From c1d095a93342ec4232efab5a1d44b157054b5ec4 Mon Sep 17 00:00:00 2001
From: ftesson <florian.tesson@cri-paris.org>
Date: Wed, 3 Jan 2024 11:49:19 +0100
Subject: [PATCH] Update abik.md
---
content/3.defense-systems/abik.md | 35 ++++++++++++++++++++-----------
1 file changed, 23 insertions(+), 12 deletions(-)
diff --git a/content/3.defense-systems/abik.md b/content/3.defense-systems/abik.md
index 284f5d9d..2c91e310 100644
--- a/content/3.defense-systems/abik.md
+++ b/content/3.defense-systems/abik.md
@@ -10,9 +10,32 @@ tableColumns:
Activator: Unknown
Effector: Unknown
PFAM: PF00078
+contributors:
+ - Florian Tesson
+relevantAbstracts:
+ - doi: 10.1023/A:1002027321171
+ - doi: 10.1016/j.mib.2005.06.006
+ - doi: 10.1093/nar/gkac467
+ - doi: 10.1128/aem.63.4.1274-1283.1997
---
# AbiK
+
+## Description
+
+
+The AbiK defense system was discovered in 1997 in *Lactococcus lactis* :ref{doi=10.1128/aem.63.4.1274-1283.1997}. AbiK is a single gene system with a size of around 650 amino acid.
+
+AbiK is one of the so-called "Abi" systems for "Abortive infection" discovered in the 90's in research related to the dairy industry :ref{doi=10.1016/j.mib.2005.06.006}.
+
+Since it was discovered a similarity in amino acids was found with [AbiA](/defense-systems/abia).
+However, with the discovery of dozens of new systems, it was categorize as one of the UG/Abi defense systems :ref{doi=10.1093/nar/gkac467} along with [DRT](/defense-systems/drt) different subsystems, [AbiA](/defense-systems/abia) and [AbiP2](/defense-systems/abip2).
+
+Those systems are characterized by the presence of a reverse transcriptase domain of the "Unknown Group RT".
+
+## Molecular mechanism
+To our knowledge, the molecular mechanism is unknown. Similarly, for the other systems of this family, the molecular mechanism remain unknown.
+
## Example of genomic structure
The AbiK is composed of 1 protein: AbiK.
@@ -71,15 +94,3 @@ end
style Title3 fill:none,stroke:none,stroke-width:none
style Title4 fill:none,stroke:none,stroke-width:none
</mermaid>
-## Relevant abstracts
-
-::relevant-abstracts
----
-items:
- - doi: 10.1023/A:1002027321171
- - doi: 10.1016/j.mib.2005.06.006
- - doi: 10.1093/nar/gkac467
-
----
-::
-
--
GitLab