
::
diff --git a/content/2.defense-systems/abii.md b/content/2.defense-systems/abii.md
index 29cf153b50b9558a9ff06434cb647c58fabc6abf..a53e4fc086e782068cfb3db899826efc4c32b338 100644
--- a/content/2.defense-systems/abii.md
+++ b/content/2.defense-systems/abii.md
@@ -33,8 +33,8 @@ A system from *lactococcal plasmid* in *lactococci* has an anti-phage effect aga
::article-doi-list
---
items:
- - 10.1023/A:1002027321171
- - 10.1016/j.mib.2005.06.006
+ - doi: 10.1023/A:1002027321171
+ - doi: 10.1016/j.mib.2005.06.006
---
::
diff --git a/content/2.defense-systems/abij.md b/content/2.defense-systems/abij.md
index c0fda6f50622e696079136ddb9ef8a9b2b88640b..449c1f8edad6e8a70ea322ff37d82972a410d862 100644
--- a/content/2.defense-systems/abij.md
+++ b/content/2.defense-systems/abij.md
@@ -33,8 +33,8 @@ A system from *lactococcal plasmid* in *lactococci* has an anti-phage effect aga
::article-doi-list
---
items:
- - 10.1023/A:1002027321171
- - 10.1016/j.mib.2005.06.006
+ - doi: 10.1023/A:1002027321171
+ - doi: 10.1016/j.mib.2005.06.006
---
::
diff --git a/content/2.defense-systems/abik.md b/content/2.defense-systems/abik.md
index 03e4a8ad8e681f0858a10868617325b823483b38..95064f3a1752cc45fcbb645f1e4a20704c7cc557 100644
--- a/content/2.defense-systems/abik.md
+++ b/content/2.defense-systems/abik.md
@@ -33,9 +33,9 @@ A system from *lactococcal plasmid* in *lactococci* has an anti-phage effect aga
::article-doi-list
---
items:
- - 10.1023/A:1002027321171
- - 10.1016/j.mib.2005.06.006
- - 10.1093/nar/gkac467
+ - doi: 10.1023/A:1002027321171
+ - doi: 10.1016/j.mib.2005.06.006
+ - doi: 10.1093/nar/gkac467
---
::
diff --git a/content/2.defense-systems/abil.md b/content/2.defense-systems/abil.md
index 1acfc57263796a1926f67d2197f52c56bd104bed..a430cc78a207a150e8e4a7ec095a492aede4357c 100644
--- a/content/2.defense-systems/abil.md
+++ b/content/2.defense-systems/abil.md
@@ -33,8 +33,8 @@ A system from *lactococcal plasmid* in *lactococci* has an anti-phage effect aga
::article-doi-list
---
items:
- - 10.1023/A:1002027321171
- - 10.1016/j.mib.2005.06.006
+ - doi: 10.1023/A:1002027321171
+ - doi: 10.1016/j.mib.2005.06.006
---
::
diff --git a/content/2.defense-systems/abin.md b/content/2.defense-systems/abin.md
index fbe6d414db94ae241f18aec3f6da047ffd4911ed..8bf8cc5d3dda9483a8a0d125fec5a0bc060aceed 100644
--- a/content/2.defense-systems/abin.md
+++ b/content/2.defense-systems/abin.md
@@ -33,8 +33,8 @@ A system from *lactococcal prophage* in *lactococci* has an anti-phage effect ag
::article-doi-list
---
items:
- - 10.1023/A:1002027321171
- - 10.1016/j.mib.2005.06.006
+ - doi: 10.1023/A:1002027321171
+ - doi: 10.1016/j.mib.2005.06.006
---
::
diff --git a/content/2.defense-systems/abio.md b/content/2.defense-systems/abio.md
index 6ca858e86b76a8fe95e25bbe3ae10443c8f8fbf9..e7e1d1712e70091b12fe605e5a1fa818acc53594 100644
--- a/content/2.defense-systems/abio.md
+++ b/content/2.defense-systems/abio.md
@@ -33,8 +33,8 @@ A system from *lactococcal plasmid* in *lactococci* has an anti-phage effect aga
::article-doi-list
---
items:
- - 10.1023/A:1002027321171
- - 10.1016/j.mib.2005.06.006
+ - doi: 10.1023/A:1002027321171
+ - doi: 10.1016/j.mib.2005.06.006
---
::
diff --git a/content/2.defense-systems/abip2.md b/content/2.defense-systems/abip2.md
index 014c1d0229fa09e4c207a2c7cb0e1f9f0dbfc09f..d27812ac410f642f71d9d914999868934c8baae2 100644
--- a/content/2.defense-systems/abip2.md
+++ b/content/2.defense-systems/abip2.md
@@ -35,9 +35,9 @@ A system from *lactococcal plasmid* in *lactococci* has an anti-phage effect aga
::article-doi-list
---
items:
- - 10.1023/A:1002027321171
- - 10.1016/j.mib.2005.06.006
- - 10.1093/nar/gkac467
+ - doi: 10.1023/A:1002027321171
+ - doi: 10.1016/j.mib.2005.06.006
+ - doi: 10.1093/nar/gkac467
---
::
diff --git a/content/2.defense-systems/abiq.md b/content/2.defense-systems/abiq.md
index f7d012e175a23a44f46d2830db464394cbadee18..f676d709b69b602e95d9cf6a079102e12386c7f2 100644
--- a/content/2.defense-systems/abiq.md
+++ b/content/2.defense-systems/abiq.md
@@ -33,9 +33,9 @@ A system from *lactococcal plasmid* in *lactococci* has an anti-phage effect aga
::article-doi-list
---
items:
- - 10.1023/A:1002027321171
- - 10.1016/j.mib.2005.06.006
- - 10.1128/AEM.64.12.4748-4756.1998
+ - doi: 10.1023/A:1002027321171
+ - doi: 10.1016/j.mib.2005.06.006
+ - doi: 10.1128/AEM.64.12.4748-4756.1998
---
::
diff --git a/content/2.defense-systems/abir.md b/content/2.defense-systems/abir.md
index 0d1b43c104e27a80b6814af82922e122a54c13ce..a20e293edf0adf675aabf8fc2e1bf7109789524a 100644
--- a/content/2.defense-systems/abir.md
+++ b/content/2.defense-systems/abir.md
@@ -33,8 +33,8 @@ A system from *lactococcal plasmid* in *lactococci* has an anti-phage effect aga
::article-doi-list
---
items:
- - 10.1023/A:1002027321171
- - 10.1016/j.mib.2005.06.006
+ - doi: 10.1023/A:1002027321171
+ - doi: 10.1016/j.mib.2005.06.006
---
::
diff --git a/content/2.defense-systems/abit.md b/content/2.defense-systems/abit.md
index 218159460f7a824d57241593fac3209762e7b78c..f5ed6e477d6826ad71a2dc9148dac4dfdcb1654c 100644
--- a/content/2.defense-systems/abit.md
+++ b/content/2.defense-systems/abit.md
@@ -33,8 +33,8 @@ A system from *lactococcal plasmid* in *lactococci* has an anti-phage effect aga
::article-doi-list
---
items:
- - 10.1023/A:1002027321171
- - 10.1016/j.mib.2005.06.006
+ - doi: 10.1023/A:1002027321171
+ - doi: 10.1016/j.mib.2005.06.006
---
::
diff --git a/content/2.defense-systems/abiu.md b/content/2.defense-systems/abiu.md
index abf4943750165fc608270a0b19c40d12268ec81b..3fe09695443021d7f0ec7931c64421478bced0fb 100644
--- a/content/2.defense-systems/abiu.md
+++ b/content/2.defense-systems/abiu.md
@@ -33,8 +33,8 @@ A system from *lactococcal plasmid* in *lactococci* has an anti-phage effect aga
::article-doi-list
---
items:
- - 10.1023/A:1002027321171
- - 10.1016/j.mib.2005.06.006
+ - doi: 10.1023/A:1002027321171
+ - doi: 10.1016/j.mib.2005.06.006
---
::
diff --git a/content/2.defense-systems/abiv.md b/content/2.defense-systems/abiv.md
index 162b5edd31ab24883c5536930240fa00eefded69..c9a67d7fe5cfcff60c88c91293543878d0a1e4d9 100644
--- a/content/2.defense-systems/abiv.md
+++ b/content/2.defense-systems/abiv.md
@@ -1,7 +1,8 @@
---
title: AbiV
tableColumns:
- doi: 10.1128/AEM.00780-08
+ article:
+ doi: 10.1128/AEM.00780-08
---
## Example of genomic structure
@@ -35,8 +36,8 @@ A system from *Lactococcus lactis* in *Lactococcus lactis* has an anti-phage eff
::article-doi-list
---
items:
- - 10.1023/A:1002027321171
- - 10.1128/AEM.00780-08
+ - doi: 10.1023/A:1002027321171
+ - doi: 10.1128/AEM.00780-08
---
::
diff --git a/content/2.defense-systems/abiz.md b/content/2.defense-systems/abiz.md
index eaef64217c1c477885c9c3c81f62c08149439bf5..f82e3574793c1db1f164e1820be492ab68c0ec05 100644
--- a/content/2.defense-systems/abiz.md
+++ b/content/2.defense-systems/abiz.md
@@ -33,8 +33,8 @@ A system from *Lactococcus lactis* in *Lactococcus lactis* has an anti-phage eff
::article-doi-list
---
items:
- - 10.1023/A:1002027321171
- - 10.1128/JB.00904-06
+ - doi: 10.1023/A:1002027321171
+ - doi: 10.1128/JB.00904-06
---
::
diff --git a/content/2.defense-systems/aditi.md b/content/2.defense-systems/aditi.md
index 84d983b3be9a0a27d80b920bb69c7d1893147160..090a5eb4256387dcaf15ff413dcf9b57618b7065 100644
--- a/content/2.defense-systems/aditi.md
+++ b/content/2.defense-systems/aditi.md
@@ -33,7 +33,7 @@ A system from *Saccharibacillus kuerlensis* in *Bacillus subtilis* has an anti-p
::article-doi-list
---
items:
- - 10.1016/j.chom.2022.09.017
+ - doi: 10.1016/j.chom.2022.09.017
---
::
diff --git a/content/2.defense-systems/avast.md b/content/2.defense-systems/avast.md
index d58bd1d494003c282c33ab4525de232c23108bf4..2bc639dc64ba6c108272ea3cbbb1a2a3fa68d960 100644
--- a/content/2.defense-systems/avast.md
+++ b/content/2.defense-systems/avast.md
@@ -92,8 +92,8 @@ Subsystem CcAvs4 with a system from *Corallococcus coralloides* in *Escherichia
::article-doi-list
---
items:
- - 10.1126/science.aba0372
- - 10.1126/science.abm4096
+ - doi: 10.1126/science.aba0372
+ - doi: 10.1126/science.abm4096
---
::
diff --git a/content/2.defense-systems/azaca.md b/content/2.defense-systems/azaca.md
