From e59a2a186760910e3e0549b16e33a1fd153b4b5c Mon Sep 17 00:00:00 2001
From: Remi PLANEL <rplanel@pasteur.fr>
Date: Thu, 2 May 2024 11:17:06 +0200
Subject: [PATCH] same title within operon
---
components/OperonStructure.vue | 25 ++++++++-----------------
1 file changed, 8 insertions(+), 17 deletions(-)
diff --git a/components/OperonStructure.vue b/components/OperonStructure.vue
index a1a31799..87631009 100644
--- a/components/OperonStructure.vue
+++ b/components/OperonStructure.vue
@@ -332,7 +332,7 @@ function drawStructure(operonGroup: d3.Selection<SVGGElement, any, SVGElement |
.attr("width", d => d.width)
.attr("height", d => d.height)
.attr("preserveAspectRatio", "xMidYMid meet")
- structureSelection.select("title").text(d => `${d.gene} | ${d.size} aa`)
+ structureSelection.select("title").text(d => operonTitle(d))
}
@@ -392,7 +392,7 @@ function drawGenes(operonGroup: d3.Selection<SVGGElement, any, SVGElement | null
genePathSelection
.attr("d", d => drawGene(d).toString())
- genesSelection.select("title").text(d => `${d.gene} | ${d.size} aa${geneTitle(d)}`)
+ genesSelection.select("title").text(d => operonTitle(d))
function drawGene({ width, height }) {
const context = d3.path()
context.moveTo(0, 0)
@@ -404,6 +404,11 @@ function drawGenes(operonGroup: d3.Selection<SVGGElement, any, SVGElement | null
}
}
+
+function operonTitle(d: StructureOperonGeneWithCoordinate) {
+ return `${d.gene} | ${d.size} aa${geneTitle(d)}`
+}
+
function geneTitle(d: StructureOperonGeneWithCoordinate) {
if (d?.exchangeables && d.exchangeables?.length > 0) {
return `\nExchangeables: ${d.exchangeables.map(d => d.split("__")[1]).join(", ")}`
@@ -447,7 +452,6 @@ function drawGenesLabel(operonGroup: d3.Selection<SVGGElement, any, SVGElement |
)
updateSelection
-
.attr("cursor", d => d.highlight ? "pointer" : null)
.select<SVGTextElement>("text")
.attr("transform", function (d) {
@@ -460,26 +464,13 @@ function drawGenesLabel(operonGroup: d3.Selection<SVGGElement, any, SVGElement |
return `translate(${d.x + d.width / 2 - toValue(width) / 2},${d.y}) rotate(${toValue(rotate)}) `
}
return null
-
})
.attr("style", d => d.highlight ? "font-weight: 700" : null)
.text(d => d.gene)
- updateSelection.select("title").text(d => d.gene)
+ updateSelection.select("title").text(d => operonTitle(d))
}
-
-
-
-function adjacentlinks(nodes: Record<string, any>) {
- const links = []
- for (let i = 0; i < nodes.length; i++) {
- if (i < nodes.length - 1) {
- links.push({ index: i, source: nodes[i], target: nodes[+1] })
- }
- }
- return links
-}
</script>
<template>
<div ref="gbContainer">
--
GitLab