diff --git a/README.md b/README.md index e3088429d7a615b0843f5f3c8b1fbc81522cc27e..91ebbee52b676a5def5fab5431769616100734e3 100644 --- a/README.md +++ b/README.md @@ -15,16 +15,17 @@ To run the application you need: From the root directory of the repository: ```bash +docker-compose build docker-compose up ``` > 💬 *If you run the application for the first time, you will need to create the database depending on the name of your `DATABASE_NAME` env variable (`fastgenes` being the default value). [[More information below](#-create-your-db-on-postgresql)]*. -Then you can visit the [documentation](http://localhost/docs) of the project. +Then you can visit the [app](http://localhost) and the [documentation](http://localhost/docs) of the project. ### 📄 `.env` -> 💬 *This file allows use to deal with environment variable.* +> 💬 *This file allows user to deal with environment variable.* Example of the different env variable is available: @@ -32,6 +33,8 @@ Example of the different env variable is available: If you remove the `.sample` extension to the file, the `.env` is read by the backend application. +The full list of Environment variables used by the application can be found at `app/app/core/config.py`. + ------- # 📠Development & Contributions @@ -92,6 +95,8 @@ exit You can create a test database using the API directly and some test files available on the repository. +> 💬 *You can use directly the [documentation page](http://localhost/docs) to run the different commands.* + Title | route | input path ----- | ----- | ---------- Create KEGG database | `/api/admin_db/create_kegg_ko` | no input file necessary, process is quick for all KEGG KO.