index d50b48b1c9694426ae6d11f0df278ef6107a0f7a..bdf5238f6798571889c94797fc02f4f74744c8b8 100644
--- a/content/2.defense-systems/azaca.md
+++ b/content/2.defense-systems/azaca.md
@@ -35,7 +35,7 @@ A system from *Bacillus massilioanorexius* in *Bacillus subtilis* has an anti-ph
::article-doi-list
---
items:
- - 10.1016/j.chom.2022.09.017
+ - doi: 10.1016/j.chom.2022.09.017
---
::
diff --git a/content/2.defense-systems/borvo.md b/content/2.defense-systems/borvo.md
index 9319466037c406e49593b881c7fd8dfd8cbb854f..25ac50d7cced68a19a8374da94cd626df614c998 100644
--- a/content/2.defense-systems/borvo.md
+++ b/content/2.defense-systems/borvo.md
@@ -33,7 +33,7 @@ A system from *Escherichia coli* in *Escherichia coli* has an anti-phage effect
::article-doi-list
---
items:
- - 10.1016/j.chom.2022.09.017
+ - doi: 10.1016/j.chom.2022.09.017
---
::
diff --git a/content/2.defense-systems/brex.md b/content/2.defense-systems/brex.md
index 7c7338ee0e9a3a451f799a559fc1a3fcb178dad2..6444013cdd02c003e15eade51e7abecb52aa7653 100644
--- a/content/2.defense-systems/brex.md
+++ b/content/2.defense-systems/brex.md
@@ -62,9 +62,9 @@ A system from *Bacillus cereus* in *Bacillus subtilis* has an anti-phage effect
::article-doi-list
---
items:
- - 10.1093/nar/gkaa290
- - 10.1093/nar/gky1125
- - 10.15252/embj.201489455
+ - doi: 10.1093/nar/gkaa290
+ - doi: 10.1093/nar/gky1125
+ - doi: 10.15252/embj.201489455
---
::
diff --git a/content/2.defense-systems/bsta.md b/content/2.defense-systems/bsta.md
index 9e141e3a01bd3afdf5e5e960e6cad8c86ae67769..bf04f9f667b32fcb6a0c8fe829116480490cae03 100644
--- a/content/2.defense-systems/bsta.md
+++ b/content/2.defense-systems/bsta.md
@@ -51,7 +51,7 @@ A system from *Salmonella Typhimurium's BTP1* in *Escherichia coli* has an anti-
::article-doi-list
---
items:
- - 10.1016/j.chom.2021.09.002
+ - doi: 10.1016/j.chom.2021.09.002
---
::
diff --git a/content/2.defense-systems/bunzi.md b/content/2.defense-systems/bunzi.md
index 72c1f29f48ef443e11c7691755a7060c318bdfdf..6986429c90118e459fa5d4e80157bb717ec329cb 100644
--- a/content/2.defense-systems/bunzi.md
+++ b/content/2.defense-systems/bunzi.md
@@ -33,7 +33,7 @@ A system from *Ligilactobacillus animalis* in *Bacillus subtilis* has an anti-ph
::article-doi-list
---
items:
- - 10.1016/j.chom.2022.09.017
+ - doi: 10.1016/j.chom.2022.09.017
---
::
diff --git a/content/2.defense-systems/caprel.md b/content/2.defense-systems/caprel.md
index 5ee735c55af3e19e17df14871c607f05743f679c..8c35327d19d970e3c4878dea2b6ebfba77cfc5fb 100644
--- a/content/2.defense-systems/caprel.md
+++ b/content/2.defense-systems/caprel.md
@@ -49,7 +49,7 @@ A system from *Klebsiella pneumoniae* in *Escherichia coli* has an anti-phage ef
::article-doi-list
---
items:
- - 10.1038/s41586-022-05444-z
+ - doi: 10.1038/s41586-022-05444-z
---
::
diff --git a/content/2.defense-systems/cbass.md b/content/2.defense-systems/cbass.md
index 6782bd6dff9c82d8de03b1cffa3c305970caa8b3..8d61883581faf2268b39e618dbec0158dcfbd44c 100644
--- a/content/2.defense-systems/cbass.md
+++ b/content/2.defense-systems/cbass.md
@@ -51,11 +51,11 @@ A system from *Pseudomonas aeruginosa* in *Pseudomonas aeruginosa* has an anti-p
::article-doi-list
---
items:
- - 10.1016/j.molcel.2019.12.009
- - 10.1016/j.molcel.2021.10.020
- - 10.1038/s41564-020-0777-y
- - 10.1038/s41586-019-1605-5
- - 10.1038/s41586-020-2719-5
+ - doi: 10.1016/j.molcel.2019.12.009
+ - doi: 10.1016/j.molcel.2021.10.020
+ - doi: 10.1038/s41564-020-0777-y
+ - doi: 10.1038/s41586-019-1605-5
+ - doi: 10.1038/s41586-020-2719-5
---
::
diff --git a/content/2.defense-systems/dartg.md b/content/2.defense-systems/dartg.md
index 2a21019e0e6e0245336f1cdf1be88a5166bc1e8b..5b45549d9ea1f2cdc9ac843364c3960d94c48f5b 100644
--- a/content/2.defense-systems/dartg.md
+++ b/content/2.defense-systems/dartg.md
@@ -33,7 +33,7 @@ A system from *Escherichia coli* in *Escherichia coli* has an anti-phage effect
::article-doi-list
---
items:
- - 10.1038/s41564-022-01153-5
+ - doi: 10.1038/s41564-022-01153-5
---
::
diff --git a/content/2.defense-systems/dazbog.md b/content/2.defense-systems/dazbog.md
index d59190384fd23208027ce329f761b9f265da9f05..d76dbf5d1758a3b1c4ac1d0dfe67026e8de146de 100644
--- a/content/2.defense-systems/dazbog.md
+++ b/content/2.defense-systems/dazbog.md
@@ -35,7 +35,7 @@ A system from *Bacillus cereus* in *Bacillus subtilis* has an anti-phage effect
::article-doi-list
---
items:
- - 10.1016/j.chom.2022.09.017
+ - doi: 10.1016/j.chom.2022.09.017
---
::
diff --git a/content/2.defense-systems/dctpdeaminase.md b/content/2.defense-systems/dctpdeaminase.md
index f9bdc9bd874b59c0f7e316eb3060e3e7fc4f7652..cd52ecd7ff2cbf7789399aa6e9f5f02ff0a5517b 100644
--- a/content/2.defense-systems/dctpdeaminase.md
+++ b/content/2.defense-systems/dctpdeaminase.md
@@ -51,8 +51,6 @@ Subsystem AvcID with a system from *Vibrio cholerae* in *Escherichia coli* has a
::article-doi-list
---
items:
- - 10.1038/s41564-022-01162-4
- - 10.1038/s41564-022-01162-4
-
+ - doi: 10.1038/s41564-022-01162-4
---
::
diff --git a/content/2.defense-systems/dgtpase.md b/content/2.defense-systems/dgtpase.md
index c09e3ba0fb0501bd19fc52afe92604bf05b1a176..66546b6a341974f7b48802e85a63879fc3c677eb 100644
--- a/content/2.defense-systems/dgtpase.md
+++ b/content/2.defense-systems/dgtpase.md
@@ -41,7 +41,7 @@ A system from *Shewanella putrefaciens* in *Escherichia coli* has an anti-phage
::article-doi-list
---
items:
- - 10.1038/s41564-022-01162-4
+ - doi: 10.1038/s41564-022-01162-4
---
::
diff --git a/content/2.defense-systems/disarm.md b/content/2.defense-systems/disarm.md
index c24239e86e28a415223ad95434814c3e81be535d..54bf34512be2700fc68d4cf83512a42430af3395 100644
--- a/content/2.defense-systems/disarm.md
+++ b/content/2.defense-systems/disarm.md
@@ -57,8 +57,8 @@ A system from *Serratia sp. SCBI* in *Escherichia coli* has an anti-phage effect
::article-doi-list
---
items:
- - 10.1038/s41467-022-30673-1
- - 10.1038/s41564-017-0051-0
+ - doi: 10.1038/s41467-022-30673-1
+ - doi: 10.1038/s41564-017-0051-0
---
::
diff --git a/content/2.defense-systems/dmdde.md b/content/2.defense-systems/dmdde.md
index 32f25ceeeeb31c6655b8d07b6090ec7beacdaa97..e4b676e97f3b585499c27f82958183a30c3a4d36 100644
--- a/content/2.defense-systems/dmdde.md
+++ b/content/2.defense-systems/dmdde.md
@@ -27,7 +27,7 @@ Among the 22k complete genomes of RefSeq, this system is present in 145 genomes
::article-doi-list
---
items:
- - 10.1038/s41586-022-04546-y
+ - doi: 10.1038/s41586-022-04546-y
---
::
diff --git a/content/2.defense-systems/dnd.md b/content/2.defense-systems/dnd.md
index 2464291e7fcce75e341e01ca2deee4e3e4f2b701..9d7a139aa2237a7d3f689cd1ebf10ddb4a7aa318 100644
--- a/content/2.defense-systems/dnd.md
+++ b/content/2.defense-systems/dnd.md
@@ -37,8 +37,8 @@ Subsystem DndCDEA-PbeABCD with a system from *Halalkalicoccus jeotgali* in *Natr
::article-doi-list
---
items:
- - 10.1038/nchembio.2007.39
- - 10.1038/s41467-019-09390-9
+ - doi: 10.1038/nchembio.2007.39
+ - doi: 10.1038/s41467-019-09390-9
---
::
diff --git a/content/2.defense-systems/dodola.md b/content/2.defense-systems/dodola.md
index d229b67c553f129c1d957069ff9cc2bb0bb5f538..f6eb30da0cdebe7dee4ae66d1105126d0c76c38c 100644
--- a/content/2.defense-systems/dodola.md
+++ b/content/2.defense-systems/dodola.md
@@ -33,7 +33,7 @@ A system from *Bacillus cereus* in *Bacillus subtilis* has an anti-phage effect
::article-doi-list
---
items:
- - 10.1016/j.chom.2022.09.017
+ - doi: 10.1016/j.chom.2022.09.017
---
::
diff --git a/content/2.defense-systems/dpd.md b/content/2.defense-systems/dpd.md
index 3bb832f2bcadd353a18bc6a6653ef1a98690d8dd..cd598667fda90add8525e86f5c614fd3ad9260c4 100644
--- a/content/2.defense-systems/dpd.md
+++ b/content/2.defense-systems/dpd.md
@@ -27,7 +27,7 @@ Among the 22k complete genomes of RefSeq, this system is present in 226 genomes
::article-doi-list
---
items:
- - 10.1073/pnas.1518570113
+ - doi: 10.1073/pnas.1518570113
---
::
diff --git a/content/2.defense-systems/drt.md b/content/2.defense-systems/drt.md
index 42c02922819b45f91c188872d6e1aad29a180d2c..4ca1ebb306862b9b0d7b0cb5888662151bff7946 100644
--- a/content/2.defense-systems/drt.md
+++ b/content/2.defense-systems/drt.md
