From 73d0a251c04566b976ce562e93f92257da39adbb Mon Sep 17 00:00:00 2001
From: Remi PLANEL <rplanel@pasteur.fr>
Date: Thu, 9 Nov 2023 12:07:15 +0100
Subject: [PATCH] add step to update refseq index
---
.gitlab-ci.yml | 23 +++++++++++++++++++++--
1 file changed, 21 insertions(+), 2 deletions(-)
diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index b3be189f..44059a98 100644
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -14,6 +14,7 @@ stages:
- get-data
- format-data
- deploy-meilisearch
+ - update-meilisearch-indexes
- get-meili-key
- build
- deploy
@@ -70,8 +71,6 @@ deploy:meilisearch:dev:
url: "https://defense-finder-meilisearch.dev.pasteur.cloud"
-
-
delete-meili-helm-release:
except:
- master
@@ -88,6 +87,26 @@ delete-meili-helm-release:
- echo "Removing $CI_PROJECT_NAME-$CI_ENVIRONMENT_NAME-meilisearch"
- helm delete -n ${NAMESPACE} ${CI_PROJECT_NAME}-${CI_ENVIRONMENT_NAME}-meilisearch
+# Update Meili search indexes
+
+.update-refseq-index:
+ stage: update-meilisearch-indexes
+ image: curlimages/curl:8.4.0
+ variables:
+ MEILI_HOST: "http://localhost:7700"
+
+ script:
+ - >
+ ./scripts/init-refseq-index.sh
+ -n ${MEILI_HOST}
+ -k ${MEILI_MASTER_KEY}
+ -r data/refseq_res.csv
+
+update-refseq-index:dev:
+ needs:
+ - deploy:meilisearch:dev
+ variables:
+ MEILI_HOST: 'https://defense-finder-meilisearch.dev.pasteur.cloud'
############# get-meili-key ###############
--
GitLab