Commit 5333a16a authored by Kenzo-Hugo Hillion's avatar Kenzo-Hugo Hillion
Browse files

Closes #144 replace bioapi by dabeplech

parent 6f4987d8
...@@ -58,7 +58,6 @@ packaging = "*" ...@@ -58,7 +58,6 @@ packaging = "*"
python-slugify = "*" python-slugify = "*"
marshmallow = "*" marshmallow = "*"
django-pandas = "*" django-pandas = "*"
bioapi = {git = "https://github.com/khillion/bioapi.git"}
django-admin-list-filter-dropdown = "*" django-admin-list-filter-dropdown = "*"
gunicorn = "*" gunicorn = "*"
pyfastx = "*" pyfastx = "*"
...@@ -67,6 +66,7 @@ redis = "*" ...@@ -67,6 +66,7 @@ redis = "*"
django-health-check = "==3.0.0" django-health-check = "==3.0.0"
django-redis = "*" django-redis = "*"
kombu = "*" kombu = "*"
dabeplech = "*"
[requires] [requires]
python_version = "3.7" python_version = "3.7"
{ {
"_meta": { "_meta": {
"hash": { "hash": {
"sha256": "92db23f20aeda23e0c9540438d0a34f33d1d3a41422a09e9d721c98b6cb3b754" "sha256": "18364783dafff055524c3c61846e2417bf68802229244339ed362d31e6ec4ae7"
}, },
"pipfile-spec": 6, "pipfile-spec": 6,
"requires": { "requires": {
...@@ -18,17 +18,19 @@ ...@@ -18,17 +18,19 @@
"default": { "default": {
"amqp": { "amqp": {
"hashes": [ "hashes": [
"sha256:6e649ca13a7df3faacdc8bbb280aa9a6602d22fd9d545336077e573a1f4ff3b8", "sha256:70cdb10628468ff14e57ec2f751c7aa9e48e7e3651cfd62d431213c0c4e58f21",
"sha256:77f1aef9410698d20eaeac5b73a87817365f457a507d82edf292e12cbb83b08d" "sha256:aa7f313fb887c91f15474c1229907a04dac0b8135822d6603437803424c0aa59"
], ],
"version": "==2.5.2" "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3, 3.4'",
"version": "==2.6.1"
}, },
"asgiref": { "asgiref": {
"hashes": [ "hashes": [
"sha256:3e4192eaec0758b99722f0b0666d5fbfaa713054d92e8de5b58ba84ec5ce696f", "sha256:7e51911ee147dd685c3c8b805c0ad0cb58d360987b56953878f8c06d2d1c6f1a",
"sha256:c8f49dd3b42edcc51d09dd2eea8a92b3cfc987ff7e6486be734b4d0cbfd5d315" "sha256:9fc6fb5d39b8af147ba40765234fa822b39818b12cc80b35ad9b0cef3a476aed"
], ],
"version": "==3.2.5" "markers": "python_version >= '3.5'",
"version": "==3.2.10"
}, },
"billiard": { "billiard": {
"hashes": [ "hashes": [
...@@ -37,25 +39,21 @@ ...@@ -37,25 +39,21 @@
], ],
"version": "==3.6.3.0" "version": "==3.6.3.0"
}, },
"bioapi": {
"git": "https://github.com/khillion/bioapi.git",
"ref": "699345c6fbd8cc1f25975772d7b6c9a605bf26ff"
},
"celery": { "celery": {
"hashes": [ "hashes": [
"sha256:108a0bf9018a871620936c33a3ee9f6336a89f8ef0a0f567a9001f4aa361415f", "sha256:a92e1d56e650781fb747032a3997d16236d037c8199eacd5217d1a72893bca45",
"sha256:5b4b37e276033fe47575107a2775469f0b721646a08c96ec2c61531e4fe45f2a" "sha256:d220b13a8ed57c78149acf82c006785356071844afe0b27012a4991d44026f9f"
], ],
"index": "pypi", "index": "pypi",
"version": "==4.4.2" "version": "==4.4.7"
}, },
"certifi": { "certifi": {
"hashes": [ "hashes": [
"sha256:017c25db2a153ce562900032d5bc68e9f191e44e9a0f762f373977de9df1fbb3", "sha256:5930595817496dd21bb8dc35dad090f1c2cd0adfaf21204bf6732ca5d8ee34d3",
"sha256:25b64c7da4cd7479594d035c08c2d809eb4aab3a26e5a990ea98cc450c320f1f" "sha256:8fc0819f1f30ba15bdb34cceffb9ef04d99f420f68eb75d901e9560b8749fc41"
], ],