@@ -75,8 +75,8 @@ Subsystem RT (UG28) (Type 9) with a system from *Escherichia coli* in *Escherich
::article-doi-list
---
items:
- - 10.1093/nar/gkac467
- - 10.1126/science.aba0372
+ - doi: 10.1093/nar/gkac467
+ - doi: 10.1126/science.aba0372
---
::
diff --git a/content/2.defense-systems/druantia.md b/content/2.defense-systems/druantia.md
index 384695803070101dd7ee0ba3c288e50219b73c17..901cc9d93b088d1c414dba1ff04be9bfc98f512c 100644
--- a/content/2.defense-systems/druantia.md
+++ b/content/2.defense-systems/druantia.md
@@ -41,7 +41,7 @@ A system from *Escherichia coli* in *Escherichia coli* has an anti-phage effect
::article-doi-list
---
items:
- - 10.1126/science.aar4120
+ - doi: 10.1126/science.aar4120
---
::
diff --git a/content/2.defense-systems/dsr.md b/content/2.defense-systems/dsr.md
index c22a192b874220ba1ab12f3235000e6a953e3b7e..b8294e7a7b1c300b54ed11367a083f1d85f0e2fb 100644
--- a/content/2.defense-systems/dsr.md
+++ b/content/2.defense-systems/dsr.md
@@ -43,8 +43,8 @@ Subsystem DSR1 with a system from *Bacillus subtilis* in *Bacillus subtilis * ha
::article-doi-list
---
items:
- - 10.1038/s41564-022-01207-8
- - 10.1126/science.aba0372
+ - doi: 10.1038/s41564-022-01207-8
+ - doi: 10.1126/science.aba0372
---
::
diff --git a/content/2.defense-systems/eleos.md b/content/2.defense-systems/eleos.md
index ab4a090cfb22c06e130c1fec320914770db0f6a0..c1664f0d25766a11811f233b048ccfdd1dfb8fa2 100644
--- a/content/2.defense-systems/eleos.md
+++ b/content/2.defense-systems/eleos.md
@@ -35,7 +35,7 @@ A system from *Bacillus vietnamensis* in *Bacillus subtilis* has an anti-phage e
::article-doi-list
---
items:
- - 10.1016/j.chom.2022.09.017
+ - doi: 10.1016/j.chom.2022.09.017
---
::
diff --git a/content/2.defense-systems/gabija.md b/content/2.defense-systems/gabija.md
index a17b54fb29e515bd4c8a50997726aa87b4d33561..ec4d44eec170e6c79a53d17b15241d4c2fa33b70 100644
--- a/content/2.defense-systems/gabija.md
+++ b/content/2.defense-systems/gabija.md
@@ -47,8 +47,8 @@ A system from *Bacillus cereus* in *Escherichia coli* has an anti-phage effect a
::article-doi-list
---
items:
- - 10.1093/nar/gkab277
- - 10.1126/science.aar4120
+ - doi: 10.1093/nar/gkab277
+ - doi: 10.1126/science.aar4120
---
::
diff --git a/content/2.defense-systems/gao_ape.md b/content/2.defense-systems/gao_ape.md
index 898c287ef9cbb28e1899344791605d1c4cbdf443..41e8bec7fff51c307c6abdfcfb2278530f578c59 100644
--- a/content/2.defense-systems/gao_ape.md
+++ b/content/2.defense-systems/gao_ape.md
@@ -33,7 +33,7 @@ A system from *Escherichia coli* in *Escherichia coli* has an anti-phage effect
::article-doi-list
---
items:
- - 10.1126/science.aba0372
+ - doi: 10.1126/science.aba0372
---
::
diff --git a/content/2.defense-systems/gao_her.md b/content/2.defense-systems/gao_her.md
index d85d02c6e45d47051c6e3982940592a6d7865e61..9c2c8906bc16bed72aff43ff79af2259495cda68 100644
--- a/content/2.defense-systems/gao_her.md
+++ b/content/2.defense-systems/gao_her.md
@@ -39,7 +39,7 @@ Subsystem DUF4297 + HerA with a system from *Escherichia coli* in *Escherichia c
::article-doi-list
---
items:
- - 10.1126/science.aba0372
+ - doi: 10.1126/science.aba0372
---
::
diff --git a/content/2.defense-systems/gao_hhe.md b/content/2.defense-systems/gao_hhe.md
index 819461fe7716161cd228a259077d81da99c80229..5773083c043814f7eeeb440ee89f2fe883b55790 100644
--- a/content/2.defense-systems/gao_hhe.md
+++ b/content/2.defense-systems/gao_hhe.md
@@ -33,7 +33,7 @@ A system from *Escherichia coli* in *Escherichia coli* has an anti-phage effect
::article-doi-list
---
items:
- - 10.1126/science.aba0372
+ - doi: 10.1126/science.aba0372
---
::
diff --git a/content/2.defense-systems/gao_iet.md b/content/2.defense-systems/gao_iet.md
index 6c1b81a95448d664ee9a38274336b38ff4c7b3e9..2fc12bc039c235895154536cc3f5132a7b929abb 100644
--- a/content/2.defense-systems/gao_iet.md
+++ b/content/2.defense-systems/gao_iet.md
@@ -33,7 +33,7 @@ A system from *Escherichia coli* in *Escherichia coli* has an anti-phage effect
::article-doi-list
---
items:
- - 10.1126/science.aba0372
+ - doi: 10.1126/science.aba0372
---
::
diff --git a/content/2.defense-systems/gao_mza.md b/content/2.defense-systems/gao_mza.md
index c616426d9c930dc718a81373a2afa9310188cce8..0bcc8a4b5ee9c89b27d7a8e3b9d6ad2fa2e25993 100644
--- a/content/2.defense-systems/gao_mza.md
+++ b/content/2.defense-systems/gao_mza.md
@@ -33,7 +33,7 @@ A system from *Salmonella enterica* in *Escherichia coli* has an anti-phage effe
::article-doi-list
---
items:
- - 10.1126/science.aba0372
+ - doi: 10.1126/science.aba0372
---
::
diff --git a/content/2.defense-systems/gao_ppl.md b/content/2.defense-systems/gao_ppl.md
index e79e284ea6601fb1b7966339343bdd2e06b7818c..a07510399d023930eb6376a27b17b86cc4a83540 100644
--- a/content/2.defense-systems/gao_ppl.md
+++ b/content/2.defense-systems/gao_ppl.md
@@ -33,7 +33,7 @@ A system from *Salmonella enterica* in *Escherichia coli* has an anti-phage effe
::article-doi-list
---
items:
- - 10.1126/science.aba0372
+ - doi: 10.1126/science.aba0372
---
::
diff --git a/content/2.defense-systems/gao_qat.md b/content/2.defense-systems/gao_qat.md
index 91b89e32d5b0521d8d3cf38debe2edf222d4ec8b..e9633099d1ce111f27dd6bc71a80712f61648a34 100644
--- a/content/2.defense-systems/gao_qat.md
+++ b/content/2.defense-systems/gao_qat.md
@@ -33,7 +33,7 @@ A system from *Escherichia coli* in *Escherichia coli* has an anti-phage effect
::article-doi-list
---
items:
- - 10.1126/science.aba0372
+ - doi: 10.1126/science.aba0372
---
::
diff --git a/content/2.defense-systems/gao_rl.md b/content/2.defense-systems/gao_rl.md
index 6de29d96a321f8d1688e88abbbe810c19f39b96f..92ba172f661179195f1dbbbbd6665449c88d4da5 100644
--- a/content/2.defense-systems/gao_rl.md
+++ b/content/2.defense-systems/gao_rl.md
@@ -33,7 +33,7 @@ A system from *Escherichia coli* in *Escherichia coli* has an anti-phage effect
::article-doi-list
---
items:
- - 10.1126/science.aba0372
+ - doi: 10.1126/science.aba0372
---
::
diff --git a/content/2.defense-systems/gao_tery.md b/content/2.defense-systems/gao_tery.md
index bd5bc3c4415b2871193322cbcdf5b67ca6e09010..aea8b0c378a954e12227bfb8301512d95ec0f088 100644
--- a/content/2.defense-systems/gao_tery.md
+++ b/content/2.defense-systems/gao_tery.md
@@ -33,7 +33,7 @@ A system from *Citrobacter gillenii* in *Escherichia coli* has an anti-phage eff
::article-doi-list
---
items:
- - 10.1126/science.aba0372
+ - doi: 10.1126/science.aba0372
---
::
diff --git a/content/2.defense-systems/gao_tmn.md b/content/2.defense-systems/gao_tmn.md
index 37f11421937dd2f80e269d7ae7670d967cb4c00d..e0fe7c80c990f2dbc0592c14aaec7ce020fa0101 100644
--- a/content/2.defense-systems/gao_tmn.md
+++ b/content/2.defense-systems/gao_tmn.md
@@ -33,7 +33,7 @@ A system from *Escherichia coli* in *Escherichia coli* has an anti-phage effect
::article-doi-list
---
items:
- - 10.1126/science.aba0372
+ - doi: 10.1126/science.aba0372
---
::
diff --git a/content/2.defense-systems/gao_upx.md b/content/2.defense-systems/gao_upx.md
index 2bf2a707c8392051604734fc405432bb7a2323e6..ab9645b3cfb6378b634b28a85820544bbb5fc2da 100644
--- a/content/2.defense-systems/gao_upx.md
+++ b/content/2.defense-systems/gao_upx.md
@@ -33,7 +33,7 @@ A system from *Escherichia coli* in *Escherichia coli* has an anti-phage effect
::article-doi-list
---
items:
- - 10.1126/science.aba0372
+ - doi: 10.1126/science.aba0372
---
::
diff --git a/content/2.defense-systems/gasdermin.md b/content/2.defense-systems/gasdermin.md
index af871940614406f98deae7a77109ab1fe378b137..38046e6409c3d0391786b784524d29850e4041ba 100644
--- a/content/2.defense-systems/gasdermin.md
+++ b/content/2.defense-systems/gasdermin.md
@@ -33,7 +33,7 @@ A system from *Lysobacter enzymogenes* in *Escherichia coli* has an anti-phage e
::article-doi-list
---
items:
- - 10.1126/science.abj8432
+ - doi: 10.1126/science.abj8432
---
::
diff --git a/content/2.defense-systems/gp29_gp30.md b/content/2.defense-systems/gp29_gp30.md
index 76d0b3f9ce38fe479bcf87db922d3b0f58ee17b4..f75f51a2d09ee06b520a00f1b1518b5c1fa6c81c 100644
--- a/content/2.defense-systems/gp29_gp30.md
+++ b/content/2.defense-systems/gp29_gp30.md
