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Metagenomics
metagenedb
Commits
23bb1f90
Commit
23bb1f90
authored
Jul 01, 2019
by
Kenzo-Hugo Hillion
♻
Browse files
Merge branch 'master' of gitlab.pasteur.fr:metagenomics/metagenedb
parents
724674d2
7512c87e
Pipeline
#12949
passed with stage
in 1 minute and 16 seconds
Changes
6
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.gitlab-ci.yml
View file @
23bb1f90
...
...
@@ -19,9 +19,9 @@ cache:
-
~/.cache/pip/
before_script
:
-
pip install pipenv
-
cd backend
-
pip install -r requirements_dev.txt
-
pip install -e .
-
pipenv install --dev --system --deploy
test-backend
:
stage
:
lint_test_coverage_backend
...
...
backend/Dockerfile
View file @
23bb1f90
...
...
@@ -2,13 +2,12 @@ FROM python:3.7
ENV
PYTHONDONTWRITEBYTECODE 1
ENV
PYTHONUNBUFFERED 1
ENV
WEB_DOCKER 1
# Install pipenv
RUN
pip
install
pipenv
WORKDIR
/code
# Copy requirements and install
COPY
requirements.txt /code/
RUN
pip
install
-r
requirements.txt
# Copy
the project
and install
# Copy
Pipfile
and install
COPY
. /code/
RUN
pip
install
-e
.
\ No newline at end of file
RUN
pipenv
install
--system
--deploy
backend/Pipfile
0 → 100644
View file @
23bb1f90
[[source]]
name
=
"pypi"
url
=
"https://pypi.org/simple"
verify_ssl
=
true
[dev-packages]
atomicwrites
=
"=
=
1.3.0
"
attrs = "
=
=
19.1.0
"
coverage = "
=
=
4.5.3
"
entrypoints = "
=
=
0.3
"
flake8 = "
=
=
3.7.7
"
importlib-metadata = "
=
=
0.18
"
kiwisolver = "
=
=
1.1.0
"
mccabe = "
=
=
0.6.1
"
more-itertools = "
=
=
7.0.0
"
pluggy = "
=
=
0.12.0
"
py = "
=
=
1.8.0
"
pycodestyle = "
=
=
2.5.0
"
pyflakes = "
=
=
2.1.1
"
pyparsing = "
=
=
2.4.0
"
pytest = "
=
=
4.6.3
"
pytest-cov = "
=
=
2.7.1
"
pytest-django = "
=
=
3.5.0
"
wcwidth = "
=
=
0.1.7
"
zipp = "
=
=
0.5.1
"
Cycler = "
=
=
0.10.0
"
[packages]
certifi = "
=
=
2019.6.16
"
chardet = "
=
=
3.0.4
"
django-cors-headers = "
=
=
3.0.2
"
django-environ = "
=
=
0.4.5
"
django-extensions = "
=
=
2.1.7
"
django-filter = "
=
=
2.1.0
"
djangorestframework = "
=
=
3.9.4
"
djangorestframework-jwt = "
=
=
1.11.0
"
idna = "
=
=
2.8
"
numpy = "
=
=
1.16.4
"
pandas = "
=
=
0.24.2
"
psycopg2 = "
=
=
2.8.2
"
python-dateutil = "
=
=
2.8.0
"
pytz = "
=
=
2019.1
"
requests = "
=
=
2.22.0
"
six = "
=
=
1.12.0
"
sqlparse = "
=
=
0.3.0
"
urllib3 = "
=
=
1.25.3
"
Django = "
=
=
2.2.1
"
PyJWT = "
=
=
1.7.1
"
metagenedb
=
{
editable
=
true
,path
=
"."
}
[requires]
python_version
=
"3.7"
backend/Pipfile.lock
0 → 100644
View file @
23bb1f90
This diff is collapsed.
Click to expand it.
backend/requirements.txt
deleted
100644 → 0
View file @
724674d2
certifi==2019.6.16
chardet==3.0.4
Django==2.2.1
django-cors-headers==3.0.2
django-environ==0.4.5
django-extensions==2.1.7
django-filter==2.1.0
djangorestframework==3.9.4
djangorestframework-jwt==1.11.0
idna==2.8
numpy==1.16.4
pandas==0.24.2
psycopg2==2.8.2
PyJWT==1.7.1
python-dateutil==2.8.0
pytz==2019.1
requests==2.22.0
six==1.12.0
sqlparse==0.3.0
urllib3==1.25.3
backend/requirements_dev.txt
deleted
100644 → 0
View file @
724674d2
atomicwrites==1.3.0
attrs==19.1.0
coverage==4.5.3
cycler==0.10.0
Django==2.2.1
django-cors-headers==3.0.2
django-environ==0.4.5
django-extensions==2.1.7
django-filter==2.1.0
djangorestframework==3.9.4
djangorestframework-jwt==1.11.0
entrypoints==0.3
flake8==3.7.7
importlib-metadata==0.18
kiwisolver==1.1.0
mccabe==0.6.1
more-itertools==7.0.0
numpy==1.16.4
packaging==19.0
pandas==0.24.2
pluggy==0.12.0
psycopg2==2.8.2
py==1.8.0
pycodestyle==2.5.0
pyflakes==2.1.1
PyJWT==1.7.1
pyparsing==2.4.0
pytest==4.6.3
pytest-cov==2.7.1
pytest-django==3.5.0
pytz==2019.1
six==1.12.0
sqlparse==0.3.0
wcwidth==0.1.7
zipp==0.5.1
\ No newline at end of file
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