"index": "pypi", "index": "pypi",
"version": "==2019.11.28" "version": "==2020.6.20"
}, },
"chardet": { "chardet": {
"hashes": [ "hashes": [
...@@ -65,6 +63,12 @@ ...@@ -65,6 +63,12 @@
"index": "pypi", "index": "pypi",
"version": "==3.0.4" "version": "==3.0.4"
}, },
"colored": {
"hashes": [
"sha256:056fac09d9e39b34296e7618897ed1b8c274f98423770c2980d829fd670955ed"
],
"version": "==1.4.2"
},
"coreapi": { "coreapi": {
"hashes": [ "hashes": [
"sha256:46145fcc1f7017c076a2ef684969b641d18a2991051fddec9458ad3f78ffc1cb", "sha256:46145fcc1f7017c076a2ef684969b641d18a2991051fddec9458ad3f78ffc1cb",
...@@ -79,13 +83,21 @@ ...@@ -79,13 +83,21 @@
], ],
"version": "==0.0.4" "version": "==0.0.4"
}, },
"dabeplech": {
"hashes": [
"sha256:125802b13e41511434588f076b43e764e127cb3f590bc47a02a28451220d6331",
"sha256:4c5dcd9878030b8a9022f529febc300fcf686eb72003deeecfd1e33e159c7b0e"
],
"index": "pypi",
"version": "==0.0.6"
},
"django": { "django": {
"hashes": [ "hashes": [
"sha256:50b781f6cbeb98f673aa76ed8e572a019a45e52bdd4ad09001072dfd91ab07c8", "sha256:1a63f5bb6ff4d7c42f62a519edc2adbb37f9b78068a5a862beff858b68e3dc8b",
"sha256:89e451bfbb815280b137e33e454ddd56481fdaa6334054e6e031041ee1eda360" "sha256:2d390268a13c655c97e0e2ede9d117007996db692c1bb93eabebd4fb7ea7012b"
], ],
"index": "pypi", "index": "pypi",
"version": "==3.0.4" "version": "==3.1"
}, },
"django-admin-list-filter-dropdown": { "django-admin-list-filter-dropdown": {
"hashes": [ "hashes": [
...@@ -97,11 +109,11 @@ ...@@ -97,11 +109,11 @@
}, },
"django-cors-headers": { "django-cors-headers": {
"hashes": [ "hashes": [
"sha256:a5960addecc04527ab26617e51b8ed42f0adab4594b24bb0f3c33e2bd3857c3f", "sha256:5240062ef0b16668ce8a5f43324c388d65f5439e1a30e22c38684d5ddaff0d15",
"sha256:a785b5f446f6635810776d9f5f5d23e6a2a2f728ea982648370afaf0dfdf2627" "sha256:f5218f2f0bb1210563ff87687afbf10786e080d8494a248e705507ebd92d7153"
], ],
"index": "pypi", "index": "pypi",
"version": "==3.2.1" "version": "==3.4.0"
}, },
"django-environ": { "django-environ": {
"hashes": [ "hashes": [
...@@ -113,19 +125,19 @@ ...@@ -113,19 +125,19 @@
}, },
"django-extensions": { "django-extensions": {
"hashes": [ "hashes": [
"sha256:1a03c4e8bade575f8c2be6c76456f8a2be3f9b02ab9f47d3535afa9562dc0493", "sha256:237e8262ce2a4ec8acd2ee6cbc822095e26e78f72ceb77d4d0a0918860f84fbb",
"sha256:2699cc1d6fb4bd393c0b5832fea4bc685f2ace5800b3c9ff222b2080f161ac04" "sha256:d1e94df479daf681c33f2f5647403ee904e9268b00b5506705f4c1ee0067ed1b"
], ],
"index": "pypi", "index": "pypi",
"version": "==2.2.8" "version": "==3.0.4"
}, },
"django-filter": { "django-filter": {
"hashes": [ "hashes": [
"sha256:558c727bce3ffa89c4a7a0b13bc8976745d63e5fd576b3a9a851650ef11c401b", "sha256:11e63dd759835d9ba7a763926ffb2662cf8a6dcb4c7971a95064de34dbc7e5af",
"sha256:c3deb57f0dd7ff94d7dce52a047516822013e2b441bed472b722a317658cfd14" "sha256:616848eab6fc50193a1b3730140c49b60c57a3eda1f7fc57fa8505ac156c6c75"
], ],
"index": "pypi", "index": "pypi",
"version": "==2.2.0" "version": "==2.3.0"
}, },
"django-health-check": { "django-health-check": {
"hashes": [ "hashes": [
...@@ -136,27 +148,27 @@ ...@@ -136,27 +148,27 @@
}, },
"django-pandas": { "django-pandas": {