@@ -27,7 +27,7 @@ Among the 22k complete genomes of RefSeq, this system is present in 314 genomes
::article-doi-list
---
items:
- - 10.1038/nmicrobiol.2016.251
+ - doi: 10.1038/nmicrobiol.2016.251
---
::
diff --git a/content/2.defense-systems/hachiman.md b/content/2.defense-systems/hachiman.md
index 82f056a2c32919af467c065eb058f703b2dec88b..79867502662882a52dca777d951e7f47ce795993 100644
--- a/content/2.defense-systems/hachiman.md
+++ b/content/2.defense-systems/hachiman.md
@@ -41,7 +41,7 @@ Subsystem Hachiman Type II with a system from *Sphingopyxis witflariensis* in *E
::article-doi-list
---
items:
- - 10.1126/science.aar4120
+ - doi: 10.1126/science.aar4120
---
::
diff --git a/content/2.defense-systems/isg15-like.md b/content/2.defense-systems/isg15-like.md
index 2339fc1aeb607d7209d16a8bb5e3ecb2cefa51c6..7d4789da4694e74b9188d8c7cde43c9c2abdf619 100644
--- a/content/2.defense-systems/isg15-like.md
+++ b/content/2.defense-systems/isg15-like.md
@@ -41,7 +41,7 @@ A system from *Thiomonas sp. FB-6* in *Escherichia coli* has an anti-phage effec
::article-doi-list
---
items:
- - 10.1016/j.chom.2022.09.017
+ - doi: 10.1016/j.chom.2022.09.017
---
::
diff --git a/content/2.defense-systems/kiwa.md b/content/2.defense-systems/kiwa.md
index 666f6d7f65be129180470c1fe27b47e5ea60831a..6f77579d4625c2d89f4e9c8d284d1086683b4b17 100644
--- a/content/2.defense-systems/kiwa.md
+++ b/content/2.defense-systems/kiwa.md
@@ -33,7 +33,7 @@ A system from *Escherichia coli* in *Escherichia coli* has an anti-phage effect
::article-doi-list
---
items:
- - 10.1126/science.aar4120
+ - doi: 10.1126/science.aar4120
---
::
diff --git a/content/2.defense-systems/lamassu-fam.md b/content/2.defense-systems/lamassu-fam.md
index 0300d0923ac357e7f4000c1c642cbcd8623ba8ec..c7ef58acfd09268ad1e4e46b42dded866dd7c3d3 100644
--- a/content/2.defense-systems/lamassu-fam.md
+++ b/content/2.defense-systems/lamassu-fam.md
@@ -102,9 +102,9 @@ Subsystem DdmABC with a system from *Vibrio cholerae* in *Escherichia coli* has
::article-doi-list
---
items:
- - 10.1016/j.chom.2022.09.017
- - 10.1038/s41586-022-04546-y
- - 10.1126/science.aar4120
+ - doi: 10.1016/j.chom.2022.09.017
+ - doi: 10.1038/s41586-022-04546-y
+ - doi: 10.1126/science.aar4120
---
::
diff --git a/content/2.defense-systems/lit.md b/content/2.defense-systems/lit.md
index 4c83992b8084f8873a0caf87f4749f9e5318290f..d103914badf5f106ac90551552081fc459799ade 100644
--- a/content/2.defense-systems/lit.md
+++ b/content/2.defense-systems/lit.md
@@ -33,9 +33,9 @@ A system from *Escherichia coli defective prophage e14* in *Escherichia coli* ha
::article-doi-list
---
items:
- - 10.1073/pnas.91.2.802
- - 10.1074/jbc.M002546200
- - 10.1186/1743-422X-7-360
+ - doi: 10.1073/pnas.91.2.802
+ - doi: 10.1074/jbc.M002546200
+ - doi: 10.1186/1743-422X-7-360
---
::
diff --git a/content/2.defense-systems/menshen.md b/content/2.defense-systems/menshen.md
index 5e42cc10ce6ec2d86703ae702e869ca0f4c3cbd4..e904100100d105ca035b74ca3a023c31fcab87dc 100644
--- a/content/2.defense-systems/menshen.md
+++ b/content/2.defense-systems/menshen.md
@@ -35,7 +35,7 @@ A system from *Solibacillus silvestris* in *Bacillus subtilis* has an anti-phage
::article-doi-list
---
items:
- - 10.1016/j.chom.2022.09.017
+ - doi: 10.1016/j.chom.2022.09.017
---
::
diff --git a/content/2.defense-systems/mok_hok_sok.md b/content/2.defense-systems/mok_hok_sok.md
index f2252462ae3e31a7ecc0252cc22b6fec1531de45..b87ea0cb4e17db8fdb0afc884dd6027012d06a6a 100644
--- a/content/2.defense-systems/mok_hok_sok.md
+++ b/content/2.defense-systems/mok_hok_sok.md
@@ -33,7 +33,7 @@ A system from *R1 plasmid of Salmonella paratyphi* in *Escherichia coli* has an
::article-doi-list
---
items:
- - 10.1128/jb.178.7.2044-2050.1996
+ - doi: 10.1128/jb.178.7.2044-2050.1996
---
::
diff --git a/content/2.defense-systems/mokosh.md b/content/2.defense-systems/mokosh.md
index f12dee44ca638125e191710c8daf30be65bb7d78..7fc1a69cdc4c3072a9b03e05d5b172b6cadf20ab 100644
--- a/content/2.defense-systems/mokosh.md
+++ b/content/2.defense-systems/mokosh.md
@@ -39,7 +39,7 @@ Subsystem Type II with a system from *Escherichia coli* in *Escherichia coli* ha
::article-doi-list
---
items:
- - 10.1016/j.chom.2022.09.017
+ - doi: 10.1016/j.chom.2022.09.017
---
::
diff --git a/content/2.defense-systems/nhi.md b/content/2.defense-systems/nhi.md
index ba9bb8bd9be26a57a37afb4459e6367758fb071c..884324a8d5e1f32e10b2602980bb6d396021458d 100644
--- a/content/2.defense-systems/nhi.md
+++ b/content/2.defense-systems/nhi.md
@@ -41,7 +41,7 @@ A system from *Vibrio vulnificus* in *Staphylococcus aureus* has an anti-phage e
::article-doi-list
---
items:
- - 10.1016/j.chom.2022.03.001
+ - doi: 10.1016/j.chom.2022.03.001
---
::
diff --git a/content/2.defense-systems/nixi.md b/content/2.defense-systems/nixi.md
index c3278deb29d68d3be61cd69d5470246983170c3a..a8b8e6db84d283d5c18c677635565e449c384735 100644
--- a/content/2.defense-systems/nixi.md
+++ b/content/2.defense-systems/nixi.md
@@ -33,7 +33,7 @@ A system from *Vibrio cholerae* in *Vibrio cholerae* has an anti-phage effect ag
::article-doi-list
---
items:
- - 10.1101/2021.07.12.452122
+ - doi: 10.1101/2021.07.12.452122
---
::
diff --git a/content/2.defense-systems/nlr.md b/content/2.defense-systems/nlr.md
index 65863ccd58bf769540a2e0703c4819ec5d1644bd..b3102c934bbe46c6cb1749d6fe7bb413fdd9057b 100644
--- a/content/2.defense-systems/nlr.md
+++ b/content/2.defense-systems/nlr.md
@@ -53,7 +53,7 @@ Subsystem bNACHT09 with a system from *Escherichia coli* in *Escherichia coli* h
::article-doi-list
---
items:
- - 10.1101/2022.07.19.500537
+ - doi: 10.1101/2022.07.19.500537
---
::
diff --git a/content/2.defense-systems/old/abia.md b/content/2.defense-systems/old/abia.md
index ea5fc81f4dd62e55d6c94e9568a3e85f34126888..c56ceafe0c776277a7c0c0640fb6bed016d6a713 100644
--- a/content/2.defense-systems/old/abia.md
+++ b/content/2.defense-systems/old/abia.md
@@ -36,13 +36,13 @@ A system from *lactococcal plasmid* in *lactococci* has an anti-phage effect aga
::article-doi-list
---
items:
- - 10.1016/j.mib.2005.06.006
- - 10.1023/A:1002027321171
- - 10.1093/nar/gkac467
+ - doi: 10.1016/j.mib.2005.06.006
+ - doi: 10.1023/A:1002027321171
+ - doi: 10.1093/nar/gkac467
---
::
-<!-- 10.1016/j.mib.2005.06.006 -->
+<!-- doi: 10.1016/j.mib.2005.06.006 -->
**Chopin, M.-C., Chopin, A. & Bidnenko, E. Phage abortive infection in lactococci: variations on a theme. Curr Opin Microbiol 8, 473-479 (2005).**
Abortive infection (Abi) systems, also called phage exclusion, block phage multiplication and cause premature bacterial cell death upon phage infection. This decreases the number of progeny particles and limits their spread to other cells allowing the bacterial population to survive. Twenty Abi systems have been isolated in Lactococcus lactis, a bacterium used in cheese-making fermentation processes, where phage attacks are of economical importance. Recent insights in their expression and mode of action indicate that, behind diverse phenotypic and molecular effects, lactococcal Abis share common traits with the well-studied Escherichia coli systems Lit and Prr. Abis are widespread in bacteria, and recent analysis indicates that Abis might have additional roles other than conferring phage resistance.
diff --git a/content/2.defense-systems/old/avast.md b/content/2.defense-systems/old/avast.md
index 7909a710c29fc096b4daeaef7d483e34df426a66..ee472b1412d1a9c73c07db4885ce627cf5927a10 100644
--- a/content/2.defense-systems/old/avast.md
+++ b/content/2.defense-systems/old/avast.md
@@ -97,7 +97,7 @@ Subsystem CcAvs4 with a system from *Corallococcus coralloides* in *Escherichia
::article-doi-list
---
items:
- - 10.1126/science.abm4096
- - 10.1126/science.aba0372
+ - doi: 10.1126/science.abm4096
+ - doi: 10.1126/science.aba0372
---
::
\ No newline at end of file
diff --git a/content/2.defense-systems/old/paris.md b/content/2.defense-systems/old/paris.md
index 7f57f0478a78ca15e4de2e282d67ffe421bbd86c..eb31bf0e54e2f286b273fbf8a4e286223a483407 100644
--- a/content/2.defense-systems/old/paris.md
+++ b/content/2.defense-systems/old/paris.md
@@ -53,8 +53,8 @@ Paris type II merge system in _Desulfovibrio desulfuricans_ (GCF\__000025705.1).
