From 632c9e9523083c450876f545fc672637c883d301 Mon Sep 17 00:00:00 2001
From: Remi PLANEL <rplanel@pasteur.fr>
Date: Thu, 21 Mar 2024 16:33:13 +0100
Subject: [PATCH] handle case where cannot remove prefix using __ as separator
---
components/content/pdockqMatrix.vue | 16 ++++++++++------
1 file changed, 10 insertions(+), 6 deletions(-)
diff --git a/components/content/pdockqMatrix.vue b/components/content/pdockqMatrix.vue
index 540fa6b3..f32f1ceb 100644
--- a/components/content/pdockqMatrix.vue
+++ b/components/content/pdockqMatrix.vue
@@ -81,18 +81,22 @@ const computedSystem = computed(() => {
const groupedPdocks = computed(() => {
const toValData = toValue(data)
+ const getSeqName = (d) => {
+ if (d.includes("__")) {
+ return d.split("__")[1]
+ } else {
+ return d
+ }
+ }
if (toValData?.hits) {
return d3.groups(toValData.hits.flatMap(({ System_name_ok, pDockQ, pdb, nb_sys, proteins_in_the_prediction, system_genes }) => {
if (proteins_in_the_prediction.length === 2) {
- const sanitizedSystemGenes = system_genes.map(d => d.split("__")[1])
- const sanitizedProteins = proteins_in_the_prediction.map(d => d.split("__")[1])
+ const sanitizedSystemGenes = system_genes.map(getSeqName)
+ const sanitizedProteins = proteins_in_the_prediction.map(getSeqName)
const setProteins = new Set(sanitizedProteins)
-
-
if (setProteins.size === 2) {
-
return sanitizedProteins.map((prot, i) => {
if (i === 0) {
return { System_name_ok, system_genes: sanitizedSystemGenes, pDockQ, pdb, nb_sys, proteins_in_the_prediction: sanitizedProteins, protX: prot, protY: sanitizedProteins[i + 1] }
@@ -108,7 +112,7 @@ const groupedPdocks = computed(() => {
} else {
throw createError(`More than 2 proteins in a dimer structure for system ${computedSystem.value} !`)
}
- }), d => d.system_genes.sort().join("--"))
+ }), d => d.system_genes.sort().join(" / "))
} else { return [] }
})
--
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