"hashes": [ "hashes": [
"sha256:738cc03ffb411eef3eb02334d1f5a5d40697099a92ac59eb39629c08a9c2d6fb", "sha256:79d96a6701c1ab230867f4e3b9fbff3e3f50771edd741d12be4f3147fd2ecd4b",
"sha256:788f4652012a67d2c5849191b01af58255f7af815ab612bebca019854235a9bc" "sha256:ffaea2a050cb82ba23c0a962b8a797adfc9a6ae23bb99a6e2c62ef36a8ef33b2"
], ],
"index": "pypi", "index": "pypi",
"version": "==0.6.1" "version": "==0.6.2"
}, },
"django-redis": { "django-redis": {
"hashes": [ "hashes": [
"sha256:a5b1e3ffd3198735e6c529d9bdf38ca3fcb3155515249b98dc4d966b8ddf9d2b", "sha256:1133b26b75baa3664164c3f44b9d5d133d1b8de45d94d79f38d1adc5b1d502e5",
"sha256:e1aad4cc5bd743d8d0b13d5cae0cef5410eaace33e83bff5fc3a139ad8db50b4" "sha256:306589c7021e6468b2656edc89f62b8ba67e8d5a1c8877e2688042263daa7a63"
], ],
"index": "pypi", "index": "pypi",
"version": "==4.11.0" "version": "==4.12.1"
}, },
"djangorestframework": { "djangorestframework": {
"hashes": [ "hashes": [
"sha256:05809fc66e1c997fd9a32ea5730d9f4ba28b109b9da71fccfa5ff241201fd0a4", "sha256:6dd02d5a4bd2516fb93f80360673bf540c3b6641fec8766b1da2870a5aa00b32",
"sha256:e782087823c47a26826ee5b6fa0c542968219263fb3976ec3c31edab23a4001f" "sha256:8b1ac62c581dbc5799b03e535854b92fc4053ecfe74bad3f9c05782063d4196b"
], ],
"index": "pypi", "index": "pypi",
"version": "==3.11.0" "version": "==3.11.1"
}, },
"djangorestframework-jwt": { "djangorestframework-jwt": {
"hashes": [ "hashes": [
...@@ -184,38 +196,50 @@ ...@@ -184,38 +196,50 @@
}, },
"idna": { "idna": {
"hashes": [ "hashes": [
"sha256:7588d1c14ae4c77d74036e8c22ff447b26d0fde8f007354fd48a7814db15b7cb", "sha256:b307872f855b18632ce0c21c5e45be78c0ea7ae4c15c828c20788b26921eb3f6",
"sha256:a068a21ceac8a4d63dbfd964670474107f541babbd2250d61922f029858365fa" "sha256:b97d804b1e9b523befed77c48dacec60e6dcb0b5391d57af6a65a312a90648c0"
], ],
"index": "pypi", "index": "pypi",
"version": "==2.9" "version": "==2.10"
},
"importlib-metadata": {
"hashes": [
"sha256:90bb658cdbbf6d1735b6341ce708fc7024a3e14e99ffdc5783edea9f9b077f83",
"sha256:dc15b2969b4ce36305c51eebe62d418ac7791e9a157911d58bfb1f9ccd8e2070"
],
"markers": "python_version < '3.8'",
"version": "==1.7.0"
}, },
"inflection": { "inflection": {
"hashes": [ "hashes": [
"sha256:18ea7fb7a7d152853386523def08736aa8c32636b047ade55f7578c4edeb16ca" "sha256:88b101b2668a1d81d6d72d4c2018e53bc6c7fc544c987849da1c7f77545c3bc9",
"sha256:f576e85132d34f5bf7df5183c2c6f94cfb32e528f53065345cf71329ba0b8924"
], ],
"version": "==0.3.1" "markers": "python_version >= '3.5'",
"version": "==0.5.0"
}, },
"itypes": { "itypes": {
"hashes": [ "hashes": [
"sha256:c6e77bb9fd68a4bfeb9d958fea421802282451a25bac4913ec94db82a899c073" "sha256:03da6872ca89d29aef62773672b2d408f490f80db48b23079a4b194c86dd04c6",
"sha256:af886f129dea4a2a1e3d36595a2d139589e4dd287f5cab0b40e799ee81570ff1"
], ],
"version": "==1.1.0" "version": "==1.2.0"
}, },
"jinja2": { "jinja2": {
"hashes": [ "hashes": [
"sha256:93187ffbc7808079673ef52771baa950426fd664d3aad1d0fa3e95644360e250", "sha256:89aab215427ef59c34ad58735269eb58b1a5808103067f7bb9d5836c651b3bb0",
"sha256:b0eaf100007721b5c16c1fc1eecb87409464edc10469ddc9a22a27a99123be49" "sha256:f0a4641d3cf955324a89c04f3d94663aa4d638abe8f733ecd3582848e1c37035"