::article-doi-list
---
items:
- - 10.1101/2021.01.21.427644
- - 10.1093/nar/gkaa290
- - 10.1016/0022-2836(75)90083-2
+ - doi: 10.1101/2021.01.21.427644
+ - doi: 10.1093/nar/gkaa290
+ - doi: 10.1016/0022-2836(75)90083-2
---
::
\ No newline at end of file
diff --git a/content/2.defense-systems/olokun.md b/content/2.defense-systems/olokun.md
index 5666fa4f5ab8a2d4dae3219979a421f9761d8e10..4a8cd69a6ed6f975fb557c6cb34ffdf4d3ddaecc 100644
--- a/content/2.defense-systems/olokun.md
+++ b/content/2.defense-systems/olokun.md
@@ -33,7 +33,7 @@ A system from *Escherichia coli* in *Escherichia coli* has an anti-phage effect
::article-doi-list
---
items:
- - 10.1016/j.chom.2022.09.017
+ - doi: 10.1016/j.chom.2022.09.017
---
::
diff --git a/content/2.defense-systems/pago.md b/content/2.defense-systems/pago.md
index d8f63877200c77a0d8ae425bc357cd68439a6420..fde9b1235730add14413de5f760004683e7784ff 100644
--- a/content/2.defense-systems/pago.md
+++ b/content/2.defense-systems/pago.md
@@ -49,12 +49,12 @@ Subsystem SiAgo/Aga1/Aga2 with a system from *Sulfolobus islandicus* in *Sulfolo
::article-doi-list
---
items:
- - 10.1016/j.cell.2022.03.012
- - 10.1016/j.chom.2022.04.015
- - 10.1038/s41564-022-01207-8
- - 10.1038/s41586-020-2605-1
- - 10.1186/1745-6150-4-29
- - 10.1038/s41564-022-01239-0
+ - doi: 10.1016/j.cell.2022.03.012
+ - doi: 10.1016/j.chom.2022.04.015
+ - doi: 10.1038/s41564-022-01207-8
+ - doi: 10.1038/s41586-020-2605-1
+ - doi: 10.1186/1745-6150-4-29
+ - doi: 10.1038/s41564-022-01239-0
---
::
diff --git a/content/2.defense-systems/pd-lambda-1.md b/content/2.defense-systems/pd-lambda-1.md
index 571ee3d71e4ab559d14dd93d124042999ea80504..db4f0937c932fd81e32a6bbd5c52f0be45f364b2 100644
--- a/content/2.defense-systems/pd-lambda-1.md
+++ b/content/2.defense-systems/pd-lambda-1.md
@@ -33,7 +33,7 @@ A system from *Escherichia coli* in *Escherichia coli* has an anti-phage effect
::article-doi-list
---
items:
- - 10.1038/s41564-022-01219-4
+ - doi: 10.1038/s41564-022-01219-4
---
::
diff --git a/content/2.defense-systems/pd-lambda-2.md b/content/2.defense-systems/pd-lambda-2.md
index bc411f6688a4d8440e24a8d0a60120bd29872fa9..a8316a74affbf71a0bdc44c52f663220542c5eb6 100644
--- a/content/2.defense-systems/pd-lambda-2.md
+++ b/content/2.defense-systems/pd-lambda-2.md
@@ -33,7 +33,7 @@ A system from *Escherichia coli* in *Escherichia coli* has an anti-phage effect
::article-doi-list
---
items:
- - 10.1038/s41564-022-01219-4
+ - doi: 10.1038/s41564-022-01219-4
---
::
diff --git a/content/2.defense-systems/pd-lambda-3.md b/content/2.defense-systems/pd-lambda-3.md
index d0f21b11209e7fb955def9fe3ed536bb5c724305..191f15c6eb29778440cbe31ca8a8c25e3beb2a4c 100644
--- a/content/2.defense-systems/pd-lambda-3.md
+++ b/content/2.defense-systems/pd-lambda-3.md
@@ -33,7 +33,7 @@ A system from *Escherichia coli* in *Escherichia coli* has an anti-phage effect
::article-doi-list
---
items:
- - 10.1038/s41564-022-01219-4
+ - doi: 10.1038/s41564-022-01219-4
---
::
diff --git a/content/2.defense-systems/pd-lambda-4.md b/content/2.defense-systems/pd-lambda-4.md
index bbcbacb41185e06a46bc0a96406631ed91065c38..c05e95f7d1774e4c9eed1fe82e51df1222679020 100644
--- a/content/2.defense-systems/pd-lambda-4.md
+++ b/content/2.defense-systems/pd-lambda-4.md
@@ -33,7 +33,7 @@ A system from *Escherichia coli* in *Escherichia coli* has an anti-phage effect
::article-doi-list
---
items:
- - 10.1038/s41564-022-01219-4
+ - doi: 10.1038/s41564-022-01219-4
---
::
diff --git a/content/2.defense-systems/pd-lambda-5.md b/content/2.defense-systems/pd-lambda-5.md
index d6b6524963964083107eb0c20cddb0f2ece37306..949f461b0190b0be52bd08551844f9f7bfc4fc86 100644
--- a/content/2.defense-systems/pd-lambda-5.md
+++ b/content/2.defense-systems/pd-lambda-5.md
@@ -33,7 +33,7 @@ A system from *Escherichia coli* in *Escherichia coli* has an anti-phage effect
::article-doi-list
---
items:
- - 10.1038/s41564-022-01219-4
+ - doi: 10.1038/s41564-022-01219-4
---
::
diff --git a/content/2.defense-systems/pd-lambda-6.md b/content/2.defense-systems/pd-lambda-6.md
index 4a1236edcf6b40fd751f53dd2ed9d84a9d8f753b..1c4c22720b7c938b61ea7f06ad06fbc5357aef4e 100644
--- a/content/2.defense-systems/pd-lambda-6.md
+++ b/content/2.defense-systems/pd-lambda-6.md
@@ -33,7 +33,7 @@ A system from *Escherichia coli* in *Escherichia coli* has an anti-phage effect
::article-doi-list
---
items:
- - 10.1038/s41564-022-01219-4
+ - doi: 10.1038/s41564-022-01219-4
---
::
diff --git a/content/2.defense-systems/pd-t4-1.md b/content/2.defense-systems/pd-t4-1.md
index 0763a2cfbf0d7a174651b65be400aef5f8c4b99d..bf38ceee698240b2eb4eb222a088b658ef0c8a2b 100644
--- a/content/2.defense-systems/pd-t4-1.md
+++ b/content/2.defense-systems/pd-t4-1.md
@@ -33,7 +33,7 @@ A system from *Escherichia coli* in *Escherichia coli* has an anti-phage effect
::article-doi-list
---
items:
- - 10.1371/journal.pgen.1010065
+ - doi: 10.1371/journal.pgen.1010065
---
::
diff --git a/content/2.defense-systems/pd-t4-10.md b/content/2.defense-systems/pd-t4-10.md
index f0a38fec5c9fbd237cccd09b9eec7292d177c772..cf7a258f070f404242e906ef4cedd55592f32eea 100644
--- a/content/2.defense-systems/pd-t4-10.md
+++ b/content/2.defense-systems/pd-t4-10.md
@@ -33,7 +33,7 @@ A system from *Escherichia coli* in *Escherichia coli* has an anti-phage effect
::article-doi-list
---
items:
- - 10.1371/journal.pgen.1010065
+ - doi: 10.1371/journal.pgen.1010065
---
::
diff --git a/content/2.defense-systems/pd-t4-2.md b/content/2.defense-systems/pd-t4-2.md
index 52d9c9cc41daec69f8ca780b6b6b6123efe5ebf9..8a17374ec5a181b7408b5ba62ee9f1caeaed095c 100644
--- a/content/2.defense-systems/pd-t4-2.md
+++ b/content/2.defense-systems/pd-t4-2.md
@@ -33,7 +33,7 @@ A system from *Escherichia coli* in *Escherichia coli* has an anti-phage effect
::article-doi-list
---
items:
- - 10.1038/s41564-022-01219-4
+ - doi: 10.1038/s41564-022-01219-4
---
::
diff --git a/content/2.defense-systems/pd-t4-3.md b/content/2.defense-systems/pd-t4-3.md
index 2960a39e266504f145ccf2a5ec36eb5a1a93794d..9339d524a3cee996fa927647927ccb57f43e048f 100644
--- a/content/2.defense-systems/pd-t4-3.md
+++ b/content/2.defense-systems/pd-t4-3.md
@@ -33,7 +33,7 @@ A system from *Escherichia coli* in *Escherichia coli* has an anti-phage effect
::article-doi-list
---
items:
- - 10.1038/s41564-022-01219-4
+ - doi: 10.1038/s41564-022-01219-4
---
::
diff --git a/content/2.defense-systems/pd-t4-4.md b/content/2.defense-systems/pd-t4-4.md
index 72f7e98227e9d2629a63218746084fd94e363df2..bb8ccc813a0b1bca32f416592cabcf4f5abc291f 100644
--- a/content/2.defense-systems/pd-t4-4.md
+++ b/content/2.defense-systems/pd-t4-4.md
@@ -33,7 +33,7 @@ A system from *Escherichia coli* in *Escherichia coli* has an anti-phage effect
::article-doi-list
---
items:
- - 10.1038/s41564-022-01219-4
+ - doi: 10.1038/s41564-022-01219-4
---
::
diff --git a/content/2.defense-systems/pd-t4-5.md b/content/2.defense-systems/pd-t4-5.md
index 7850e3fa10babf8909188893126bcb31b86fb641..99a129137e05c6c0f137bc59e2d0e119519d2699 100644
--- a/content/2.defense-systems/pd-t4-5.md
+++ b/content/2.defense-systems/pd-t4-5.md
@@ -33,7 +33,7 @@ A system from *Escherichia coli* in *Escherichia coli* has an anti-phage effect
::article-doi-list
---
items:
- - 10.1038/s41564-022-01219-4
+ - doi: 10.1038/s41564-022-01219-4
---
::
diff --git a/content/2.defense-systems/pd-t4-6.md b/content/2.defense-systems/pd-t4-6.md
index 11eb6d31a36e08b7b5b450d30d10f55f2adb1aa3..5091f597c4950f461eace8dfdd3e164d8e5054e4 100644
--- a/content/2.defense-systems/pd-t4-6.md
+++ b/content/2.defense-systems/pd-t4-6.md
@@ -33,7 +33,7 @@ A system from *Escherichia coli* in *Escherichia coli* has an anti-phage effect
::article-doi-list
---
items:
- - 10.1038/s41564-022-01219-4
+ - doi: 10.1038/s41564-022-01219-4
---
::
diff --git a/content/2.defense-systems/pd-t4-7.md b/content/2.defense-systems/pd-t4-7.md
index 4a83401af615954f7e729442d1d212289736af8a..93829d7878bab118365ae1b17419d3d3393ba2c6 100644
--- a/content/2.defense-systems/pd-t4-7.md
+++ b/content/2.defense-systems/pd-t4-7.md
