From 6227e730caa44558cb89539c9287dde31e9520b8 Mon Sep 17 00:00:00 2001
From: Remi PLANEL <rplanel@pasteur.fr>
Date: Fri, 5 Jan 2024 13:27:17 +0100
Subject: [PATCH] fix: remove output file if exists directly in the script
---
packages/df-wiki-cli/df_wiki_cli/content/main.py | 2 ++
1 file changed, 2 insertions(+)
diff --git a/packages/df-wiki-cli/df_wiki_cli/content/main.py b/packages/df-wiki-cli/df_wiki_cli/content/main.py
index 214ccec9..9075e421 100644
--- a/packages/df-wiki-cli/df_wiki_cli/content/main.py
+++ b/packages/df-wiki-cli/df_wiki_cli/content/main.py
@@ -178,6 +178,8 @@ def systems(
with open(pfam, "r") as pf:
pfam_df = pd.read_csv(pf, index_col="AC", keep_default_na=False)
systems = []
+ if (output.exists()):
+ output.unlink()
with open(output, "a") as ty:
for file in dir.iterdir():
if file.suffix == ".md":
--
GitLab