], ],
"version": "==2.11.1" "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3, 3.4'",
"version": "==2.11.2"
}, },
"kombu": { "kombu": {
"hashes": [ "hashes": [
"sha256:2d1cda774126a044d91a7ff5fa6d09edf99f46924ab332a810760fe6740e9b76", "sha256:be48cdffb54a2194d93ad6533d73f69408486483d189fe9f5990ee24255b0e0a",
"sha256:598e7e749d6ab54f646b74b2d2df67755dee13894f73ab02a2a9feb8870c7cb2" "sha256:ca1b45faac8c0b18493d02a8571792f3c40291cf2bcf1f55afed3d8f3aa7ba74"
], ],
"index": "pypi", "index": "pypi",
"version": "==4.6.8" "version": "==4.6.11"
}, },
"markupsafe": { "markupsafe": {
"hashes": [ "hashes": [
...@@ -253,15 +277,16 @@ ...@@ -253,15 +277,16 @@
"sha256:e249096428b3ae81b08327a63a485ad0878de3fb939049038579ac0ef61e17e7", "sha256:e249096428b3ae81b08327a63a485ad0878de3fb939049038579ac0ef61e17e7",
"sha256:e8313f01ba26fbbe36c7be1966a7b7424942f670f38e666995b88d012765b9be" "sha256:e8313f01ba26fbbe36c7be1966a7b7424942f670f38e666995b88d012765b9be"
], ],
"markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'",
"version": "==1.1.1" "version": "==1.1.1"
}, },
"marshmallow": { "marshmallow": {
"hashes": [ "hashes": [
"sha256:90854221bbb1498d003a0c3cc9d8390259137551917961c8b5258c64026b2f85", "sha256:67bf4cae9d3275b3fc74bd7ff88a7c98ee8c57c94b251a67b031dc293ecc4b76",
"sha256:ac2e13b30165501b7d41fc0371b8df35944f5849769d136f20e2c5f6cdc6e665" "sha256:a2a5eefb4b75a3b43f05be1cca0b6686adf56af7465c3ca629e5ad8d1e1fe13d"
], ],
"index": "pypi", "index": "pypi",
"version": "==3.5.1" "version": "==3.7.1"
}, },
"metagenedb": { "metagenedb": {
"editable": true, "editable": true,
...@@ -269,117 +294,145 @@ ...@@ -269,117 +294,145 @@
}, },
"numpy": { "numpy": {
"hashes": [ "hashes": [
"sha256:1598a6de323508cfeed6b7cd6c4efb43324f4692e20d1f76e1feec7f59013448", "sha256:082f8d4dd69b6b688f64f509b91d482362124986d98dc7dc5f5e9f9b9c3bb983",
"sha256:1b0ece94018ae21163d1f651b527156e1f03943b986188dd81bc7e066eae9d1c", "sha256:1bc0145999e8cb8aed9d4e65dd8b139adf1919e521177f198529687dbf613065",
"sha256:2e40be731ad618cb4974d5ba60d373cdf4f1b8dcbf1dcf4d9dff5e212baf69c5", "sha256:309cbcfaa103fc9a33ec16d2d62569d541b79f828c382556ff072442226d1968",
"sha256:4ba59db1fcc27ea31368af524dcf874d9277f21fd2e1f7f1e2e0c75ee61419ed", "sha256:3673c8b2b29077f1b7b3a848794f8e11f401ba0b71c49fbd26fb40b71788b132",
"sha256:59ca9c6592da581a03d42cc4e270732552243dc45e87248aa8d636d53812f6a5", "sha256:480fdd4dbda4dd6b638d3863da3be82873bba6d32d1fc12ea1b8486ac7b8d129",
"sha256:5e0feb76849ca3e83dd396254e47c7dba65b3fa9ed3df67c2556293ae3e16de3", "sha256:56ef7f56470c24bb67fb43dae442e946a6ce172f97c69f8d067ff8550cf782ff",
"sha256:6d205249a0293e62bbb3898c4c2e1ff8a22f98375a34775a259a0523111a8f6c", "sha256:5a936fd51049541d86ccdeef2833cc89a18e4d3808fe58a8abeb802665c5af93",
"sha256:6fcc5a3990e269f86d388f165a089259893851437b904f422d301cdce4ff25c8", "sha256:5b6885c12784a27e957294b60f97e8b5b4174c7504665333c5e94fbf41ae5d6a",
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"sha256:e1b1dc0372f530f26a03578ac75d5e51b3868b9b76cd2facba4c9ee0eb252ab1",
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