@@ -33,7 +33,7 @@ A system from *Escherichia coli* in *Escherichia coli* has an anti-phage effect
::article-doi-list
---
items:
- - 10.1038/s41564-022-01219-4
+ - doi: 10.1038/s41564-022-01219-4
---
::
diff --git a/content/2.defense-systems/pd-t4-8.md b/content/2.defense-systems/pd-t4-8.md
index a6506dbb3231716c82c7ca3f7444031d143fea43..6fbc3400ab12c5cdb514727cacbb62fbfc22cd72 100644
--- a/content/2.defense-systems/pd-t4-8.md
+++ b/content/2.defense-systems/pd-t4-8.md
@@ -33,7 +33,7 @@ A system from *Escherichia coli* in *Escherichia coli* has an anti-phage effect
::article-doi-list
---
items:
- - 10.1038/s41564-022-01219-4
+ - doi: 10.1038/s41564-022-01219-4
---
::
diff --git a/content/2.defense-systems/pd-t4-9.md b/content/2.defense-systems/pd-t4-9.md
index aa720c314c2c90d1257c0ce36732eee8d2283664..fe9b8f669480c1b28790ad73d279288b193f239c 100644
--- a/content/2.defense-systems/pd-t4-9.md
+++ b/content/2.defense-systems/pd-t4-9.md
@@ -33,7 +33,7 @@ A system from *Escherichia coli* in *Escherichia coli* has an anti-phage effect
::article-doi-list
---
items:
- - 10.1038/s41564-022-01219-4
+ - doi: 10.1038/s41564-022-01219-4
---
::
diff --git a/content/2.defense-systems/pd-t7-1.md b/content/2.defense-systems/pd-t7-1.md
index e57a9d3d9830da951772d5afca8347f8b11a8827..cbb34acfadee4199b4962c96b6bf8e1becba80f3 100644
--- a/content/2.defense-systems/pd-t7-1.md
+++ b/content/2.defense-systems/pd-t7-1.md
@@ -33,7 +33,7 @@ A system from *Escherichia coli* in *Escherichia coli* has an anti-phage effect
::article-doi-list
---
items:
- - 10.1038/s41564-022-01219-4
+ - doi: 10.1038/s41564-022-01219-4
---
::
diff --git a/content/2.defense-systems/pd-t7-2.md b/content/2.defense-systems/pd-t7-2.md
index dba107acf8b15f71ff95fdf52dd47a049fbfb4bd..4027829eec055cb668ee5b0116e6f4839591d03a 100644
--- a/content/2.defense-systems/pd-t7-2.md
+++ b/content/2.defense-systems/pd-t7-2.md
@@ -33,7 +33,7 @@ A system from *Escherichia coli* in *Escherichia coli* has an anti-phage effect
::article-doi-list
---
items:
- - 10.1038/s41564-022-01219-4
+ - doi: 10.1038/s41564-022-01219-4
---
::
diff --git a/content/2.defense-systems/pd-t7-3.md b/content/2.defense-systems/pd-t7-3.md
index f09d0871f10d8c13d3781e22cc32cae20882fd8f..7ff84cc318fc6504f28e3fadfaf0925470d1113c 100644
--- a/content/2.defense-systems/pd-t7-3.md
+++ b/content/2.defense-systems/pd-t7-3.md
@@ -33,7 +33,7 @@ A system from *Escherichia coli* in *Escherichia coli* has an anti-phage effect
::article-doi-list
---
items:
- - 10.1038/s41564-022-01219-4
+ - doi: 10.1038/s41564-022-01219-4
---
::
diff --git a/content/2.defense-systems/pd-t7-4.md b/content/2.defense-systems/pd-t7-4.md
index 6f9e4da3171a08956bbdf1c08f06426977a45a30..d817d2d4fb04126721159a55315522129e0ac31f 100644
--- a/content/2.defense-systems/pd-t7-4.md
+++ b/content/2.defense-systems/pd-t7-4.md
@@ -33,7 +33,7 @@ A system from *Escherichia coli* in *Escherichia coli* has an anti-phage effect
::article-doi-list
---
items:
- - 10.1038/s41564-022-01219-4
+ - doi: 10.1038/s41564-022-01219-4
---
::
diff --git a/content/2.defense-systems/pd-t7-5.md b/content/2.defense-systems/pd-t7-5.md
index 376998c0f8de5c042ddb5935abf5dad73259174b..28277c7ea86ee945d0df0f08f24625ca0d611956 100644
--- a/content/2.defense-systems/pd-t7-5.md
+++ b/content/2.defense-systems/pd-t7-5.md
@@ -33,7 +33,7 @@ A system from *Escherichia coli* in *Escherichia coli* has an anti-phage effect
::article-doi-list
---
items:
- - 10.1038/s41564-022-01219-4
+ - doi: 10.1038/s41564-022-01219-4
---
::
diff --git a/content/2.defense-systems/pfiat.md b/content/2.defense-systems/pfiat.md
index 9968f6e4095a5dc0c81ae66b373adbb1b61fd0e7..f9911b0a60853dc9200fb33c97c9d3104feb554c 100644
--- a/content/2.defense-systems/pfiat.md
+++ b/content/2.defense-systems/pfiat.md
@@ -27,7 +27,7 @@ Among the 22k complete genomes of RefSeq, this system is present in 819 genomes
::article-doi-list
---
items:
- - 10.1111/1751-7915.13570
+ - doi: 10.1111/1751-7915.13570
---
::
diff --git a/content/2.defense-systems/pif.md b/content/2.defense-systems/pif.md
index 81f9d1e6a0d0256d3d08b3a4d36a00171a23507c..ac07e1a2f9432816c7eb4cc936f6d2a302005050 100644
--- a/content/2.defense-systems/pif.md
+++ b/content/2.defense-systems/pif.md
@@ -33,9 +33,9 @@ A system from *Escherichia coli F-plasmid* in *Escherichia coli* has an anti-pha
::article-doi-list
---
items:
- - 10.1007/BF00327934
- - 10.1016/j.virol.2004.06.001
- - 10.1128/jb.173.20.6507-6514.1991
+ - doi: 10.1007/BF00327934
+ - doi: 10.1016/j.virol.2004.06.001
+ - doi: 10.1128/jb.173.20.6507-6514.1991
---
::
diff --git a/content/2.defense-systems/prrc.md b/content/2.defense-systems/prrc.md
index 83846dcfd88e3403af4fbf620a5f3b2de0552f50..a83866c3eb013ddbf722e98effeb7d9e0d276e16 100644
--- a/content/2.defense-systems/prrc.md
+++ b/content/2.defense-systems/prrc.md
@@ -33,8 +33,8 @@ A system from *Escherichia coli* in *Escherichia coli* has an anti-phage effect
::article-doi-list
---
items:
- - 10.1006/jmbi.1995.0343
- - 10.1186/1743-422X-7-360
+ - doi: 10.1006/jmbi.1995.0343
+ - doi: 10.1186/1743-422X-7-360
---
::
diff --git a/content/2.defense-systems/psyrta.md b/content/2.defense-systems/psyrta.md
index 1d8a642917c90957f559ace5c1e08fa551d346e4..e1d7ae9f10c29e6e4f2d88f7fcc653e0923a0fd7 100644
--- a/content/2.defense-systems/psyrta.md
+++ b/content/2.defense-systems/psyrta.md
@@ -33,8 +33,8 @@ A system from *Bacillus sp. FJAT-29814* in *Escherichia coli* has an anti-phage
::article-doi-list
---
items:
- - 10.1016/j.chom.2022.09.017
- - 10.1016/j.molcel.2013.02.002
+ - doi: 10.1016/j.chom.2022.09.017
+ - doi: 10.1016/j.molcel.2013.02.002
---
::
diff --git a/content/2.defense-systems/pycsar.md b/content/2.defense-systems/pycsar.md
index 29f61ad8cd082c1bd31d1b4f01a73e47a96ada56..a8b5ef7a1044446a9ae147b760c8a5289d50f15c 100644
--- a/content/2.defense-systems/pycsar.md
+++ b/content/2.defense-systems/pycsar.md
@@ -35,7 +35,7 @@ A system from *Xanthomonas perforans* in *Escherichia coli* has an anti-phage ef
::article-doi-list
---
items:
- - 10.1016/j.cell.2021.09.031
+ - doi: 10.1016/j.cell.2021.09.031
---
::
diff --git a/content/2.defense-systems/radar.md b/content/2.defense-systems/radar.md
index 49a4645c8db8f2cb26010b47c7c2229c77be37fd..aaf9a41d18ad6e4fff9f69d878f00f1ad4de4154 100644
--- a/content/2.defense-systems/radar.md
+++ b/content/2.defense-systems/radar.md
@@ -50,7 +50,7 @@ A system from *Streptococcus suis* in *Escherichia coli* has an anti-phage effec
::article-doi-list
---
items:
- - 10.1126/science.aba0372
+ - doi: 10.1126/science.aba0372
---
::
diff --git a/content/2.defense-systems/retron.md b/content/2.defense-systems/retron.md
index e53f9f4fc899736379f9d4666c35ec29fd80ab7d..ac65d092447e95306672f9f1ff454509c531d46f 100644
--- a/content/2.defense-systems/retron.md
+++ b/content/2.defense-systems/retron.md
@@ -135,8 +135,8 @@ Subsystem Retron-Eco1 with a system from *Escherichia coli* in *Escherichia coli
::article-doi-list
---
items:
- - 10.1016/j.cell.2020.09.065
- - 10.1093/nar/gkaa1149
+ - doi: 10.1016/j.cell.2020.09.065
+ - doi: 10.1093/nar/gkaa1149
---
::
diff --git a/content/2.defense-systems/rexab.md b/content/2.defense-systems/rexab.md
index 5108628d3770407a2ff9beda0d4aae46f4c35fb6..bad9e0750852d99e27e4ad13e274161dace218d0 100644
--- a/content/2.defense-systems/rexab.md
+++ b/content/2.defense-systems/rexab.md
@@ -33,7 +33,7 @@ A system from *Escherichia coli lambda prophage* in *Escherichia coli* has an an
::article-doi-list
---
items:
- - 10.1101/gad.6.3.497
+ - doi: 10.1101/gad.6.3.497
---
::
diff --git a/content/2.defense-systems/rloc.md b/content/2.defense-systems/rloc.md
index 2f548f126e443200ee89b9c1a7aabfa0ddcd9944..07f8cf12182b588ba5ef3109b87c0aca818a00f5 100644
--- a/content/2.defense-systems/rloc.md
+++ b/content/2.defense-systems/rloc.md
@@ -33,8 +33,8 @@ A system from *Escherichia coli* in *Escherichia coli* has an anti-phage effect
::article-doi-list
---
items:
- - 10.1111/j.1365-2958.2008.06387.x
- - 10.1111/mmi.13074
+ - doi: 10.1111/j.1365-2958.2008.06387.x
+ - doi: 10.1111/mmi.13074
---
::
