diff --git a/components/Nav/Navbar.vue b/components/Nav/Navbar.vue
index 4863d82e6a4ab8b3709459d2462b3c10f012ac83..06fdd172676f58328b192d135ff763f5d640032c 100644
--- a/components/Nav/Navbar.vue
+++ b/components/Nav/Navbar.vue
@@ -1,5 +1,5 @@
<template>
- <v-app-bar :elevation="0" border>
+ <v-app-bar :elevation="0" border density="prominent">
<template #prepend>
<v-app-bar-nav-icon @click.stop="drawer = !drawer"></v-app-bar-nav-icon>
<!-- <Logo height="45px" /> -->
@@ -70,6 +70,7 @@ const sections = ref([
href: runtimeConfig.public.defenseFinderWebservice,
},
{ id: "refseq", label: "REFSEQ", href: refinedRefSeqPath.value },
+ { id: "toto", label: "Help", href: "/help" },
]);
const drawer = ref(true);
diff --git a/content/1.help.md b/content/1.help.md
new file mode 100644
index 0000000000000000000000000000000000000000..aa191c1c92c6a6e1835e7540648189b868068d05
--- /dev/null
+++ b/content/1.help.md
@@ -0,0 +1,10 @@
+---
+title: help
+layout: article
+icon: 'md:list'
+---
+
+
+
+## test
+de l'aide
\ No newline at end of file
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diff --git a/pages/refseq.vue b/pages/refseq.vue
index e905c3d1c2d2822926a1e9ef824dfdd3277ff940..fc10c341553b26cbbea917dcbbbcede36105b969 100644
--- a/pages/refseq.vue
+++ b/pages/refseq.vue
@@ -20,8 +20,8 @@ const {
queryContent("/_partial/refseq").where({ _partial: true }).findOne()
);
-const availableTaxo = ref(["species", "genus"]);
-const selectedTaxoRank = ref("species");
+const availableTaxo = ref(["species", "genus", "phylum"]);
+const selectedTaxoRank = ref("phylum");
const sanitizedRefseq = computed(() => {
if (refseqData.value?.body) {
return refseqData.value.body;
@@ -46,6 +46,7 @@ const headers = ref([
title: "System",
key: "type",
},
+ { title: "Phylum", key: "phylum" },
{ title: "Genus", key: "genus" },
{ title: "Species", key: "species" },
]);
@@ -80,32 +81,32 @@ function filterOnlyCapsText(value, query, item) {
const computedDistriSystemOptions = computed(() => {
const groupYOption = facetDistriSystem.value
? {
- fy: "type",
- y: selectedTaxoRank.value,
- fill: selectedTaxoRank.value,
+ fx: "type",
+ x: selectedTaxoRank.value,
+ // fill: selectedTaxoRank.value,
tip: true,
sort: { y: "-x" },
}
: {
- y: "type",
+ x: "type",
tip: true,
- fill: selectedTaxoRank.value,
- sort: { y: "-x" },
+ // fill: selectedTaxoRank.value,
+ sort: { x: "-y" },
};
return {
marginLeft: facetDistriSystem.value ? 120 : 112,
- x: { label: null },
+ x: { label: null, tickRotate: 40 },
y: { grid: true },
color: { legend: true },
width: computedWidth.value,
height: facetDistriSystem.value ? height.value * 8 : height.value * 2,
marks: [
Plot.frame(),
- Plot.barX(
+ Plot.barY(
unref(selectedRefSeq.value),
- Plot.groupY(
- { x: facetDistriSystem.value ? "proportion-facet" : "count" },
+ Plot.groupX(
+ { y: facetDistriSystem.value ? "proportion-facet" : "count" },
groupYOption
)
),
@@ -126,7 +127,7 @@ const computedDistriTaxoOptions = computed(() => {
y: selectedTaxoRank.value,
tip: true,
fill: "type",
- offset: "normalize",
+ // offset: "normalize",
sort: { y: "x", reverse: true },
};
@@ -150,10 +151,7 @@ const computedDistriTaxoOptions = computed(() => {
Plot.frame(),
Plot.barX(
unref(selectedRefSeq.value),
- Plot.groupY(
- { x: facet.value ? "proportion-facet" : "count" },
- groupYOption
- )
+ Plot.groupY({ x: "count" }, groupYOption)
),
],
};