From 738f9b739867dd7836a0cfb4a44b076f418b9d5e Mon Sep 17 00:00:00 2001
From: ftesson <florian.tesson@cri-paris.org>
Date: Mon, 22 Jan 2024 13:10:28 +0100
Subject: [PATCH] abih modify mermaid add description
---
content/3.defense-systems/abih.md | 18 ++++++++++++------
1 file changed, 12 insertions(+), 6 deletions(-)
diff --git a/content/3.defense-systems/abih.md b/content/3.defense-systems/abih.md
index b895ad49..98aafd7f 100644
--- a/content/3.defense-systems/abih.md
+++ b/content/3.defense-systems/abih.md
@@ -10,20 +10,26 @@ tableColumns:
Activator: Unknown
Effector: Unknown
PFAM: PF14253
+contributors:
+ - Florian Tesson
relevantAbstracts:
- doi: 10.1023/A:1002027321171
- doi: 10.1016/j.mib.2005.06.006
- doi: 10.1111/j.1574-6968.1996.tb08446.x
-
---
# AbiH
## Description
-AbiH is a single-gene abortive infection system described in Lactococcus.
+AbiH a system discovered in 1996 :ref{doi=10.1111/j.1574-6968.1996.tb08446.x}.
+
+AbiH is one of the so-called "Abi" systems for "Abortive infection" discovered in the 90's in research related to the dairy industry :ref{doi=10.1016/j.mib.2005.06.006}. Even though, their name corresponds to an abortive infection, their mechanism of action does not necessarily correspond to an abortive infection. For the abortive infection, phenotype AbiH is classified as unknown in :ref{doi=10.1016/j.mib.2023.102312}.
+
+This system is a single gene system with no known domain (except its own PFAM).
+
+## Molecular mechanism
-## Molecular mechanism
-To the best of our knowledge, no molecular mechanism has been described so far for AbiH.
+As far as we are aware, the molecular mechanism is unknown.
## Example of genomic structure
@@ -64,12 +70,12 @@ dataUrls:
<mermaid>
graph LR;
- Chopin_2005[<a href='https://doi.org/10.1016/j.mib.2005.06.006'>Chopin et al., 2005</a>] --> Origin_0
+ Prevost_1996[<a href='https://doi.org/10.1016/j.mib.2005.06.006'>Chopin et al., 2005</a>] --> Origin_0
Origin_0[lactococci
<a href='https://ncbi.nlm.nih.gov/protein/CAA66252.1'>CAA66252.1</a>] --> Expressed_0[lactococci]
Expressed_0[lactococci] ----> 936 & c2
subgraph Title1[Reference]
- Chopin_2005
+ Prevost_1996
end
subgraph Title2[System origin]
Origin_0
--
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