diff --git a/content/2.defense-systems/rm.md b/content/2.defense-systems/rm.md
index 9e7048f37d72658acc1d60a4d78f2fe78e479948..159025d86cce23b9711d39b5614bef77019340a8 100644
--- a/content/2.defense-systems/rm.md
+++ b/content/2.defense-systems/rm.md
@@ -43,7 +43,7 @@ Among the 22k complete genomes of RefSeq, this system is present in 19087 genome
::article-doi-list
---
items:
- - 10.1093/nar/gku734
+ - doi: 10.1093/nar/gku734
---
::
diff --git a/content/2.defense-systems/rnlab.md b/content/2.defense-systems/rnlab.md
index 81b1932f4521ba93782c532eb5806d21f1b7dcdb..fd84aa595b8df79610af2b33f165b02c2f51a23f 100644
--- a/content/2.defense-systems/rnlab.md
+++ b/content/2.defense-systems/rnlab.md
@@ -33,7 +33,7 @@ A system from *Escherichia coli* in *Escherichia coli* has an anti-phage effect
::article-doi-list
---
items:
- - 10.1534/genetics.110.121798
+ - doi: 10.1534/genetics.110.121798
---
::
diff --git a/content/2.defense-systems/rosmerta.md b/content/2.defense-systems/rosmerta.md
index 1b0be240f44d959884782c8f383f80afffb934e3..24b7269894c1d76635d754e76f901ef60b94ed72 100644
--- a/content/2.defense-systems/rosmerta.md
+++ b/content/2.defense-systems/rosmerta.md
@@ -33,7 +33,7 @@ A system from *Escherichia coli* in *Escherichia coli* has an anti-phage effect
::article-doi-list
---
items:
- - 10.1016/j.chom.2022.09.017
+ - doi: 10.1016/j.chom.2022.09.017
---
::
diff --git a/content/2.defense-systems/rst_2tm_1tm_tir.md b/content/2.defense-systems/rst_2tm_1tm_tir.md
index 2be6806ad7f1b91892422d2ffd51d5f708737c4d..3ada54e81e02fc708e7c6dd94509d537da6cd314 100644
--- a/content/2.defense-systems/rst_2tm_1tm_tir.md
+++ b/content/2.defense-systems/rst_2tm_1tm_tir.md
@@ -27,7 +27,7 @@ Among the 22k complete genomes of RefSeq, this system is present in 2 genomes (0
::article-doi-list
---
items:
- - 10.1016/j.chom.2022.02.018
+ - doi: 10.1016/j.chom.2022.02.018
---
::
diff --git a/content/2.defense-systems/rst_3hp.md b/content/2.defense-systems/rst_3hp.md
index 404fd300e242b8465639033fe66b77582ad3b220..3e5012ef97a92047ac76f87f00a215ae1bafd63b 100644
--- a/content/2.defense-systems/rst_3hp.md
+++ b/content/2.defense-systems/rst_3hp.md
@@ -33,7 +33,7 @@ A system from *Escherichia coli (P2 loci)* in *Escherichia coli* has an anti-pha
::article-doi-list
---
items:
- - 10.1016/j.chom.2022.02.018
+ - doi: 10.1016/j.chom.2022.02.018
---
::
diff --git a/content/2.defense-systems/rst_duf4238.md b/content/2.defense-systems/rst_duf4238.md
index be8653a6c35c29d016bcb4380b81ee40ae81e4f6..5c2b0f60b396a4ab6b51fa484741556082f45bc7 100644
--- a/content/2.defense-systems/rst_duf4238.md
+++ b/content/2.defense-systems/rst_duf4238.md
@@ -33,7 +33,7 @@ A system from *Escherichia coli (P2 loci)* in *Escherichia coli* has an anti-pha
::article-doi-list
---
items:
- - 10.1016/j.chom.2022.02.018
+ - doi: 10.1016/j.chom.2022.02.018
---
::
diff --git a/content/2.defense-systems/rst_gop_beta_cll.md b/content/2.defense-systems/rst_gop_beta_cll.md
index 932d467812dae394ab47d3399a07600999c2836a..51ca9ffc6cf5b3946b0c9c1a11a98e04a1cbb53a 100644
--- a/content/2.defense-systems/rst_gop_beta_cll.md
+++ b/content/2.defense-systems/rst_gop_beta_cll.md
@@ -33,7 +33,7 @@ A system from *Enterobacteria phage P4* in *Escherichia coli* has an anti-phage
::article-doi-list
---
items:
- - 10.1016/j.chom.2022.02.018
+ - doi: 10.1016/j.chom.2022.02.018
---
::
diff --git a/content/2.defense-systems/rst_helicaseduf2290.md b/content/2.defense-systems/rst_helicaseduf2290.md
index 4221da9a6400e79454906a9392425c60273bf983..e813be908ff68438e3133f32197ef284d3d2b68e 100644
--- a/content/2.defense-systems/rst_helicaseduf2290.md
+++ b/content/2.defense-systems/rst_helicaseduf2290.md
@@ -33,7 +33,7 @@ A system from *Klebsiella pneumoniae (P4 loci)* in *Escherichia coli* has an ant
::article-doi-list
---
items:
- - 10.1016/j.chom.2022.02.018
+ - doi: 10.1016/j.chom.2022.02.018
---
::
diff --git a/content/2.defense-systems/rst_hydrolase-3tm.md b/content/2.defense-systems/rst_hydrolase-3tm.md
index afa9c3528c869f45fe39936f3e7e0f55d4527b9f..a423c687aba3555e8af37d6f7a4331e6c10c08f9 100644
--- a/content/2.defense-systems/rst_hydrolase-3tm.md
+++ b/content/2.defense-systems/rst_hydrolase-3tm.md
@@ -33,7 +33,7 @@ A system from *Escherichia coli (P4 loci)* in *Escherichia coli* has an anti-pha
::article-doi-list
---
items:
- - 10.1016/j.chom.2022.02.018
+ - doi: 10.1016/j.chom.2022.02.018
---
::
diff --git a/content/2.defense-systems/rst_paris.md b/content/2.defense-systems/rst_paris.md
index 98e839fd488cb164386a9e177186308cb10f4fd1..ba76ac6be9b7e68b7c600a1c48d21eb2191d0aed 100644
--- a/content/2.defense-systems/rst_paris.md
+++ b/content/2.defense-systems/rst_paris.md
@@ -1,7 +1,5 @@
---
title: Rst_PARIS
-tableColumns:
- doi: https://doi.org/10.1101/2021.01.21.427644
---
## Description
@@ -55,7 +53,8 @@ Subsystem Paris 2 with a system from *Escherichia coli (P4 loci)* in *Escherichi
::article-doi-list
---
items:
- - 10.1016/j.chom.2022.02.018
+ - doi: 10.1016/j.chom.2022.02.018
+
---
::
diff --git a/content/2.defense-systems/rst_rt-nitrilase-tm.md b/content/2.defense-systems/rst_rt-nitrilase-tm.md
index b27dcfc97108b4703f9926a769a47f8d2f3bac73..13a70ef02df581c448b01be0f15b45c9ba163355 100644
--- a/content/2.defense-systems/rst_rt-nitrilase-tm.md
+++ b/content/2.defense-systems/rst_rt-nitrilase-tm.md
@@ -33,7 +33,7 @@ A system from *Escherichia coli (P4 loci)* in *Escherichia coli* has an anti-pha
::article-doi-list
---
items:
- - 10.1016/j.chom.2022.02.018
+ - doi: 10.1016/j.chom.2022.02.018
---
::
diff --git a/content/2.defense-systems/rst_tir-nlr.md b/content/2.defense-systems/rst_tir-nlr.md
index 7a9c01aa9766f1a8ac67d7b0600177193d4df2ba..4cae46e9347d040dbdcaf6ef8ed8d3ea172c0cc5 100644
--- a/content/2.defense-systems/rst_tir-nlr.md
+++ b/content/2.defense-systems/rst_tir-nlr.md
@@ -33,7 +33,7 @@ A system from *Klebsiella pneumoniae (P4 loci)* in *Escherichia coli* has an ant
::article-doi-list
---
items:
- - 10.1016/j.chom.2022.02.018
+ - doi: 10.1016/j.chom.2022.02.018
---
::
diff --git a/content/2.defense-systems/sanata.md b/content/2.defense-systems/sanata.md
index 0c1c6299d1f6374603d767e86fc6cc20bd85c7f9..50554264def889eab0815f2122e7eeefa2eaf466 100644
--- a/content/2.defense-systems/sanata.md
+++ b/content/2.defense-systems/sanata.md
@@ -33,7 +33,7 @@ A system from *Shewanella sp. ANA-3* in *Escherichia coli* has an anti-phage eff
::article-doi-list
---
items:
- - 10.1016/j.molcel.2013.02.002
+ - doi: 10.1016/j.molcel.2013.02.002
---
::
diff --git a/content/2.defense-systems/sefir.md b/content/2.defense-systems/sefir.md
index cb4d0835e85d7545671c71286a8614f489a56427..e3b290bdcba975bf9dcbc9b7eb63aacca7e5ef9f 100644
--- a/content/2.defense-systems/sefir.md
+++ b/content/2.defense-systems/sefir.md
@@ -41,7 +41,7 @@ A system from *Bacillus sp. NIO-1130* in *Bacillus subtilis* has an anti-phage e
::article-doi-list
---
items:
- - 10.1016/j.chom.2022.09.017
+ - doi: 10.1016/j.chom.2022.09.017
---
::
diff --git a/content/2.defense-systems/septu.md b/content/2.defense-systems/septu.md
index 5706ef4768cb6ac2788e11334c389d4ff75ed228..1d6735392ea42b200eabfb4262d82b33ef7c9f3b 100644
--- a/content/2.defense-systems/septu.md
+++ b/content/2.defense-systems/septu.md
@@ -35,9 +35,9 @@ A system from *Bacillus weihenstephanensis* in *Bacillus subtilis* has an anti-p
::article-doi-list
---
items:
- - 10.1016/j.cell.2020.09.065
- - 10.1093/nar/gkab883
- - 10.1126/science.aar4120
+ - doi: 10.1016/j.cell.2020.09.065
+ - doi: 10.1093/nar/gkab883
+ - doi: 10.1126/science.aar4120
---
::
diff --git a/content/2.defense-systems/shango.md b/content/2.defense-systems/shango.md
index 9d3bb40dea8055d7c6f31530ac8311041beeae24..b9c024cac0808a39e0840a616e2dc274e6949140 100644
--- a/content/2.defense-systems/shango.md
+++ b/content/2.defense-systems/shango.md
@@ -44,7 +44,7 @@ A system from *Escherichia coli* in *Escherichia coli* has an anti-phage effect
::article-doi-list
---
items:
- - 10.1016/j.chom.2022.09.017
+ - doi: 10.1016/j.chom.2022.09.017
---
::
diff --git a/content/2.defense-systems/shedu.md b/content/2.defense-systems/shedu.md
index 2fedf255915adc3cf6babcbe52b81f0b5cd82542..769bd62e9eea5f69a2e7250b3e41cabaea2e701e 100644
--- a/content/2.defense-systems/shedu.md
+++ b/content/2.defense-systems/shedu.md
@@ -33,7 +33,7 @@ A system from *Bacillus cereus* in *Bacillus subtilis* has an anti-phage effect
::article-doi-list
---
items:
- - 10.1126/science.aar4120
+ - doi: 10.1126/science.aar4120
---
::
diff --git a/content/2.defense-systems/shosta.md b/content/2.defense-systems/shosta.md
index cb953d0f08c588db1454385a4281ca2a529000e5..7737d1fe8b137e824d6c1bca4a734b58e7d20967 100644
--- a/content/2.defense-systems/shosta.md
+++ b/content/2.defense-systems/shosta.md
@@ -35,9 +35,9 @@ A system from *Escherichia coli (P2 loci)* in *Escherichia coli* has an anti-pha
::article-doi-list
---
items:
- - 10.1016/j.chom.2022.09.017
- - 10.1016/j.chom.2022.09.017
- - 10.1101/gr.133850.111
+ - doi: 10.1016/j.chom.2022.09.017
+ - doi: 10.1016/j.chom.2022.09.017
+ - doi: 10.1101/gr.133850.111
---
::
diff --git a/content/2.defense-systems/sofic.md b/content/2.defense-systems/sofic.md
index 44a42d388bb906c45c51dcbf92f004f5a62c39c5..45910a14c978d4d45c019b30ef66dff2d9578e32 100644
--- a/content/2.defense-systems/sofic.md
+++ b/content/2.defense-systems/sofic.md
@@ -33,7 +33,7 @@ A system from *Escherichia coli* in *Escherichia coli* has an anti-phage effect
::article-doi-list
---
items:
- - 10.1016/j.chom.2022.09.017
+ - doi: 10.1016/j.chom.2022.09.017
---
::
diff --git a/content/2.defense-systems/spbk.md b/content/2.defense-systems/spbk.md
index 997540c7a1ddbc76740cdc54a1815c3e06b3cb07..5be0b1477dc6bcb5255baaf1cd95cb8b064a5965 100644
--- a/content/2.defense-systems/spbk.md
+++ b/content/2.defense-systems/spbk.md
@@ -33,7 +33,7 @@ A system from *Bacillus subtilis* in *Bacillus subtilis* has an anti-phage effec
::article-doi-list
---
items:
- - 10.1371/journal.pgen.1010065
+ - doi: 10.1371/journal.pgen.1010065
---
::
diff --git a/content/2.defense-systems/sspbcde.md b/content/2.defense-systems/sspbcde.md
index 9fa2782b76a2f77792fe4fec0a5d8c775dc9a843..f8e7de76f9aadb510de643459a8b48d8835dc581 100644
--- a/content/2.defense-systems/sspbcde.md
+++ b/content/2.defense-systems/sspbcde.md
@@ -39,8 +39,8 @@ Subsystem SspBCD+SspFGH with a system from *Vibrio anguillarum* in *Escherichia
::article-doi-list
---
items:
- - 10.1128/mBio.00613-21
- - 10.1128/mBio.00613-21
+ - doi: 10.1128/mBio.00613-21
+ - doi: 10.1128/mBio.00613-21
---
::
diff --git a/content/2.defense-systems/stk2.md b/content/2.defense-systems/stk2.md
index 0ed290d74d7077d87b7202c87591b41063c2f093..a01db5db00121b583ec0a9bd4a9dd94da8c66ef3 100644
--- a/content/2.defense-systems/stk2.md
+++ b/content/2.defense-systems/stk2.md
@@ -44,7 +44,7 @@ A system from *Staphylococcus epidermidis* in *Staphylococcus aureus* has an ant
::article-doi-list
---
items:
- - 10.1016/j.chom.2016.08.010
+ - doi: 10.1016/j.chom.2016.08.010
---
::
diff --git a/content/2.defense-systems/thoeris.md b/content/2.defense-systems/thoeris.md
index fb25d6a7bfc4b3e2f6b9481fa35be5331dc96229..f43c233e88ec60036cff1ecb0bf232865d1025e7 100644
--- a/content/2.defense-systems/thoeris.md
+++ b/content/2.defense-systems/thoeris.md
@@ -41,8 +41,8 @@ A system from *Bacillus dafuensis* in *Bacillus subtilis* has an anti-phage effe
::article-doi-list
---
items:
- - 10.1038/s41586-021-04098-7
- - 10.1126/science.aar4120
+ - doi: 10.1038/s41586-021-04098-7
+ - doi: 10.1126/science.aar4120
---
::
diff --git a/content/2.defense-systems/tiamat.md b/content/2.defense-systems/tiamat.md
index 4056a7e0b5aeff9de44fec543ab4ba8f3b140fa0..f23636a97d9ea8cc8ac8123d556c1927e87e9fd0 100644
--- a/content/2.defense-systems/tiamat.md
+++ b/content/2.defense-systems/tiamat.md
@@ -33,7 +33,7 @@ A system from *Bacillus cereus* in *Escherichia coli* has an anti-phage effect a
::article-doi-list
---
items:
- - 10.1016/j.chom.2022.09.017
+ - doi: 10.1016/j.chom.2022.09.017
---
::
diff --git a/content/2.defense-systems/uzume.md b/content/2.defense-systems/uzume.md
index 14396e886abfa3b1f5b739ffb21aa2af40d706a3..d2c63541176a1fd979ab7f5f4560610552bcfc2f 100644
--- a/content/2.defense-systems/uzume.md
+++ b/content/2.defense-systems/uzume.md
@@ -33,7 +33,7 @@ A system from *Bacillus sp. FJAT-27231* in *Bacillus subtilis* has an anti-phage
::article-doi-list
---
items:
- - 10.1016/j.chom.2022.09.017
+ - doi: 10.1016/j.chom.2022.09.017
---
::
diff --git a/content/2.defense-systems/viperin.md b/content/2.defense-systems/viperin.md
index 441f1427311d72594870a65f8afc2729750e2b79..d0cd5e2b9355c478168900e3317137c60e748485 100644
--- a/content/2.defense-systems/viperin.md
+++ b/content/2.defense-systems/viperin.md
@@ -84,7 +84,7 @@ Subsystem pVip63 with a system from *Pseudoalteromonas sp. XI10* in *Escherichia
::article-doi-list
---
items:
- - 10.1038/s41586-020-2762-2
+ - doi: 10.1038/s41586-020-2762-2
---
::
diff --git a/content/2.defense-systems/wadjet.md b/content/2.defense-systems/wadjet.md
index 14e56e676af27f666bb6355a271efea9aa6f6d45..024f7a9c514520ee86149b28aa5570e7b8e44e0c 100644
--- a/content/2.defense-systems/wadjet.md
+++ b/content/2.defense-systems/wadjet.md
@@ -35,7 +35,7 @@ Among the 22k complete genomes of RefSeq, this system is present in 2380 genomes
::article-doi-list
---
items:
- - 10.1126/science.aar4120
+ - doi: 10.1126/science.aar4120
---
::
diff --git a/content/2.defense-systems/zorya.md b/content/2.defense-systems/zorya.md
index 80cb000ae90fe87d67526566814b99aed75597f0..28c37942d06e3b6bb450651d665598319f0113d0 100644
--- a/content/2.defense-systems/zorya.md
+++ b/content/2.defense-systems/zorya.md
@@ -41,8 +41,8 @@ Subsystem Type III with a system from *Stenotrophomonas nitritireducens* in *Esc
::article-doi-list
---
items:
- - 10.1093/nar/gkab883
- - 10.1126/science.aar4120
+ - doi: 10.1093/nar/gkab883
+ - doi: 10.1126/science.aar4120
---
::
diff --git a/docker-compose.yml b/docker-compose.yml
index 8744a0047384421a569ae4e7125c963c4b62e3ca..db77b855f2ae404bc312e2c752c109f8291f9daa 100644
--- a/docker-compose.yml
+++ b/docker-compose.yml
@@ -5,6 +5,8 @@ services:
context: .
target: dev
container_name: nuxt
+ environment:
+ HOST: 0.0.0.0
volumes:
- .:/usr/src/app
- defense-finder-wiki-node-modules:/usr/src/app/node_modules
diff --git a/layouts/article.vue b/layouts/article.vue
index 46805b472cd8a1c1b6a294279710b8abac8be3ec..78da292c847a3528361b4b4a7e8142d9cf18400a 100644
--- a/layouts/article.vue
+++ b/layouts/article.vue
@@ -1,8 +1,10 @@
<script setup lang="ts">
const { page, surround } = useContent();
import { useCustomTheme } from '~/composables/useCustomTheme'
+import { useDisplay } from 'vuetify'
const { isDark } = useCustomTheme()
+const { mobile } = useDisplay()
</script>
<template>
@@ -17,10 +19,10 @@ const { isDark } = useCustomTheme()
</v-card> -->
<EditGitlab />
<v-row justify="space-between">
- <v-col v-for="(surroundPage, i) in surround" :key="surroundPage?._id" cols="auto">
+ <v-col v-for="(surroundPage, i) in surround" :key="surroundPage?._id" :cols="mobile ? '12' : 'auto'">
<v-btn v-if="surroundPage" :prepend-icon="i === 0 ? 'mdi-arrow-left' : undefined"
- :append-icon="i === 1 ? 'mdi-arrow-right' : undefined" variant="outlined" color="primary"
- :to="surroundPage?._path">{{ surroundPage?.title }}</v-btn>
+ :append-icon="i === 1 ? 'mdi-arrow-right' : undefined" :block="mobile ? true : false" variant="outlined"
+ color="primary" :to="surroundPage?._path">{{ surroundPage?.title }}</v-btn>
</v-col>
</v-row>
</v-container>
diff --git a/pages/defense-systems.vue b/pages/defense-systems.vue
index a417b5f1ea4b0e0ad01694761279570f95b01bb2..fb37b86a549ea585ea0dc2f0c335d326fac18b6c 100644
--- a/pages/defense-systems.vue
+++ b/pages/defense-systems.vue
@@ -44,10 +44,8 @@ const systems = computed(() => {
</script>
<template>
- <v-card>
+ <v-card flat color="transparent">
<v-card-title>List systems</v-card-title>
- <v-card-text>
- <ListSystems :headers=headers :systems="systems"></ListSystems>
- </v-card-text>
+ <ListSystems :headers=headers :systems="systems"></ListSystems>
</v-card>
</template>
\ No newline at end of file